| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is 126695408
Identifier: 126695408
GI number: 126695408
Start: 74235
End: 75521
Strand: Reverse
Name: 126695408
Synonym: P9301_00701
Alternate gene names: NA
Gene position: 75521-74235 (Counterclockwise)
Preceding gene: 126695410
Following gene: 126695403
Centisome position: 4.6
GC content: 28.52
Gene sequence:
>1287_bases ATGTATTCTGGCTTAACTGCAATGAAAAAAGAATCAGTTGCAGTAGTTATAATTTCCAATGGTCCTGGTGAATTAACTAC ATGGGTAAATCCTGTAGTGGATGAGCTAAACAAAATAAATAAATCACTAAGTGATGAAGATAAACAAGATTTCACTCTTA GGTTAGTCCTTGTTCCTTGCCCAAATGCCACTGGTAAAGAATTTTTAGTTGCAAATTCATGGAATAAATTCGAATTAATT ACAAAATCCAAAAGTTTTTGGAAATTATTAATAAAGCCAAATTCTTTTGCTGATTGGCCAAAAAAAGGGATAGTTATTTT CCTTGGTGGGGATCAATTTTGGAGCATTTTATTAGCTAAAAGATTAGGTTATTTAAATATCACATATGCTGAATGGGTTT CTAGATGGCCTAATTGGACCAATGAAATTGCTGCTATGAATGAAAAAGTAAAAGAGTTAATACCTAAAAGATATAAATAT AAATGCAAAGTAATTGGCGATTTGATGGCAGATATCAAACTTAATAGCAAAATATCACTAAGAAATAAAGAAAAACACTA CATTGCATTATTGCCTGGTTCTAAGAAAGCAAAGCTTTCTATTGGAATTCCTTTCTTCTTAGAAGTTGCAGATCATATCG CTAAAGAAAATCAAAATATAAATTTTATAATCCCCATTGCACCAACCACTGATAAAAGTGAATATTTATTTTTTCAAAGC AACAAAAATCCAATTGCTAAATATTACTCATCAAAAATCAAAACAATTAAAAACTTCAAAGACTCTAGTTTTGATTATGT AATTGAAACATCAAAAAAAACAAAGATTTATCTAATCAAAAAACATCCTTGCTATGAAATATTAAAAGAATGTGATCTTG CAATTACAACTGTAGGAGCAAATACTGCAGAATTAGCAGCAATTAGTCTTCCAATGTTAGTTGTTCTGCCAACTCAACAT TTAAATATGATGAACGCTTGGGATGGTATTTTTGGAGTAGTTGGAAAAATTTCATTCATAAATAGATTCCTAACTTTTAT AATTAAAAATTTCTATTTTAAAAAAAAGAAGTTTTTTGCTTGGCCAAATATTAAAGCTAAGAAAATGATTGTCCCTGAAA GGATAGGTAATATTTCGACAATAAAAATTGCAAGAGAAGTATTATTTCTTATTAAAAACAGAGATCAATTAAAAAGTATT AGGGATAATCTAAATAAAGAAAGAGGCAATAAAGGTGCTGCAAAAAAGCTTGCTTCTATAATTGTTGATTCAATAAAAAA ACTTTAA
Upstream 100 bases:
>100_bases GCTAAAAACCCTTTGCGGACGTGGCGGAATTGGTAGACGCGCACGTCTAAGGAGCGTGTGGCTTCGGCCTTGCGAGTTCA AGTCTCGCCGTCCGCATTTA
Downstream 100 bases:
>100_bases CAATTACCAGGGATCATCAATTTCAAACTTTTCTGATTTTTTATTATCTTGAACTAAATTTTGTTCGTTCATTGGTTCAA TATCTAAAGTTTCAGTTGCA
Product: lipid A disaccharide synthetase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MYSGLTAMKKESVAVVIISNGPGELTTWVNPVVDELNKINKSLSDEDKQDFTLRLVLVPCPNATGKEFLVANSWNKFELI TKSKSFWKLLIKPNSFADWPKKGIVIFLGGDQFWSILLAKRLGYLNITYAEWVSRWPNWTNEIAAMNEKVKELIPKRYKY KCKVIGDLMADIKLNSKISLRNKEKHYIALLPGSKKAKLSIGIPFFLEVADHIAKENQNINFIIPIAPTTDKSEYLFFQS NKNPIAKYYSSKIKTIKNFKDSSFDYVIETSKKTKIYLIKKHPCYEILKECDLAITTVGANTAELAAISLPMLVVLPTQH LNMMNAWDGIFGVVGKISFINRFLTFIIKNFYFKKKKFFAWPNIKAKKMIVPERIGNISTIKIAREVLFLIKNRDQLKSI RDNLNKERGNKGAAKKLASIIVDSIKKL
Sequences:
>Translated_428_residues MYSGLTAMKKESVAVVIISNGPGELTTWVNPVVDELNKINKSLSDEDKQDFTLRLVLVPCPNATGKEFLVANSWNKFELI TKSKSFWKLLIKPNSFADWPKKGIVIFLGGDQFWSILLAKRLGYLNITYAEWVSRWPNWTNEIAAMNEKVKELIPKRYKY KCKVIGDLMADIKLNSKISLRNKEKHYIALLPGSKKAKLSIGIPFFLEVADHIAKENQNINFIIPIAPTTDKSEYLFFQS NKNPIAKYYSSKIKTIKNFKDSSFDYVIETSKKTKIYLIKKHPCYEILKECDLAITTVGANTAELAAISLPMLVVLPTQH LNMMNAWDGIFGVVGKISFINRFLTFIIKNFYFKKKKFFAWPNIKAKKMIVPERIGNISTIKIAREVLFLIKNRDQLKSI RDNLNKERGNKGAAKKLASIIVDSIKKL >Mature_428_residues MYSGLTAMKKESVAVVIISNGPGELTTWVNPVVDELNKINKSLSDEDKQDFTLRLVLVPCPNATGKEFLVANSWNKFELI TKSKSFWKLLIKPNSFADWPKKGIVIFLGGDQFWSILLAKRLGYLNITYAEWVSRWPNWTNEIAAMNEKVKELIPKRYKY KCKVIGDLMADIKLNSKISLRNKEKHYIALLPGSKKAKLSIGIPFFLEVADHIAKENQNINFIIPIAPTTDKSEYLFFQS NKNPIAKYYSSKIKTIKNFKDSSFDYVIETSKKTKIYLIKKHPCYEILKECDLAITTVGANTAELAAISLPMLVVLPTQH LNMMNAWDGIFGVVGKISFINRFLTFIIKNFYFKKKKFFAWPNIKAKKMIVPERIGNISTIKIAREVLFLIKNRDQLKSI RDNLNKERGNKGAAKKLASIIVDSIKKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48901; Mature: 48901
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSGLTAMKKESVAVVIISNGPGELTTWVNPVVDELNKINKSLSDEDKQDFTLRLVLVPC CCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC PNATGKEFLVANSWNKFELITKSKSFWKLLIKPNSFADWPKKGIVIFLGGDQFWSILLAK CCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHH RLGYLNITYAEWVSRWPNWTNEIAAMNEKVKELIPKRYKYKCKVIGDLMADIKLNSKISL HCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHEEECCEEEE RNKEKHYIALLPGSKKAKLSIGIPFFLEVADHIAKENQNINFIIPIAPTTDKSEYLFFQS CCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEC NKNPIAKYYSSKIKTIKNFKDSSFDYVIETSKKTKIYLIKKHPCYEILKECDLAITTVGA CCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHCCEEEEEECC NTAELAAISLPMLVVLPTQHLNMMNAWDGIFGVVGKISFINRFLTFIIKNFYFKKKKFFA CHHHHHHHHCCEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE WPNIKAKKMIVPERIGNISTIKIAREVLFLIKNRDQLKSIRDNLNKERGNKGAAKKLASI CCCCCEEEEECHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH IVDSIKKL HHHHHHCC >Mature Secondary Structure MYSGLTAMKKESVAVVIISNGPGELTTWVNPVVDELNKINKSLSDEDKQDFTLRLVLVPC CCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC PNATGKEFLVANSWNKFELITKSKSFWKLLIKPNSFADWPKKGIVIFLGGDQFWSILLAK CCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHH RLGYLNITYAEWVSRWPNWTNEIAAMNEKVKELIPKRYKYKCKVIGDLMADIKLNSKISL HCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHEEECCEEEE RNKEKHYIALLPGSKKAKLSIGIPFFLEVADHIAKENQNINFIIPIAPTTDKSEYLFFQS CCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEC NKNPIAKYYSSKIKTIKNFKDSSFDYVIETSKKTKIYLIKKHPCYEILKECDLAITTVGA CCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHCCEEEEEECC NTAELAAISLPMLVVLPTQHLNMMNAWDGIFGVVGKISFINRFLTFIIKNFYFKKKKFFA CHHHHHHHHCCEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE WPNIKAKKMIVPERIGNISTIKIAREVLFLIKNRDQLKSIRDNLNKERGNKGAAKKLASI CCCCCEEEEECHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH IVDSIKKL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA