| Definition | Staphylothermus marinus F1 chromosome, complete genome. |
|---|---|
| Accession | NC_009033 |
| Length | 1,570,485 |
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Identifier: 126465903
GI number:
Start: 979739
End: 982543
Strand: Direct
Name: Not Available
Synonym: Smar_1006
Alternate gene names: NA
Gene position: NA
Preceding gene: 126465900
Following gene: 126465905
Centisome position: NA
GC content: NA
Gene sequence:
>2805_bases ATGACTAACCTTGTCAAATGCCTGCAAGAAATAGGATACAAGAAACTTACATCTCTCCAAATAAAAGCATTCAAAGCCAT ATATAAAGAAAAAAACTCAGTAATAATTGTCGCACCAACAGGTTCCGGTAAAACAGAAGCTGCTCTATTACCTATAATGT ATAAAATAAATAAGCACGGATATAAGCCAATATCAGCTATTTATATAACACCATTAAGAGCGCTCAATAGAGATATTAAG AGAAGAATGGAAAAGCTAGCTAAATGCTTCGGGGTTTCAATAAATTTAAGACACGGTGACACACCTTACAAGCTTCGCAA ATATATAGAGACAAATCCGCCCCACATTCTTGTTACAACTCCTGAAACATTCAATTATATATTGATAAACGATAAGATGA GAAAATATATTGCTAATCTAAAGTACATCGTTATCGACGAATTCAGAGATTTAATAGAAAGTAAACGTGGTATTTTATTA TTAACTAGTATTTATTTATTAGAGCATTATCTTAAACATAAATTTATAAAGATCGCTTTAACGGCGACTTTGAAGAATAT TAGGTTAGCAATGGAGATACTGAGTAGCTCTGCTTTGCCCAGTAATATTGATGTATTGATCGATAATACTTTGAAGCCTA TTGATGTTAAAGTAGTGGTTCCCGAATGCAAAGATAATGATAATAAATGTAAATTTCTGAGCTCGATTCTAGAAGATAAA GATTTAATTGCTAGAATTCTCAGGATATATGATTTATTTAGGTCTAAGAGGAGCATTCTCGTATTTGTTAATACTAGATC GATAGCTGAAAAGCTTGGTTATTTATTAAAAGTCGTTAATGAAAAATTGGGGGCTAATAATATTCATGTAGAAGTCCATC ATGGAAGCTTATCGAGGAATCATAGATTAAAGGTTGAAGAAGACTTTAGAAATGGGCGCTTAAAGGGATTAATTGCGACT TCAAGTATGGAACTAGGTATTGATGTTGGATTTATTGATTATGTTATTCAATATATGTCTCCAAGACAAGTTGTCAGGCT CGTTCAGAGAATTGGTAGAAGTGGTCATAAATTATCTGGGATTTCTCGTGGAGAAATAATTGTTCAAAACAATACTTTAC AGATACTAGAATCCCTCGTAATAGCTAGAAGAGCAATTAATGGTGATATAGAAGAGGAGAGAATACCTGTTAAGCCATTA GATGTTCTTGCTTATTCCATCGTATTGTATAGTTTGATAACAGAGGGTATCAACATATATGATCTTTATTCATTGTTAAT TATGAATCCCATATATAGAGATCTTGATGTAAAAGAGTTCAATGACTTAATCGAGTATTTGAAATATGCCAGGCTTATCA AGGTAAAAGAAAATATTATCAAGCCAACTTCTAGGTCCAGATTATTCATATATAAAACAACAATGATTCCTTCAACCAAA GACGTTATAATAATAAACGTTGTAGATGATCGTAGAATAGGTGTATTGAACGAGGAATACGTTGTTCTAAATATCTCTGA AGGAGACGTAGTGGTTGTTGGGGGAAAGCCGTGGAAAGTCATAGGATATGATCAACAGAATGCCAAGCTATATGTTGAAC CATATAATGTATCAGAGAATATAATAATACCTCACTGGGAGGGCGAAAATATACCGGTTGAATACAAGTTGGCTAGAGAA GTTGGATCACTTATAAGAAGAATTTCCTTAAACATGAAGATCGACGATTATAAAACGCTCTTATTAAACGATAATATAAA GCTTGAAGGCATTAATGATCTTGCTGATGATAAAACTATTATAATTGAGGGAAATATTGAGCTTGGTCTTGTAATAGTTA ATATCAATGGGGGTTCAAGGGTTAATAGGTTCATGAGAGATCTATTGAAATCAGTGATTCAATGGAGATATCCGTTTCTA AAAATTAATGCGTACTCTACACCATACGCGGTATTTATTACATTAAATAATAAACAATATGTTAGAGAAGTAGTTAATAC GATCGAGCAAGTAATGCATAATATTAATCGGTATCTGACCCGTAAAAGTTTGAAAAGAATAGCGGTTGAACAAGGTACTA TGCACTGGAGAATATTTCAGGTAGCACAACGATTTGGAGCATTGGATCCTGAGAAAAATAAAATCACTAAAGCTATGCTC GAGGCCTTTGTAGACACGGTTATAGGATATGAAGCATTAAACGAAGTTTTATGGAAAGATTATGATATTGAATCGATCAA ACAGCTAGCCGACTTAGTCATGAATGGTAATGTAAAAATTATCTCTAAAATTACAAGTAAACTAACTAATGGCGGGAGAC AATTAATAACATATTATGGTGAAGTAAGAACGGTAATGCCAGCCTCATTGGCTGGTAGGGAGAAATACTTCCAATACATA ATGAATAGACGGATGAGCCTAATATGTTTACACTGTGGATACGTGATTACTGATACTGTAAGTAAACTAGTTAATATTAA AAAATGTCCTAAATGCGGATATATGACTTTGGCACCAGTTAAAGGAGATGCTAGAAAAGAAACCATAATTGTTAGAAAGG CTTTAAATAGAACAAAATTACGTGGGGAAGAAAAAACTGTTCTTGAAGATCTTAGGAAACGGGCAATACTCTATTCGCAA TTCGGAGAATTAGCTCTAAAGATTCTAGCTTCTAGAGGAATCGGAGTAAGCGAGGCTATACGTGTGATTAATCGTGTGCT TGAAGGCTATGATTTATATAATGAATTGTATGAGAGTGAGAAGAAGTATCTAAGAATTAAAACTTATTTAAAAGATAATG ATTAA
Upstream 100 bases:
>100_bases ATTTTCATAACTTTTATAAAAGATTTTGTTTCGTTATCTATAATAATGCAGCGACTATTAAAAAGGGTTTTATCCCTCTT ATTATAAGGGAAAATAAACT
Downstream 100 bases:
>100_bases GCTTCTTCAGGTATTATTCCTGCGATACGAAATGTTTCTATAACTTCCACTCCATGCTTTCTACTAGGTCTCTTCCATAT ACCCGGATCATTAGTTATCA
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>934_residues MTNLVKCLQEIGYKKLTSLQIKAFKAIYKEKNSVIIVAPTGSGKTEAALLPIMYKINKHGYKPISAIYITPLRALNRDIK RRMEKLAKCFGVSINLRHGDTPYKLRKYIETNPPHILVTTPETFNYILINDKMRKYIANLKYIVIDEFRDLIESKRGILL LTSIYLLEHYLKHKFIKIALTATLKNIRLAMEILSSSALPSNIDVLIDNTLKPIDVKVVVPECKDNDNKCKFLSSILEDK DLIARILRIYDLFRSKRSILVFVNTRSIAEKLGYLLKVVNEKLGANNIHVEVHHGSLSRNHRLKVEEDFRNGRLKGLIAT SSMELGIDVGFIDYVIQYMSPRQVVRLVQRIGRSGHKLSGISRGEIIVQNNTLQILESLVIARRAINGDIEEERIPVKPL DVLAYSIVLYSLITEGINIYDLYSLLIMNPIYRDLDVKEFNDLIEYLKYARLIKVKENIIKPTSRSRLFIYKTTMIPSTK DVIIINVVDDRRIGVLNEEYVVLNISEGDVVVVGGKPWKVIGYDQQNAKLYVEPYNVSENIIIPHWEGENIPVEYKLARE VGSLIRRISLNMKIDDYKTLLLNDNIKLEGINDLADDKTIIIEGNIELGLVIVNINGGSRVNRFMRDLLKSVIQWRYPFL KINAYSTPYAVFITLNNKQYVREVVNTIEQVMHNINRYLTRKSLKRIAVEQGTMHWRIFQVAQRFGALDPEKNKITKAML EAFVDTVIGYEALNEVLWKDYDIESIKQLADLVMNGNVKIISKITSKLTNGGRQLITYYGEVRTVMPASLAGREKYFQYI MNRRMSLICLHCGYVITDTVSKLVNIKKCPKCGYMTLAPVKGDARKETIIVRKALNRTKLRGEEKTVLEDLRKRAILYSQ FGELALKILASRGIGVSEAIRVINRVLEGYDLYNELYESEKKYLRIKTYLKDND
Sequences:
NA
Specific function: NA
COG id: COG1201
COG function: function code R; Lhr-like helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA