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The map label for this gene is crtI [H]

Identifier: 126695708

GI number: 126695708

Start: 336484

End: 338013

Strand: Reverse

Name: crtI [H]

Synonym: P9301_03701

Alternate gene names: 126695708

Gene position: 338013-336484 (Counterclockwise)

Preceding gene: 126695709

Following gene: 126695707

Centisome position: 20.59

GC content: 33.92

Gene sequence:

>1530_bases
ATGGAAATGTATGATGTTGTAATAGTTGGTAGTGGAATAGGAGGATTATGTTGCGGTTCGATTCTCGCTTTATCAGGTAA
AAAGGTACTTATATGTGAAGCACATACCCGACCGGGAGGTGTTGCCCACAGTTTCCAAAGGAAAGGTTACACTTTCGAAT
CAGGTCCTTCATTGTGGAGTGGAATAGGTAAGTGGCCGACGACTAATCCCTTAGGGCAAATTCTTAAATTACTTGATGAA
GAAGTTGAACTATTTCAATACAAAGGCTGGAGAGTAATTGTCCCAGAAGGTAATTTTAATCTTAATGTGGGGGAAGAACC
CTTTAAACAAACAATTAAAACTTTAAGAGGTGAGAAATCTGTTAAAGAATGGGAATCATTTATTTCCGGAATAAAACCTC
TTAGCCAAATAATAAATGAAATACCTTTACTCTCATTTTGTCCCGAATCAATAAATTTCTTAGATCTAATAAATTTAACC
TCAAAATTTTTACCTAATATCAAGCAAATACCAAAAATTAATAAGGGCTTTGGGAAATTAGTAAATAATCATCTAGAGGA
TCCTTTTCTGAGAAATTGGGTTGATTTATTGAGCTTTTTGATAAGTGGTATGTCAATGCATGATACAAATACAGCAGCGA
TGGCTACTTTATTTAACGAATGGTTTGAACCAAATTCATACCTTGAATACCCTAAAGGAGGTAGTGAATCTATCGTAAAA
GCCTTAATTAATGGATTTAAAAAAAATGGAGGAGAATTAATTCTCTCTTCGAAAGTAAAGACAATTAACTTCAATAAAAA
TTTTGCGACAGGTATAGCTCTCGATAATGGGTCTAGCTATAGTTGTAATTCTGTTGTCACGAATACTGATGTTTGGAATT
TAAAAAAGTTAATTCCAAATGAAATTTCAAAAAAATGGAATACAAAAGTTTTGAACCCTAATAAATGTGATTCTTTCCTT
CATATACATCTAGGTTTTGATGCTGATGGTCTTGAAGATTTGCCAATACATGCAATACATGTTGATAAATGGGAAAAAGG
TATAACCGCAGAAAGAAATATAGCTGTATTTTCAATCCCATCTGTTTTAGATAAGAATATGGCTCCTAAAGGGAAACATG
TTCTTCATGGCTATACTCCCGCAAATGAACCATGGGAAATTTGGGAAAACCTAAATCCGAAGGAATTAGAATATAGAAAT
TTGAAAGAAGAAAGATGTTCAATATTCCTTAATGCGGTGCGAAAATTCATTCCTGACATAGATGAAAGGATTGATTTAAA
GATGCTAGGAACCCCAATAACCCATAAAAAATTCACCAATACCCATTGCGGTAGTTACGGTCCTGCAATATCTGCAGCAA
AAGGTCTTTTCCCAGGCTGCAAAACTCCAGTGAAAAATTTATTTACTTGCGGTGCAAGTACATTTCCAGGTATTGGAATT
CCTGCCGTTTCAGCAAGTGGTGCTTACGCAGCTGAAAAAATTATTGGTAAAAAAGAATTTAAAACTCTTATTAAGAAAAT
AAATTTATGA

Upstream 100 bases:

>100_bases
CTTACATATTCTTCCTAGCTGTTGTACTAAGTATTACAACTTCAACTAATACATTTGTTTAAAAAAAATTAGTTTTCTAG
AAGAGTAAAGCAAATATTTA

Downstream 100 bases:

>100_bases
ATCAATTTCGTTTTATAACTCTAGATCACTTAGTTAAGAAATAAGAATAAAGAAAGCAAAAACGTTCAATAATGATAATC
TTTATCTGAACATAAACTTA

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MEMYDVVIVGSGIGGLCCGSILALSGKKVLICEAHTRPGGVAHSFQRKGYTFESGPSLWSGIGKWPTTNPLGQILKLLDE
EVELFQYKGWRVIVPEGNFNLNVGEEPFKQTIKTLRGEKSVKEWESFISGIKPLSQIINEIPLLSFCPESINFLDLINLT
SKFLPNIKQIPKINKGFGKLVNNHLEDPFLRNWVDLLSFLISGMSMHDTNTAAMATLFNEWFEPNSYLEYPKGGSESIVK
ALINGFKKNGGELILSSKVKTINFNKNFATGIALDNGSSYSCNSVVTNTDVWNLKKLIPNEISKKWNTKVLNPNKCDSFL
HIHLGFDADGLEDLPIHAIHVDKWEKGITAERNIAVFSIPSVLDKNMAPKGKHVLHGYTPANEPWEIWENLNPKELEYRN
LKEERCSIFLNAVRKFIPDIDERIDLKMLGTPITHKKFTNTHCGSYGPAISAAKGLFPGCKTPVKNLFTCGASTFPGIGI
PAVSASGAYAAEKIIGKKEFKTLIKKINL

Sequences:

>Translated_509_residues
MEMYDVVIVGSGIGGLCCGSILALSGKKVLICEAHTRPGGVAHSFQRKGYTFESGPSLWSGIGKWPTTNPLGQILKLLDE
EVELFQYKGWRVIVPEGNFNLNVGEEPFKQTIKTLRGEKSVKEWESFISGIKPLSQIINEIPLLSFCPESINFLDLINLT
SKFLPNIKQIPKINKGFGKLVNNHLEDPFLRNWVDLLSFLISGMSMHDTNTAAMATLFNEWFEPNSYLEYPKGGSESIVK
ALINGFKKNGGELILSSKVKTINFNKNFATGIALDNGSSYSCNSVVTNTDVWNLKKLIPNEISKKWNTKVLNPNKCDSFL
HIHLGFDADGLEDLPIHAIHVDKWEKGITAERNIAVFSIPSVLDKNMAPKGKHVLHGYTPANEPWEIWENLNPKELEYRN
LKEERCSIFLNAVRKFIPDIDERIDLKMLGTPITHKKFTNTHCGSYGPAISAAKGLFPGCKTPVKNLFTCGASTFPGIGI
PAVSASGAYAAEKIIGKKEFKTLIKKINL
>Mature_509_residues
MEMYDVVIVGSGIGGLCCGSILALSGKKVLICEAHTRPGGVAHSFQRKGYTFESGPSLWSGIGKWPTTNPLGQILKLLDE
EVELFQYKGWRVIVPEGNFNLNVGEEPFKQTIKTLRGEKSVKEWESFISGIKPLSQIINEIPLLSFCPESINFLDLINLT
SKFLPNIKQIPKINKGFGKLVNNHLEDPFLRNWVDLLSFLISGMSMHDTNTAAMATLFNEWFEPNSYLEYPKGGSESIVK
ALINGFKKNGGELILSSKVKTINFNKNFATGIALDNGSSYSCNSVVTNTDVWNLKKLIPNEISKKWNTKVLNPNKCDSFL
HIHLGFDADGLEDLPIHAIHVDKWEKGITAERNIAVFSIPSVLDKNMAPKGKHVLHGYTPANEPWEIWENLNPKELEYRN
LKEERCSIFLNAVRKFIPDIDERIDLKMLGTPITHKKFTNTHCGSYGPAISAAKGLFPGCKTPVKNLFTCGASTFPGIGI
PAVSASGAYAAEKIIGKKEFKTLIKKINL

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI203098013, Length=526, Percent_Identity=22.8136882129278, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 56499; Mature: 56499

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMYDVVIVGSGIGGLCCGSILALSGKKVLICEAHTRPGGVAHSFQRKGYTFESGPSLWS
CCEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHH
GIGKWPTTNPLGQILKLLDEEVELFQYKGWRVIVPEGNFNLNVGEEPFKQTIKTLRGEKS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHCCCCH
VKEWESFISGIKPLSQIINEIPLLSFCPESINFLDLINLTSKFLPNIKQIPKINKGFGKL
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHH
VNNHLEDPFLRNWVDLLSFLISGMSMHDTNTAAMATLFNEWFEPNSYLEYPKGGSESIVK
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ALINGFKKNGGELILSSKVKTINFNKNFATGIALDNGSSYSCNSVVTNTDVWNLKKLIPN
HHHHHHHCCCCEEEEECCEEEEECCCCCEEEEEEECCCCCCCCCEEECCCHHHHHHHHHH
EISKKWNTKVLNPNKCDSFLHIHLGFDADGLEDLPIHAIHVDKWEKGITAERNIAVFSIP
HHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHCCCCCCCCEEEEECH
SVLDKNMAPKGKHVLHGYTPANEPWEIWENLNPKELEYRNLKEERCSIFLNAVRKFIPDI
HHHCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
DERIDLKMLGTPITHKKFTNTHCGSYGPAISAAKGLFPGCKTPVKNLFTCGASTFPGIGI
HHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC
PAVSASGAYAAEKIIGKKEFKTLIKKINL
CCCCCCCHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MEMYDVVIVGSGIGGLCCGSILALSGKKVLICEAHTRPGGVAHSFQRKGYTFESGPSLWS
CCEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHH
GIGKWPTTNPLGQILKLLDEEVELFQYKGWRVIVPEGNFNLNVGEEPFKQTIKTLRGEKS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHCCCCH
VKEWESFISGIKPLSQIINEIPLLSFCPESINFLDLINLTSKFLPNIKQIPKINKGFGKL
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHH
VNNHLEDPFLRNWVDLLSFLISGMSMHDTNTAAMATLFNEWFEPNSYLEYPKGGSESIVK
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ALINGFKKNGGELILSSKVKTINFNKNFATGIALDNGSSYSCNSVVTNTDVWNLKKLIPN
HHHHHHHCCCCEEEEECCEEEEECCCCCEEEEEEECCCCCCCCCEEECCCHHHHHHHHHH
EISKKWNTKVLNPNKCDSFLHIHLGFDADGLEDLPIHAIHVDKWEKGITAERNIAVFSIP
HHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHCCCCCCCCEEEEECH
SVLDKNMAPKGKHVLHGYTPANEPWEIWENLNPKELEYRNLKEERCSIFLNAVRKFIPDI
HHHCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
DERIDLKMLGTPITHKKFTNTHCGSYGPAISAAKGLFPGCKTPVKNLFTCGASTFPGIGI
HHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC
PAVSASGAYAAEKIIGKKEFKTLIKKINL
CCCCCCCHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2254247 [H]