Definition Staphylothermus marinus F1 chromosome, complete genome.
Accession NC_009033
Length 1,570,485

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Identifier: 126465958

GI number:

Start: 1028256

End: 1029902

Strand: Direct

Name: Not Available

Synonym: Smar_1061

Alternate gene names: NA

Gene position: NA

Preceding gene: 126465957

Following gene: 126465959

Centisome position: NA

GC content: NA

Gene sequence:

>1647_bases
ATGATAAATAGAATTGATAGTGTCAGGCAGCATATCATAGAGAAACTAGGAGATATTGTAAAGGAAACTAAGTATATCGG
TGACCAAGCTTTAATGTTGCGTATAGATAGAAATTATTTAAGAAAAGCTGTAGACATAATTCATAATGATCTGAATGCGT
ATTTTAGAACTATGGTAGCGGTTGATGAAAGATCGTTGAATGGCACTTTTGCGTCTTATTATATTTTTGGACTTGACGCA
GCTCATTTAAATATAATTGTTAAGACACATACTAGCGCTGATGAACCTGTTTTACCGTCAATAATTGATATTGTCCCGGC
TGCTGATTGGTATGAGTTGGAAGCTTGGGATCTATTAGGGATCAAGTTTGAAAATAGAAAGGTTCACAGGTTTGTTCTAC
CTGATGAGTGGCCTGAAGGAATATATCCTCTGAGAAAAGATGTTGAATATACCTATAGGCCTAAACCTAGGAAAGTTCCC
AGACAACCACCCACGGGTCAACGAATACCTATCGGACCATATCATCCCGCACTACACGAGCCTGAATATTTTGAACTATA
CGTAGAAGGAGAGAAAGTAGTTGATGTAGAATATAATGGCTTTCATGTTCATAGAGGTATAGAAAAACTCGCTGAGGCAC
CTCGATTTAATTATCAAAAAATACCTTTCTTAGCTGAGAGAATATGTGGCATATGTGGATTCGTTCATAGCGTATCATAC
ACTATGAGCGTTGAAAGAGCAGCAAAAATAGATGTTCCGGAGAGAGCAGAGTATATTCGAAGCATTATTTTAGAGATTGA
ACGCTTACATAGCCACTTATTATGGATAGGGGTAGTATGTCATCTTCTCGGCTATGATGCAGGGTTTATGCATACTTGGA
GGATTAGAGAAAAAGTGATGGTACTTGCAGAGCTCTTAACGGGAAGTCGTAAAACATATGGTATAAATCTCGTTGGAGGA
GTGAGAAAAGATATAAACATGGACAAAATTGAGGCTGTAAAGAACACTATAGAATATATTCGATCAGAGTTTAAACATCT
TTCAGATCTAATTACAAGTATTTCGCAAATAGTTAAAAGAGCTAGTGGCACAGGCATTTTGTCAAGAGATGATGCAAGAA
AGCTCTCGGTAGTAGGACCTGTTGCTAGGGGTTCGGGTCTCGACAGGGATGTTCGTAGGGATTATCCATATGCTGCATAT
AGAGATGTTTATTTTAAAGTACCAGTCTATAATGAGGGAGATAATCTAGCCAGGCTTCTCGTTAGAATAGATGAAGTATT
TGAATCTATATATATTCTAGAACAACTAATTGATAAATTGCCCGGAGGACCCATAATGGCTGAAAAGCTAGAAGTTCCTG
AGGGAGTAATAGGTATAGGAAACGTTGAGGCACCACGAGGCGAGGTAATACATGTAACTATAACGGGTCATGGAAGACCT
TATCGTTGGAGAGTTCGTGCGCCTACTTATCAGAATATTCCAGCATTGAAAATTATGCTTCGCGATGCACCATTAGCTGA
TGCACCATTAACTATAGCTAGCATTGATCCGTGTTTCTCATGTACGGATCGAATAGTAATAGTGGATCTAAGATCAAATA
GGAGATTTAAAGCTTCTATGGAGCAAATAATTAAGGCGGGAAGGTGA

Upstream 100 bases:

>100_bases
CTAGAACGATGTTTGTTGTTTATTTACTCTTTTATTCAATAATTGTTGTTTTATGGTTAATAGGGATATAAAATATATAA
TAAAAATGAGGGTATGAAAC

Downstream 100 bases:

>100_bases
TCATGTTATGTTAGTTAGAAAACTCCTAAAACCATTAAAACTGATCTCTGTCGCAAAGAAGGCAGGAGTAGTAACTGTAT
TATATCCGTATCAAAAACCA

Product: NADH dehydrogenase (ubiquinone), 30 kDa subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>548_residues
MINRIDSVRQHIIEKLGDIVKETKYIGDQALMLRIDRNYLRKAVDIIHNDLNAYFRTMVAVDERSLNGTFASYYIFGLDA
AHLNIIVKTHTSADEPVLPSIIDIVPAADWYELEAWDLLGIKFENRKVHRFVLPDEWPEGIYPLRKDVEYTYRPKPRKVP
RQPPTGQRIPIGPYHPALHEPEYFELYVEGEKVVDVEYNGFHVHRGIEKLAEAPRFNYQKIPFLAERICGICGFVHSVSY
TMSVERAAKIDVPERAEYIRSIILEIERLHSHLLWIGVVCHLLGYDAGFMHTWRIREKVMVLAELLTGSRKTYGINLVGG
VRKDINMDKIEAVKNTIEYIRSEFKHLSDLITSISQIVKRASGTGILSRDDARKLSVVGPVARGSGLDRDVRRDYPYAAY
RDVYFKVPVYNEGDNLARLLVRIDEVFESIYILEQLIDKLPGGPIMAEKLEVPEGVIGIGNVEAPRGEVIHVTITGHGRP
YRWRVRAPTYQNIPALKIMLRDAPLADAPLTIASIDPCFSCTDRIVIVDLRSNRRFKASMEQIIKAGR

Sequences:
NA

Specific function: NA

COG id: COG3261

COG function: function code C; Ni,Fe-hydrogenase III large subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA