| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is yloA [H]
Identifier: 126695829
GI number: 126695829
Start: 428471
End: 430171
Strand: Reverse
Name: yloA [H]
Synonym: P9301_04911
Alternate gene names: 126695829
Gene position: 430171-428471 (Counterclockwise)
Preceding gene: 126695831
Following gene: 126695828
Centisome position: 26.2
GC content: 28.75
Gene sequence:
>1701_bases ATGGATATTACATCTATTAGATCTGTCTTGCATTATTTGACAAAGAACATCTTACCTACAAAGTTTGAGACTGCCCAACA ACCAGAGCCTAATACAATTCAATTATGTTTTAGAGGAGTTGATTCTCAAACATGGTTAGAAGTTTCATGGAATGGAGACT CCCCAAGAATACTAAAGATAAATAAGCCAGAAAAGATTGGGAGAGAAAGCACACTTTCTAAACAAATAAGATACGGATTA AAGTATATGGCTTTAATTTCGATTGATCAAGATGATTTCGAGAGAGTTATTAAATTTAGTTTTGCGAAAAAACCTGGAGA TGAAATTAATAAGTATTTAATTTTTGAATTAATGGGAAAACATAGTAATATTTTTTATCTGGATAATAAACATAAAATAA TTGCCGTTGGTAAACAAATTAAATCAAGTCAATCTAGTTTTAGAACAATTTCAACAGGATCAATTTATTCTGGCCCTCCA GTCAATCTCAAAAAACAACCTAGAGAAGATGAGTCTTTTCAATCATGGAAAGACTCAATTTCAATAGTACCTGAGTCTTT GAAATACTGTTTAATAAATACCTATCAAGGAGTAAGCCCTATCCTCACAAAACAATTAGAGTTTGTTAGCGCAACTGTTA ATTCAGGAATAATGGGAAAAAATATTGATTTCATTAGCAACTCAGACTTAAAGGAGATATTTAAAAATTGGAAGATTTGG ATAAACAGGTTTAAAAACAATAACTTTAATTTTTCTATATTCAACAAAGATTTTTATTGCGTTTGGTTTTTTGATAAGGA AATTAATTTCGAAAATAAAAAAGATTTATGCACAAGCTTAGAAAATTATTATGATTATCATCTGAAACAAAAAAAACTTG AATTATTGGAAAAGAAAATTGAAGGGATAATTTTTAAACAGTCCAATACTGAGAAAAAGAATTTAAATATTCAATCTGAT CTTCTGACAAAATCAGAAAACTACGAGAAATATAAAGAAAAAGCTGATAATATATTTGCCTCACATGAAATTAAAAAACA AGACATTATAAAGGGACAAAAACTATATAAAAAATCAAAAAAACTAAAGAGATCTAGAGAATTAATAAAAGAAAGATTAA GTATTTACAAAACAAATATAGAGAGATTAGACGAATTCACAACGCTTCTAGAAAATTTAAATTCTTTAAATCATGAAAAA CTTTCTATGAGAATCAAACTTCTAGAAGAAATTATGGAAGAAATTTGTAACGAGTTTAATATCAATATCAAGAAGCAAAG AGAAGATCAGAAAAGTACATATGAGATAGAGTCTTCACCAATTCAAGTTGACACTCCCACAGGATTAAAGCTTCAGGTAG GGCGAAATATGAGGCAAAATGATTTAATAAGCTTTAAATTCTCAAAAAAAGGCGATTTATGGTTTCATGCACAGGAATCA CCAGGCAGTCATGTAGTTTTGAAGTCTTCATCTCAAGTAGCATCTGAACAAGATCTTCAAATAGCTGCAGATTTAGCTGC TTTATTTAGTAAGGCAAAAAGAAACATTAAAGTTCCAATTAATTTAGTAAGGATTAAAGATTTACAAAAAATCAAAAACG GAGGACCAGGTTGCGTTTCCTTTAAAAATGGAGAAATTATTTGGGGAAATCCTACAAGAGGAGAAGATTACATTAAAAAA AATCTTAAAACAGTAATTTAG
Upstream 100 bases:
>100_bases GATAATAAGTTTTTTTTGATTTTTCATATGAAATTTTTTACAGTAAAATAAACTTCTTGTGAATTAAAAAGGAATAATGC AGAAAGGTGTTCCACAGATA
Downstream 100 bases:
>100_bases TTTATAATAAAAAAAATTTTTAAATCTAAATGTTTGATTTTCTTTTAGGCACTCATGAATTTTTAGGAAATCATAGTTTT CCAGAATTTATTGTTGGATA
Product: secreted protein MPB70 precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MDITSIRSVLHYLTKNILPTKFETAQQPEPNTIQLCFRGVDSQTWLEVSWNGDSPRILKINKPEKIGRESTLSKQIRYGL KYMALISIDQDDFERVIKFSFAKKPGDEINKYLIFELMGKHSNIFYLDNKHKIIAVGKQIKSSQSSFRTISTGSIYSGPP VNLKKQPREDESFQSWKDSISIVPESLKYCLINTYQGVSPILTKQLEFVSATVNSGIMGKNIDFISNSDLKEIFKNWKIW INRFKNNNFNFSIFNKDFYCVWFFDKEINFENKKDLCTSLENYYDYHLKQKKLELLEKKIEGIIFKQSNTEKKNLNIQSD LLTKSENYEKYKEKADNIFASHEIKKQDIIKGQKLYKKSKKLKRSRELIKERLSIYKTNIERLDEFTTLLENLNSLNHEK LSMRIKLLEEIMEEICNEFNINIKKQREDQKSTYEIESSPIQVDTPTGLKLQVGRNMRQNDLISFKFSKKGDLWFHAQES PGSHVVLKSSSQVASEQDLQIAADLAALFSKAKRNIKVPINLVRIKDLQKIKNGGPGCVSFKNGEIIWGNPTRGEDYIKK NLKTVI
Sequences:
>Translated_566_residues MDITSIRSVLHYLTKNILPTKFETAQQPEPNTIQLCFRGVDSQTWLEVSWNGDSPRILKINKPEKIGRESTLSKQIRYGL KYMALISIDQDDFERVIKFSFAKKPGDEINKYLIFELMGKHSNIFYLDNKHKIIAVGKQIKSSQSSFRTISTGSIYSGPP VNLKKQPREDESFQSWKDSISIVPESLKYCLINTYQGVSPILTKQLEFVSATVNSGIMGKNIDFISNSDLKEIFKNWKIW INRFKNNNFNFSIFNKDFYCVWFFDKEINFENKKDLCTSLENYYDYHLKQKKLELLEKKIEGIIFKQSNTEKKNLNIQSD LLTKSENYEKYKEKADNIFASHEIKKQDIIKGQKLYKKSKKLKRSRELIKERLSIYKTNIERLDEFTTLLENLNSLNHEK LSMRIKLLEEIMEEICNEFNINIKKQREDQKSTYEIESSPIQVDTPTGLKLQVGRNMRQNDLISFKFSKKGDLWFHAQES PGSHVVLKSSSQVASEQDLQIAADLAALFSKAKRNIKVPINLVRIKDLQKIKNGGPGCVSFKNGEIIWGNPTRGEDYIKK NLKTVI >Mature_566_residues MDITSIRSVLHYLTKNILPTKFETAQQPEPNTIQLCFRGVDSQTWLEVSWNGDSPRILKINKPEKIGRESTLSKQIRYGL KYMALISIDQDDFERVIKFSFAKKPGDEINKYLIFELMGKHSNIFYLDNKHKIIAVGKQIKSSQSSFRTISTGSIYSGPP VNLKKQPREDESFQSWKDSISIVPESLKYCLINTYQGVSPILTKQLEFVSATVNSGIMGKNIDFISNSDLKEIFKNWKIW INRFKNNNFNFSIFNKDFYCVWFFDKEINFENKKDLCTSLENYYDYHLKQKKLELLEKKIEGIIFKQSNTEKKNLNIQSD LLTKSENYEKYKEKADNIFASHEIKKQDIIKGQKLYKKSKKLKRSRELIKERLSIYKTNIERLDEFTTLLENLNSLNHEK LSMRIKLLEEIMEEICNEFNINIKKQREDQKSTYEIESSPIQVDTPTGLKLQVGRNMRQNDLISFKFSKKGDLWFHAQES PGSHVVLKSSSQVASEQDLQIAADLAALFSKAKRNIKVPINLVRIKDLQKIKNGGPGCVSFKNGEIIWGNPTRGEDYIKK NLKTVI
Specific function: Unknown
COG id: COG1293
COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SDCCAG1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008532 - InterPro: IPR008616 [H]
Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]
EC number: NA
Molecular weight: Translated: 65824; Mature: 65824
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDITSIRSVLHYLTKNILPTKFETAQQPEPNTIQLCFRGVDSQTWLEVSWNGDSPRILKI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEE NKPEKIGRESTLSKQIRYGLKYMALISIDQDDFERVIKFSFAKKPGDEINKYLIFELMGK CCCHHHCCHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC HSNIFYLDNKHKIIAVGKQIKSSQSSFRTISTGSIYSGPPVNLKKQPREDESFQSWKDSI CCCEEEEECCCEEEEECHHHHCCHHHCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH SIVPESLKYCLINTYQGVSPILTKQLEFVSATVNSGIMGKNIDFISNSDLKEIFKNWKIW HHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH INRFKNNNFNFSIFNKDFYCVWFFDKEINFENKKDLCTSLENYYDYHLKQKKLELLEKKI HHHHCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGIIFKQSNTEKKNLNIQSDLLTKSENYEKYKEKADNIFASHEIKKQDIIKGQKLYKKSK CEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHH KLKRSRELIKERLSIYKTNIERLDEFTTLLENLNSLNHEKLSMRIKLLEEIMEEICNEFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC INIKKQREDQKSTYEIESSPIQVDTPTGLKLQVGRNMRQNDLISFKFSKKGDLWFHAQES CCEEECCCCCCCCEEECCCCEEEECCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCC PGSHVVLKSSSQVASEQDLQIAADLAALFSKAKRNIKVPINLVRIKDLQKIKNGGPGCVS CCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHCCCEECCEEEEEHHHHHHHHCCCCCEEE FKNGEIIWGNPTRGEDYIKKNLKTVI ECCCEEEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure MDITSIRSVLHYLTKNILPTKFETAQQPEPNTIQLCFRGVDSQTWLEVSWNGDSPRILKI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEE NKPEKIGRESTLSKQIRYGLKYMALISIDQDDFERVIKFSFAKKPGDEINKYLIFELMGK CCCHHHCCHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC HSNIFYLDNKHKIIAVGKQIKSSQSSFRTISTGSIYSGPPVNLKKQPREDESFQSWKDSI CCCEEEEECCCEEEEECHHHHCCHHHCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH SIVPESLKYCLINTYQGVSPILTKQLEFVSATVNSGIMGKNIDFISNSDLKEIFKNWKIW HHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH INRFKNNNFNFSIFNKDFYCVWFFDKEINFENKKDLCTSLENYYDYHLKQKKLELLEKKI HHHHCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGIIFKQSNTEKKNLNIQSDLLTKSENYEKYKEKADNIFASHEIKKQDIIKGQKLYKKSK CEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHH KLKRSRELIKERLSIYKTNIERLDEFTTLLENLNSLNHEKLSMRIKLLEEIMEEICNEFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC INIKKQREDQKSTYEIESSPIQVDTPTGLKLQVGRNMRQNDLISFKFSKKGDLWFHAQES CCEEECCCCCCCCEEECCCCEEEECCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCC PGSHVVLKSSSQVASEQDLQIAADLAALFSKAKRNIKVPINLVRIKDLQKIKNGGPGCVS CCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHCCCEECCEEEEEHHHHHHHHCCCCCEEE FKNGEIIWGNPTRGEDYIKKNLKTVI ECCCEEEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9534248 [H]