| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is gltX [H]
Identifier: 126695836
GI number: 126695836
Start: 434230
End: 435660
Strand: Reverse
Name: gltX [H]
Synonym: P9301_04981
Alternate gene names: 126695836
Gene position: 435660-434230 (Counterclockwise)
Preceding gene: 126695837
Following gene: 126695832
Centisome position: 26.53
GC content: 32.08
Gene sequence:
>1431_bases TTGGAAAAACGTTTAAGACTAGCCCCGAGTCCAACGGGTTTATTTCATATTGGGACAGCACGAACAGCACTATTCAATTG GTTGTATGCACAAAAAATAGGTGGAAAATTTCTTATCAGAATAGAAGATACAGATTTTCTTCGATCTAAATCTGAATATA CAAAAAATATATTAGAAGGCTTGAAATGGCTTGGGCTTAAATGGGATGAAGAACCTATAAAGCAAAGTGACCGAATTTCG ATTCACAAAAGTTATATCAAAAAACTATTGGAATGTGGAGCTGCATATAGGTGCTTTACATCAGAAGATGAAATATCTGA ATTAAGAGAAGAACAAAAAAAGAAAGGATTACCTCCAAAGCATGATAATAGACACAGAAGTCTTTCAAAAGAAGAAATAG AAACATTCATATCCCAAGGGCGGACTTCGGTAATAAGATTTAAGATTGATGAAAAAATTGAAATTAAATGGATAGATCAG ATAAGAGGCGAAATCAAATGGCAAGGTAAGGATTTGGGCGGTGATTTAGTTTTATCAAGAAGGGCTAAGGGATATGAGAT TGGTGATCCTTTGTATAATCTTGCAGTAGTAGTTGATGATAATTTCATGAATATTACTCACGTTGTAAGGGGTGAAGACC ATATCTCGAACACTGCAAAACAAATATTGATTTATAAAGCATTAAATTTTAATTTACCAACTTTTTCGCATACACCCTTA ATACTGAATAGCGAAGGGAAAAAATTATCTAAGAGAGATTGCGTTACTTCAATCGACGAATTTAGAGAAATGGGATATTT ACCTGAGGCCCTATCGAACTATATGGCATTTTTAGGTTGGTCTCCAAAATCTGCCGACAGAGAAATACTTTCTCTTGAAG AGATATCTAAAATTTTTGACTTATCAGAAATAAATAAAGCTGGAGCCAAATTTAGTTGGGAAAAACTCAACTGGATTAAT TCTCAATATATAAAAAATATTGAATCAATTAAGTTAATTGAGATCATGAGAAAATACTGGGACGACAATGGTTGGAAGCC GCCATCTGAAGAATGGGCTAATAAATTAGCAATTTTGATTAGAGACTCTATGACTCTTTTAAAAGATTCAATTGATCAAT CAAAACCATTTTTCTTGATACCTACAATTCAAAAAGAAGGTCAAGATTTTCTGGAAATCCGGGAAAGCAAATTATCTTTA AAACTAATCTTAAATTATTTAATTGAGAAAAATACTATAAAACTAAATAAAGAGAAAGCCAAAGAAATAATAAACGAAAT CTCAAAAAAGCATAATATTAAAAAAGGGATATTAATGAAATCACTAAGAGTAGCCTTTTTTGGATCTCTCAGTGGGCCAG ATTTAATTCAAAGTTGGGAGCTTTTCGCAGAAAGTAAAACTGATAGAACTCGAATTGAAAGATGTCTTTAA
Upstream 100 bases:
>100_bases CAAAACTCTGGGACCGTAGTTCAACTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAATCCCGTCGGTC CCGTTTTTTCTAAAAGAAAT
Downstream 100 bases:
>100_bases TCAATCAAAATTATTTTTTTGGCCTAATTTAAGTCTATTTACCAAAGGTTTAGCTGAAAGTCCTTGTATTCCTACTGTCA TCAAAATAGTAAGAAAAACT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MEKRLRLAPSPTGLFHIGTARTALFNWLYAQKIGGKFLIRIEDTDFLRSKSEYTKNILEGLKWLGLKWDEEPIKQSDRIS IHKSYIKKLLECGAAYRCFTSEDEISELREEQKKKGLPPKHDNRHRSLSKEEIETFISQGRTSVIRFKIDEKIEIKWIDQ IRGEIKWQGKDLGGDLVLSRRAKGYEIGDPLYNLAVVVDDNFMNITHVVRGEDHISNTAKQILIYKALNFNLPTFSHTPL ILNSEGKKLSKRDCVTSIDEFREMGYLPEALSNYMAFLGWSPKSADREILSLEEISKIFDLSEINKAGAKFSWEKLNWIN SQYIKNIESIKLIEIMRKYWDDNGWKPPSEEWANKLAILIRDSMTLLKDSIDQSKPFFLIPTIQKEGQDFLEIRESKLSL KLILNYLIEKNTIKLNKEKAKEIINEISKKHNIKKGILMKSLRVAFFGSLSGPDLIQSWELFAESKTDRTRIERCL
Sequences:
>Translated_476_residues MEKRLRLAPSPTGLFHIGTARTALFNWLYAQKIGGKFLIRIEDTDFLRSKSEYTKNILEGLKWLGLKWDEEPIKQSDRIS IHKSYIKKLLECGAAYRCFTSEDEISELREEQKKKGLPPKHDNRHRSLSKEEIETFISQGRTSVIRFKIDEKIEIKWIDQ IRGEIKWQGKDLGGDLVLSRRAKGYEIGDPLYNLAVVVDDNFMNITHVVRGEDHISNTAKQILIYKALNFNLPTFSHTPL ILNSEGKKLSKRDCVTSIDEFREMGYLPEALSNYMAFLGWSPKSADREILSLEEISKIFDLSEINKAGAKFSWEKLNWIN SQYIKNIESIKLIEIMRKYWDDNGWKPPSEEWANKLAILIRDSMTLLKDSIDQSKPFFLIPTIQKEGQDFLEIRESKLSL KLILNYLIEKNTIKLNKEKAKEIINEISKKHNIKKGILMKSLRVAFFGSLSGPDLIQSWELFAESKTDRTRIERCL >Mature_476_residues MEKRLRLAPSPTGLFHIGTARTALFNWLYAQKIGGKFLIRIEDTDFLRSKSEYTKNILEGLKWLGLKWDEEPIKQSDRIS IHKSYIKKLLECGAAYRCFTSEDEISELREEQKKKGLPPKHDNRHRSLSKEEIETFISQGRTSVIRFKIDEKIEIKWIDQ IRGEIKWQGKDLGGDLVLSRRAKGYEIGDPLYNLAVVVDDNFMNITHVVRGEDHISNTAKQILIYKALNFNLPTFSHTPL ILNSEGKKLSKRDCVTSIDEFREMGYLPEALSNYMAFLGWSPKSADREILSLEEISKIFDLSEINKAGAKFSWEKLNWIN SQYIKNIESIKLIEIMRKYWDDNGWKPPSEEWANKLAILIRDSMTLLKDSIDQSKPFFLIPTIQKEGQDFLEIRESKLSL KLILNYLIEKNTIKLNKEKAKEIINEISKKHNIKKGILMKSLRVAFFGSLSGPDLIQSWELFAESKTDRTRIERCL
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=334, Percent_Identity=34.4311377245509, Blast_Score=208, Evalue=1e-53, Organism=Escherichia coli, GI1788743, Length=463, Percent_Identity=35.6371490280778, Blast_Score=281, Evalue=5e-77, Organism=Escherichia coli, GI226510925, Length=253, Percent_Identity=32.4110671936759, Blast_Score=125, Evalue=7e-30, Organism=Caenorhabditis elegans, GI71993394, Length=479, Percent_Identity=31.1064718162839, Blast_Score=206, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6324540, Length=333, Percent_Identity=40.2402402402402, Blast_Score=234, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6321192, Length=229, Percent_Identity=27.9475982532751, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24665321, Length=492, Percent_Identity=32.9268292682927, Blast_Score=241, Evalue=1e-63,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 55324; Mature: 55324
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKRLRLAPSPTGLFHIGTARTALFNWLYAQKIGGKFLIRIEDTDFLRSKSEYTKNILEG CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH LKWLGLKWDEEPIKQSDRISIHKSYIKKLLECGAAYRCFTSEDEISELREEQKKKGLPPK HHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCCC HDNRHRSLSKEEIETFISQGRTSVIRFKIDEKIEIKWIDQIRGEIKWQGKDLGGDLVLSR CCCHHHCCCHHHHHHHHHCCCCEEEEEEECCEEEEEEHHHHCCEEEECCCCCCCHHEEEC RAKGYEIGDPLYNLAVVVDDNFMNITHVVRGEDHISNTAKQILIYKALNFNLPTFSHTPL CCCCCCCCCCCEEEEEEEECCCEEEHEEECCCHHHHHHHHHHHHEEEECCCCCCCCCCCE ILNSEGKKLSKRDCVTSIDEFREMGYLPEALSNYMAFLGWSPKSADREILSLEEISKIFD EECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LSEINKAGAKFSWEKLNWINSQYIKNIESIKLIEIMRKYWDDNGWKPPSEEWANKLAILI HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEHHH RDSMTLLKDSIDQSKPFFLIPTIQKEGQDFLEIRESKLSLKLILNYLIEKNTIKLNKEKA HHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHH KEIINEISKKHNIKKGILMKSLRVAFFGSLSGPDLIQSWELFAESKTDRTRIERCL HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MEKRLRLAPSPTGLFHIGTARTALFNWLYAQKIGGKFLIRIEDTDFLRSKSEYTKNILEG CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH LKWLGLKWDEEPIKQSDRISIHKSYIKKLLECGAAYRCFTSEDEISELREEQKKKGLPPK HHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCCC HDNRHRSLSKEEIETFISQGRTSVIRFKIDEKIEIKWIDQIRGEIKWQGKDLGGDLVLSR CCCHHHCCCHHHHHHHHHCCCCEEEEEEECCEEEEEEHHHHCCEEEECCCCCCCHHEEEC RAKGYEIGDPLYNLAVVVDDNFMNITHVVRGEDHISNTAKQILIYKALNFNLPTFSHTPL CCCCCCCCCCCEEEEEEEECCCEEEHEEECCCHHHHHHHHHHHHEEEECCCCCCCCCCCE ILNSEGKKLSKRDCVTSIDEFREMGYLPEALSNYMAFLGWSPKSADREILSLEEISKIFD EECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LSEINKAGAKFSWEKLNWINSQYIKNIESIKLIEIMRKYWDDNGWKPPSEEWANKLAILI HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEHHH RDSMTLLKDSIDQSKPFFLIPTIQKEGQDFLEIRESKLSLKLILNYLIEKNTIKLNKEKA HHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHH KEIINEISKKHNIKKGILMKSLRVAFFGSLSGPDLIQSWELFAESKTDRTRIERCL HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA