| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695725
Identifier: 126695725
GI number: 126695725
Start: 343981
End: 344841
Strand: Reverse
Name: 126695725
Synonym: P9301_03871
Alternate gene names: NA
Gene position: 344841-343981 (Counterclockwise)
Preceding gene: 126695726
Following gene: 126695724
Centisome position: 21.0
GC content: 26.83
Gene sequence:
>861_bases ATGAAAAATGTAATGATGCTAATTAGAAGTTTTTTTCTATTAAGACCAAGAATTTTATCCACTATATTTTTTATTCCTAT TCTTTATGGCATTGGCTGGGCTTTGTCTCAGCCACTTTTATTGTTTAATTTTGAAAAAGAAAATTTATCCTTAATTGGTA CTATTATTACTTTCTTACTTTTTATCTTTTTACTCCCATATTGGTTTTATATCAAACGAAACAAATCTAGTGCTTGGATA CTTCTTGGGATAACAAAAGACAAATTCTTAAAAAACTTTTTCAATTTTTCTCAAGGTATTTTATTTGCTTTAGTTTTAAT AATTCTAATTCTGGTACCACTATTGCAAAAAAATTATATTTCTTGGATAGGTGAATTCTCACCAATAATATTGTTAAATT CTATTGTCCTGGGATTAGGTGTTGGATTCGCAGAAGAAATAATTTTTAGAGGCTGGTTACTAGAAGAATTAAAATTTGAA TATAGCACAAAAATATCAATATCTTTACAAGCTATAATTTTTAGCTTCGTTCATAATTTATCAAATGAGGTATTTTGGAA CATAGTAGGATTACGTTTGGGATTTATTTTACTTGGGATATTTCTATCATTAGTAAAAATTAGAGATAAAGGTTCTTTAT GGAATTCCATCGGAATTCATGGAGGACTTGTTGGTATTTGGTTTTTATTAAATAACGGATTAATAGAATTCAAAGAAAAT ACACCTTCTTTTTTAGCAGGGCCTTTTACACAAAATATTCCAAACCCAATCGGAAGCTTTAGTGCAATTTTAATATTACT TTTGTTGTGTTTTTTTTACACATTAAAATCAATAAAGATTTTTAATAGACGCTTAAATTAG
Upstream 100 bases:
>100_bases AAAACATAAAGTATAGTAAAAAGAAAAAGCTAAAACTTTTTGAACAAGTAGTTAGAATAATAAGAGACAATGGCTGGGGT TAATTAATATTCAAACTAAA
Downstream 100 bases:
>100_bases ATATAAATACCGATTGATTTTTGATTAGTAATTGTCAGATTAAAATAAAGCTTAATACTCATATGAACTTTGAGGCAGGA ATAAGATTTATTGTATTTTT
Product: abortive infection protein
Products: NA
Alternate protein names: Metal-Dependent Membrane Protease; CAAX Amino Terminal Protease Family Protein; Caax Amino Protease Family Protein; CAAX Amino Protease
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKNVMMLIRSFFLLRPRILSTIFFIPILYGIGWALSQPLLLFNFEKENLSLIGTIITFLLFIFLLPYWFYIKRNKSSAWI LLGITKDKFLKNFFNFSQGILFALVLIILILVPLLQKNYISWIGEFSPIILLNSIVLGLGVGFAEEIIFRGWLLEELKFE YSTKISISLQAIIFSFVHNLSNEVFWNIVGLRLGFILLGIFLSLVKIRDKGSLWNSIGIHGGLVGIWFLLNNGLIEFKEN TPSFLAGPFTQNIPNPIGSFSAILILLLLCFFYTLKSIKIFNRRLN
Sequences:
>Translated_286_residues MKNVMMLIRSFFLLRPRILSTIFFIPILYGIGWALSQPLLLFNFEKENLSLIGTIITFLLFIFLLPYWFYIKRNKSSAWI LLGITKDKFLKNFFNFSQGILFALVLIILILVPLLQKNYISWIGEFSPIILLNSIVLGLGVGFAEEIIFRGWLLEELKFE YSTKISISLQAIIFSFVHNLSNEVFWNIVGLRLGFILLGIFLSLVKIRDKGSLWNSIGIHGGLVGIWFLLNNGLIEFKEN TPSFLAGPFTQNIPNPIGSFSAILILLLLCFFYTLKSIKIFNRRLN >Mature_286_residues MKNVMMLIRSFFLLRPRILSTIFFIPILYGIGWALSQPLLLFNFEKENLSLIGTIITFLLFIFLLPYWFYIKRNKSSAWI LLGITKDKFLKNFFNFSQGILFALVLIILILVPLLQKNYISWIGEFSPIILLNSIVLGLGVGFAEEIIFRGWLLEELKFE YSTKISISLQAIIFSFVHNLSNEVFWNIVGLRLGFILLGIFLSLVKIRDKGSLWNSIGIHGGLVGIWFLLNNGLIEFKEN TPSFLAGPFTQNIPNPIGSFSAILILLLLCFFYTLKSIKIFNRRLN
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32888; Mature: 32888
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVMMLIRSFFLLRPRILSTIFFIPILYGIGWALSQPLLLFNFEKENLSLIGTIITFLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHH FIFLLPYWFYIKRNKSSAWILLGITKDKFLKNFFNFSQGILFALVLIILILVPLLQKNYI HHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWIGEFSPIILLNSIVLGLGVGFAEEIIFRGWLLEELKFEYSTKISISLQAIIFSFVHNL HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHH SNEVFWNIVGLRLGFILLGIFLSLVKIRDKGSLWNSIGIHGGLVGIWFLLNNGLIEFKEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCEEEECCC TPSFLAGPFTQNIPNPIGSFSAILILLLLCFFYTLKSIKIFNRRLN CCCCEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNVMMLIRSFFLLRPRILSTIFFIPILYGIGWALSQPLLLFNFEKENLSLIGTIITFLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHH FIFLLPYWFYIKRNKSSAWILLGITKDKFLKNFFNFSQGILFALVLIILILVPLLQKNYI HHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWIGEFSPIILLNSIVLGLGVGFAEEIIFRGWLLEELKFEYSTKISISLQAIIFSFVHNL HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHH SNEVFWNIVGLRLGFILLGIFLSLVKIRDKGSLWNSIGIHGGLVGIWFLLNNGLIEFKEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCEEEECCC TPSFLAGPFTQNIPNPIGSFSAILILLLLCFFYTLKSIKIFNRRLN CCCCEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA