Click here to switch to the map view.

The map label for this gene is degQ [C]

Identifier: 126695442

GI number: 126695442

Start: 105099

End: 106220

Strand: Reverse

Name: degQ [C]

Synonym: P9301_01041

Alternate gene names: 126695442

Gene position: 106220-105099 (Counterclockwise)

Preceding gene: 126695447

Following gene: 126695439

Centisome position: 6.47

GC content: 32.17

Gene sequence:

>1122_bases
TTGAAAAGATACATCCATAAGCTATTAGTAATCGTCTCATTAATTCCAATAGGCATTACATATCCTGCAAAAGTAATATC
CCAACCATTAAGCAAATCAAACATTAATGAAGTTAGTTTATTTTCAAACAAATCTTTCATAACAAAAGCTGTAGAGAGAA
CCGGTGCAGCTGTGGTGACAATTGATACTCAAAGATATGTTAAAAAAAGAAAATTTCCAAGAAATTCTCAACTATTTATA
GACCCATATTTTGAAAGATTTTTTGGATTAGATTTGCCTAACGAAAACCGACCAAGGATAGAGCAAAACCAAGGCAGTGG
ATTTATATTTGCAGATGGACTTGTCATGACCAATGCTCATGTAGTGAATGGATCAGATAAGGTAATTGTTGGTTTAACCA
ACGGCAAAAAATTAAACGCCCAACTGATAGGTCAAGACTCTTTTACTGATTTAGCTGTGTTAAAGATTGAAGGGAAAGGG
CCTTGGCCAAAAGCAAAATTGGGCGATTCTGCAAAGATTAAAGTTGGTGATTGGGCTATAGCAGTTGGAAATCCATTCGG
ACTGGAAAACACAGTTACTCTTGGTATTATTAGTAATCTAAATAGAAACGTAAATCAATTAGGAATATATGATAAAAAAC
TTGAACTGATACAAACAGACGCTGCTATTAATCCTGGCAATTCTGGAGGTCCACTGTTGAATAGCGATGGTGAAGTAATT
GGTATTAATACGTTGATAAGATCAGGTCCAGGAGCGGGTTTGAGTTTTGCAATCCCAATTAATAAAGCTAAGGAAATTGC
CTATCAACTTTTACAAAATGGGAAAGTAATACATCCTATGATTGGAATTAGCCTAATAGAAGAAAGTATTTCTGAGAGAA
AAAATAAGGTTGTAAAAGTTGGATATGTAGTACCAAACAGTCCAGCTGAAAAAAGTGGAATCAAGATAGATGATATTTTA
ATTAAAATAGGAAATAAAGATATTGAAACAGCATCAGACGTAATAGAACAAATTAGTAAAAATGGTATCAAAAAACAAGT
AAATATATTATTGAAGCGTAAAAATAAATTTATTAAATTAAAAGTAATACCAACTGATATTACTAATCTACAAAATAACT
AA

Upstream 100 bases:

>100_bases
CTAAATTATTCTCTAGATTCAATTAATTAAATTACTAGTTATATTTAAATTACACTAGTATGGTGGATTTAATCTCTGAA
AAAACACAAGAAAATCAAAA

Downstream 100 bases:

>100_bases
AAAATTTAATTGTCATTCCGTTTGAGTATTTCCACACATCTAGAAATACATCTACCATCCCTCATATCGCAGGAAGTTAT
GCATTCAAAATAACTTTCAA

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKRYIHKLLVIVSLIPIGITYPAKVISQPLSKSNINEVSLFSNKSFITKAVERTGAAVVTIDTQRYVKKRKFPRNSQLFI
DPYFERFFGLDLPNENRPRIEQNQGSGFIFADGLVMTNAHVVNGSDKVIVGLTNGKKLNAQLIGQDSFTDLAVLKIEGKG
PWPKAKLGDSAKIKVGDWAIAVGNPFGLENTVTLGIISNLNRNVNQLGIYDKKLELIQTDAAINPGNSGGPLLNSDGEVI
GINTLIRSGPGAGLSFAIPINKAKEIAYQLLQNGKVIHPMIGISLIEESISERKNKVVKVGYVVPNSPAEKSGIKIDDIL
IKIGNKDIETASDVIEQISKNGIKKQVNILLKRKNKFIKLKVIPTDITNLQNN

Sequences:

>Translated_373_residues
MKRYIHKLLVIVSLIPIGITYPAKVISQPLSKSNINEVSLFSNKSFITKAVERTGAAVVTIDTQRYVKKRKFPRNSQLFI
DPYFERFFGLDLPNENRPRIEQNQGSGFIFADGLVMTNAHVVNGSDKVIVGLTNGKKLNAQLIGQDSFTDLAVLKIEGKG
PWPKAKLGDSAKIKVGDWAIAVGNPFGLENTVTLGIISNLNRNVNQLGIYDKKLELIQTDAAINPGNSGGPLLNSDGEVI
GINTLIRSGPGAGLSFAIPINKAKEIAYQLLQNGKVIHPMIGISLIEESISERKNKVVKVGYVVPNSPAEKSGIKIDDIL
IKIGNKDIETASDVIEQISKNGIKKQVNILLKRKNKFIKLKVIPTDITNLQNN
>Mature_373_residues
MKRYIHKLLVIVSLIPIGITYPAKVISQPLSKSNINEVSLFSNKSFITKAVERTGAAVVTIDTQRYVKKRKFPRNSQLFI
DPYFERFFGLDLPNENRPRIEQNQGSGFIFADGLVMTNAHVVNGSDKVIVGLTNGKKLNAQLIGQDSFTDLAVLKIEGKG
PWPKAKLGDSAKIKVGDWAIAVGNPFGLENTVTLGIISNLNRNVNQLGIYDKKLELIQTDAAINPGNSGGPLLNSDGEVI
GINTLIRSGPGAGLSFAIPINKAKEIAYQLLQNGKVIHPMIGISLIEESISERKNKVVKVGYVVPNSPAEKSGIKIDDIL
IKIGNKDIETASDVIEQISKNGIKKQVNILLKRKNKFIKLKVIPTDITNLQNN

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=349, Percent_Identity=36.3896848137536, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI7019477, Length=343, Percent_Identity=34.402332361516, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI22129776, Length=314, Percent_Identity=35.6687898089172, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI24308541, Length=281, Percent_Identity=35.5871886120996, Blast_Score=151, Evalue=1e-36,
Organism=Escherichia coli, GI1789629, Length=290, Percent_Identity=39.3103448275862, Blast_Score=174, Evalue=8e-45,
Organism=Escherichia coli, GI1786356, Length=370, Percent_Identity=32.4324324324324, Blast_Score=158, Evalue=6e-40,
Organism=Escherichia coli, GI1789630, Length=287, Percent_Identity=36.5853658536585, Blast_Score=154, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24646839, Length=309, Percent_Identity=34.6278317152104, Blast_Score=147, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 40781; Mature: 40781

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYIHKLLVIVSLIPIGITYPAKVISQPLSKSNINEVSLFSNKSFITKAVERTGAAVVT
CHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCEEEE
IDTQRYVKKRKFPRNSQLFIDPYFERFFGLDLPNENRPRIEQNQGSGFIFADGLVMTNAH
ECHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCEEEECEE
VVNGSDKVIVGLTNGKKLNAQLIGQDSFTDLAVLKIEGKGPWPKAKLGDSAKIKVGDWAI
EECCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCEEE
AVGNPFGLENTVTLGIISNLNRNVNQLGIYDKKLELIQTDAAINPGNSGGPLLNSDGEVI
EECCCCCCCCEEEEEEECCCCCCHHHCCCCHHHHHEEEECCCCCCCCCCCCEECCCCCEE
GINTLIRSGPGAGLSFAIPINKAKEIAYQLLQNGKVIHPMIGISLIEESISERKNKVVKV
EEEHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCEEEE
GYVVPNSPAEKSGIKIDDILIKIGNKDIETASDVIEQISKNGIKKQVNILLKRKNKFIKL
EEEECCCCCHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHEECCCCEEEE
KVIPTDITNLQNN
EEECCCCCCCCCC
>Mature Secondary Structure
MKRYIHKLLVIVSLIPIGITYPAKVISQPLSKSNINEVSLFSNKSFITKAVERTGAAVVT
CHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCEEEE
IDTQRYVKKRKFPRNSQLFIDPYFERFFGLDLPNENRPRIEQNQGSGFIFADGLVMTNAH
ECHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCEEEECEE
VVNGSDKVIVGLTNGKKLNAQLIGQDSFTDLAVLKIEGKGPWPKAKLGDSAKIKVGDWAI
EECCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCEEE
AVGNPFGLENTVTLGIISNLNRNVNQLGIYDKKLELIQTDAAINPGNSGGPLLNSDGEVI
EECCCCCCCCEEEEEEECCCCCCHHHCCCCHHHHHEEEECCCCCCCCCCCCEECCCCCEE
GINTLIRSGPGAGLSFAIPINKAKEIAYQLLQNGKVIHPMIGISLIEESISERKNKVVKV
EEEHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCEEEE
GYVVPNSPAEKSGIKIDDILIKIGNKDIETASDVIEQISKNGIKKQVNILLKRKNKFIKL
EEEECCCCCHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHEECCCCEEEE
KVIPTDITNLQNN
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA