| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695571
Identifier: 126695571
GI number: 126695571
Start: 217014
End: 218012
Strand: Reverse
Name: 126695571
Synonym: P9301_02331
Alternate gene names: NA
Gene position: 218012-217014 (Counterclockwise)
Preceding gene: 126695573
Following gene: 126695570
Centisome position: 13.28
GC content: 35.54
Gene sequence:
>999_bases ATGGAAATAAATCCAATTCTGCAAAATGTATTAGCCCCGCCAGTTCTTTTCTTTTTAATTGGAGCAATATCAGTACTATT TAAATCTGATTTAGAAATACCAGCTCCATTGCCTAAACTCTTCTCCTTATATTTGCTCTTAGCCATTGGGTTTAAAGGAG GTATAGAGATACAGAGAAGTGGGTTTACAGATCAAGTATTGCCGACTTTAAGCGCTGCAATACTAATGTCACTATTAATA CCTCTGATTGGATTTTTAATTTTAAGATTTAAGTTTGATGTCTTTAATTCCGCTGCAATAGCTGCAGCATACGGTTCAAT TAGTGCTGTTACATTTATTTCCGCAGAAAGTTTTTTGGAAAGTCAAAAAATAGCTTTTGATGGTTTTATGGTTGGAGCCT TAGCTTTAATGGAATCTCCTGCAATAATTGTTGGATTATTACTTGTGAAATTTGCAGCTCCTAAAAATAGGCCAAAATCA AGAAAAATGCATCTAAGCGCAATATTACACGAATCACTTTTGAATGGATCAGTTTATTTATTGCTCTCAAGTTTAATTGT AGGATTTCTTACTGCTTCCAGTAATCCCTCAGGGATTGCAAAAATGGAGCCTTTTACTGGACAATTATTTTATGGAGCAG AATGCTTCTTCTTGTTAGATATGGGAATAGTCGCTGCTCAAAGATTGCCTAGACTGAAGAATGCAGGTTCCTTCTTGATT GGCTTTGCTATTTTTATGCCGTTATTTAATGCATTTATTGGTGTTTTTGTTGCAAGATTTTTATCTTTAGGACCTGGCAA CGCACTTTTATTTGTGGTTTTATGTGCGAGCGCATCTTATTTAGCAGTTCCTGCAGCGATGAGGATGACGGTACCAGAAG CCAAATCTAGTTATTATATTTCAACTACACTAGGTCTAACTTTCCCATTCAATATAGTTCTCGGCATTCCCATATATATG AGTTTAGTAAATACCATTATCCCACTTTCCCCTCTATGA
Upstream 100 bases:
>100_bases AAAAGTAAAAGATAGATTAGCTAAGTTTGGAGTTGAAGGAATCATTGAGACAAGAAAAGAAGCTTTAGAAACCGCTCTAA ATGAAATAGCCTAATAATTT
Downstream 100 bases:
>100_bases AAATGAAAAGATTAGACTTGATATTTAGTGAAAGAGAACTAGATGCAATCATTAAAACATTAGAAAAAGCTAATGTTCCT GGATACACTGTTATGAAGCA
Product: putative sodium-dependent bicarbonate transporter
Products: NA
Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; SBT Type Permease Sodium-Bicarbonate; Membrane Permease; Conserved Domain Protein; Permease-Like Protein; Domain Transmembrane Protein
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MEINPILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQRSGFTDQVLPTLSAAILMSLLI PLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLESQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKS RKMHLSAILHESLLNGSVYLLLSSLIVGFLTASSNPSGIAKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI GFAIFMPLFNAFIGVFVARFLSLGPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYISTTLGLTFPFNIVLGIPIYM SLVNTIIPLSPL
Sequences:
>Translated_332_residues MEINPILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQRSGFTDQVLPTLSAAILMSLLI PLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLESQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKS RKMHLSAILHESLLNGSVYLLLSSLIVGFLTASSNPSGIAKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI GFAIFMPLFNAFIGVFVARFLSLGPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYISTTLGLTFPFNIVLGIPIYM SLVNTIIPLSPL >Mature_332_residues MEINPILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQRSGFTDQVLPTLSAAILMSLLI PLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLESQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKS RKMHLSAILHESLLNGSVYLLLSSLIVGFLTASSNPSGIAKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI GFAIFMPLFNAFIGVFVARFLSLGPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYISTTLGLTFPFNIVLGIPIYM SLVNTIIPLSPL
Specific function: Unknown
COG id: COG3329
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35660; Mature: 35660
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINPILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEC GFTDQVLPTLSAAILMSLLIPLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH SQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKSRKMHLSAILHESLLNGSVYL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHH LLSSLIVGFLTASSNPSGIAKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI HHHHHHHHHHHCCCCCCCCEECCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHCCCHHHH GFAIFMPLFNAFIGVFVARFLSLGPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEE STTLGLTFPFNIVLGIPIYMSLVNTIIPLSPL EEEECCEEHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEINPILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEC GFTDQVLPTLSAAILMSLLIPLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH SQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKSRKMHLSAILHESLLNGSVYL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHH LLSSLIVGFLTASSNPSGIAKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI HHHHHHHHHHHCCCCCCCCEECCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHCCCHHHH GFAIFMPLFNAFIGVFVARFLSLGPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEE STTLGLTFPFNIVLGIPIYMSLVNTIIPLSPL EEEECCEEHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA