| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is por [H]
Identifier: 126695906
GI number: 126695906
Start: 495967
End: 496971
Strand: Direct
Name: por [H]
Synonym: P9301_05681
Alternate gene names: 126695906
Gene position: 495967-496971 (Clockwise)
Preceding gene: 126695905
Following gene: 126695911
Centisome position: 30.21
GC content: 33.43
Gene sequence:
>1005_bases GTGAGTAAGAACATTAAGGGTTTAGTCCTCATAACAGGAACAACTTCAGGAGTTGGATTAAATACTCTAAAACCTCTTTT AAGATTTGGGTGGGAGGTTATAGCTGTTAATCGATCAAATAAAAGAGCCATTAAAATAGCTGAGGAATCTTTGACAAAAG AGGAAGTTAAAAATGTTCACTTTATAGAAATAGATCTCTCTAACTTGGATGATGTGAGAAAAGGTTGCGATGAAATATTA GAAAGATTTAAAAAACCAATAAATTCTCTTATTTGTAATGCAGCAGTTTATAAACCAAGACTAAAGAGACCTGAAAGATC TCCTCAGGGGTTTGAGAACTCTATGGCAGTAAATCATTTTGGACATTTTCTTATGATTAATCTTCTTATGGAAAATATTT TATCTTCAGAAAGAGAAATTGTTTTAAATGGAAAATCTACTTTATTCAAGCCAAGAATTACAGTATTAGGTACTGTTACA GCTAATTATTCAGAACTTGGAGGAAGAATCCCCATCCCTGCCCCAGCTGATTTGGGAGATTTGTCAGGATTCAAAAATGG TTTTTTATCCCCTATAAGTATGGCGAATGGAAAGAAATTCAAACCTGGTAAGGCTTATAAAGATAGTAAACTTTGCAATA TGGTAACCGTTCAGGAATTATCAAAAAGGTATCCTGCAGAAGAAATTATTGTAAATTCGTTATATCCTGGATGTGTCGCT GATACAAAACTTTTTAGAGATACGCCTTGGTTATTTAGGTTTCTTTTCCCTATATTTCAAAAATTCATAACGAGGGGATA TGTGTCACAAAGATTGGCAGGAGAGAGAGTAGCTAAAGTAGCAACTTATAAAGAATTTGCTAAACCATCAGTCCATTGGA GCTGGGGAAATCGTCAAAAAACTGGCAGAAAAGCTTTTTCTCAAAAGTTGTCAAAAAGAATAATTGATGCAAATACCTCT AAAAAAACTTATGATCTTACAAAACTGTTGGTCGGATTAGATTAA
Upstream 100 bases:
>100_bases GGATCAAATAATTTCTAGAGACATTATCAGGGTAATATGGCGTTGATAAGGATGATCTTGAATCATTCTTCTTTTCATTT TTCTATTAACTTTTTTGCTA
Downstream 100 bases:
>100_bases TTTAGATTAATCAAATCCTAATAAATCAAAAATTTCTCTATCTTTAAGTGGATTGCCTTCTAAAGGTTCCACCTTTTCAA GCATATTTTTAGCAAGAGAT
Product: protochlorophyllide oxidoreductase
Products: NA
Alternate protein names: PCR; NADPH-protochlorophyllide oxidoreductase; LPOR; POR [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSKNIKGLVLITGTTSGVGLNTLKPLLRFGWEVIAVNRSNKRAIKIAEESLTKEEVKNVHFIEIDLSNLDDVRKGCDEIL ERFKKPINSLICNAAVYKPRLKRPERSPQGFENSMAVNHFGHFLMINLLMENILSSEREIVLNGKSTLFKPRITVLGTVT ANYSELGGRIPIPAPADLGDLSGFKNGFLSPISMANGKKFKPGKAYKDSKLCNMVTVQELSKRYPAEEIIVNSLYPGCVA DTKLFRDTPWLFRFLFPIFQKFITRGYVSQRLAGERVAKVATYKEFAKPSVHWSWGNRQKTGRKAFSQKLSKRIIDANTS KKTYDLTKLLVGLD
Sequences:
>Translated_334_residues MSKNIKGLVLITGTTSGVGLNTLKPLLRFGWEVIAVNRSNKRAIKIAEESLTKEEVKNVHFIEIDLSNLDDVRKGCDEIL ERFKKPINSLICNAAVYKPRLKRPERSPQGFENSMAVNHFGHFLMINLLMENILSSEREIVLNGKSTLFKPRITVLGTVT ANYSELGGRIPIPAPADLGDLSGFKNGFLSPISMANGKKFKPGKAYKDSKLCNMVTVQELSKRYPAEEIIVNSLYPGCVA DTKLFRDTPWLFRFLFPIFQKFITRGYVSQRLAGERVAKVATYKEFAKPSVHWSWGNRQKTGRKAFSQKLSKRIIDANTS KKTYDLTKLLVGLD >Mature_333_residues SKNIKGLVLITGTTSGVGLNTLKPLLRFGWEVIAVNRSNKRAIKIAEESLTKEEVKNVHFIEIDLSNLDDVRKGCDEILE RFKKPINSLICNAAVYKPRLKRPERSPQGFENSMAVNHFGHFLMINLLMENILSSEREIVLNGKSTLFKPRITVLGTVTA NYSELGGRIPIPAPADLGDLSGFKNGFLSPISMANGKKFKPGKAYKDSKLCNMVTVQELSKRYPAEEIIVNSLYPGCVAD TKLFRDTPWLFRFLFPIFQKFITRGYVSQRLAGERVAKVATYKEFAKPSVHWSWGNRQKTGRKAFSQKLSKRIIDANTSK KTYDLTKLLVGLD
Specific function: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily [H]
Homologues:
Organism=Homo sapiens, GI7706523, Length=260, Percent_Identity=26.9230769230769, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI10190746, Length=341, Percent_Identity=26.9794721407625, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI193804850, Length=255, Percent_Identity=26.2745098039216, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI193207620, Length=259, Percent_Identity=29.3436293436293, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17532805, Length=238, Percent_Identity=29.8319327731092, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17505416, Length=271, Percent_Identity=28.7822878228782, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17532791, Length=260, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71992402, Length=312, Percent_Identity=25.9615384615385, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17535059, Length=242, Percent_Identity=26.8595041322314, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI32565532, Length=124, Percent_Identity=37.0967741935484, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI20129347, Length=264, Percent_Identity=28.7878787878788, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI22024069, Length=246, Percent_Identity=27.6422764227642, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24586328, Length=255, Percent_Identity=27.4509803921569, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI161076371, Length=245, Percent_Identity=31.8367346938775, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR005979 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.33 [H]
Molecular weight: Translated: 37604; Mature: 37473
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNIKGLVLITGTTSGVGLNTLKPLLRFGWEVIAVNRSNKRAIKIAEESLTKEEVKNVH CCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEEHHHHHHHHHHHCCEE FIEIDLSNLDDVRKGCDEILERFKKPINSLICNAAVYKPRLKRPERSPQGFENSMAVNHF EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHH GHFLMINLLMENILSSEREIVLNGKSTLFKPRITVLGTVTANYSELGGRIPIPAPADLGD HHHHHHHHHHHHHHCCCCEEEECCCCCEECCCEEEEEEEECCHHHCCCCCCCCCCCCCHH LSGFKNGFLSPISMANGKKFKPGKAYKDSKLCNMVTVQELSKRYPAEEIIVNSLYPGCVA HHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHH DTKLFRDTPWLFRFLFPIFQKFITRGYVSQRLAGERVAKVATYKEFAKPSVHWSWGNRQK CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH TGRKAFSQKLSKRIIDANTSKKTYDLTKLLVGLD HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SKNIKGLVLITGTTSGVGLNTLKPLLRFGWEVIAVNRSNKRAIKIAEESLTKEEVKNVH CCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEEHHHHHHHHHHHCCEE FIEIDLSNLDDVRKGCDEILERFKKPINSLICNAAVYKPRLKRPERSPQGFENSMAVNHF EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHH GHFLMINLLMENILSSEREIVLNGKSTLFKPRITVLGTVTANYSELGGRIPIPAPADLGD HHHHHHHHHHHHHHCCCCEEEECCCCCEECCCEEEEEEEECCHHHCCCCCCCCCCCCCHH LSGFKNGFLSPISMANGKKFKPGKAYKDSKLCNMVTVQELSKRYPAEEIIVNSLYPGCVA HHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHH DTKLFRDTPWLFRFLFPIFQKFITRGYVSQRLAGERVAKVATYKEFAKPSVHWSWGNRQK CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH TGRKAFSQKLSKRIIDANTSKKTYDLTKLLVGLD HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9559561 [H]