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The map label for this gene is ybiT [H]

Identifier: 126455434

GI number: 126455434

Start: 2172236

End: 2173903

Strand: Reverse

Name: ybiT [H]

Synonym: BURPS1106A_2186

Alternate gene names: 126455434

Gene position: 2173903-2172236 (Counterclockwise)

Preceding gene: 126455427

Following gene: 126452549

Centisome position: 54.5

GC content: 62.71

Gene sequence:

>1668_bases
ATGCGGCGCAGCGATTCATCGACTCCTGCTAAAATACCCGGTTTTCCGTCGATCTATCTCCTAACGGGATCTGCCGTGCT
TTCTACCGCCAACATCACGATGCAATTCGGGCCCAAGCCCCTGTTCGAGAACATCTCGGTCAAGTTCGGGGAGGGCAACC
GCTACGGCCTCATCGGGGCGAACGGCTGCGGCAAGTCGACCTTCATGAAGATCCTGGGCGGCGATCTGGAGCCGTCGGCG
GGCAACGTCGCGCTCGAGCCGAACGTTCGGCTCGGCAAGCTGCGCCAGGATCAGTTCGCATACGAGGACGTGCGCGTGCT
CGACGTCGTGATGATGGGCCACACCGAGATGTGGGCCGCGATGACCGAGCGCGACGCGATCTACGCGAACCCCGAGGCGA
CCGACGACGACTACATGCACGCGGCCGAACTCGAGGCGAAGTTCGCCGAGTACGGCGGCTACGACGCCGAGGCGCGCGCG
GGCGCGCTGCTGCTCGGCATCGGCATCGAGGAGAAGTTCCACAGCGGCCCGATGCGCGACGTCGCGCCGGGCTGGAAGCT
GCGGGTGCTGCTCGCGCAGGCGCTGTTCTCGAACCCGGACGTGCTGCTGCTCGACGAGCCGACCAATAACCTCGACATCA
ACTCGATCCGCTGGCTCGAGGACACGCTGAACAACTACGATTCGACGATGATCATCATCTCGCATGATCGTCACTTCCTG
AACTCGGTGTGCACGCACATGGCCGACATGGACTACGGCACGCTGAAGGTCTGGCCGGGCAACTACGACGACTACATGCT
CGCGTCCGCGCAGGCGCGCGAGCGCCAGGCCGCGGCGAATGCGCGCGCGAAGGAGCGCGTGGCCGAGCTGCAGGACTTCG
TGCGCCGCTTCTCGGCGAACAAGTCGAAGGCCCGCCAGGCGACGAGCCGCGCGAAGCAGATCGACAAGATCAAGATCGAG
GAATTCAAGCCGTCGTCGCGCCAGAATCCGTTCATCCGTTTCGAATTCGAGAAGAAGCTGCACAACATCGCGGTCGTCGC
CGATTCGATCACGAAGAAGTACGAGCGCACGATCTTCGAGAATTTCAATTTGTCGGTGCAGCCCGGCGAGCGCATCGCGA
TCATCGGCGAGAACGGCGCGGGCAAGACGACGCTGCTGCGCGCGCTGTTCGGCAACCTGACGCTCGATCACGGCACGGTG
AAGTGGGCCGAGAACGCGAACGTCGGCTACATGCCGCAGGACACGTACGAAGAGTTTCCGAACGACGTCACGCTGATGGA
TTGGATCGACCAGTACCGCAAGGACGGCGACGACGAGACGATGGTGCGCGGCACGCTCGGCCGCCTGCTGTTCTCGGCGG
ACGACATCAAGAAATCGGTGAAGGTGCTCTCCGGCGGGGAGAAGGGCCGGATGATCTGGGGCAAGCTGATGCTCGGCCGT
CACAACGTGCTGCTGATGGACGAGCCGACCAACCACATGGACATGGAATCGATCGAGTCGCTGCAGATCGCGCTCGAGAA
GTTCGAAGGCACGCTGATCTTCGTGTCGCACGACCGCGAATTCGTGAGCGGGCTCGCGAACCGGATCATCGAAGTGACGA
CGGAGGGCAAGCTCGTCGATTTCGGCGGGAATTACGAGGATTTCCTCGCAAGCAAGGGCTTGCAGTAA

Upstream 100 bases:

>100_bases
GCCGCGCACGCGACGGCCGATCGATTTGGCGCCATTTCTTCGTTTCCGCTCTCGGCCGGAAAAGAGCGCATGGCCCGTGC
GTTTTCGGGGCCCGAAGCGC

Downstream 100 bases:

>100_bases
GCAAGCCCTTGCCGGCGTCCCGGTCGAGGCCGGGACGCCGGCCGTCCGGTTCGGCTTTGCGCGACGCGGCGAGCGGCCGT
CCTCGATCGCGATGGGTCGA

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MRRSDSSTPAKIPGFPSIYLLTGSAVLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGGDLEPSA
GNVALEPNVRLGKLRQDQFAYEDVRVLDVVMMGHTEMWAAMTERDAIYANPEATDDDYMHAAELEAKFAEYGGYDAEARA
GALLLGIGIEEKFHSGPMRDVAPGWKLRVLLAQALFSNPDVLLLDEPTNNLDINSIRWLEDTLNNYDSTMIIISHDRHFL
NSVCTHMADMDYGTLKVWPGNYDDYMLASAQARERQAAANARAKERVAELQDFVRRFSANKSKARQATSRAKQIDKIKIE
EFKPSSRQNPFIRFEFEKKLHNIAVVADSITKKYERTIFENFNLSVQPGERIAIIGENGAGKTTLLRALFGNLTLDHGTV
KWAENANVGYMPQDTYEEFPNDVTLMDWIDQYRKDGDDETMVRGTLGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGR
HNVLLMDEPTNHMDMESIESLQIALEKFEGTLIFVSHDREFVSGLANRIIEVTTEGKLVDFGGNYEDFLASKGLQ

Sequences:

>Translated_555_residues
MRRSDSSTPAKIPGFPSIYLLTGSAVLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGGDLEPSA
GNVALEPNVRLGKLRQDQFAYEDVRVLDVVMMGHTEMWAAMTERDAIYANPEATDDDYMHAAELEAKFAEYGGYDAEARA
GALLLGIGIEEKFHSGPMRDVAPGWKLRVLLAQALFSNPDVLLLDEPTNNLDINSIRWLEDTLNNYDSTMIIISHDRHFL
NSVCTHMADMDYGTLKVWPGNYDDYMLASAQARERQAAANARAKERVAELQDFVRRFSANKSKARQATSRAKQIDKIKIE
EFKPSSRQNPFIRFEFEKKLHNIAVVADSITKKYERTIFENFNLSVQPGERIAIIGENGAGKTTLLRALFGNLTLDHGTV
KWAENANVGYMPQDTYEEFPNDVTLMDWIDQYRKDGDDETMVRGTLGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGR
HNVLLMDEPTNHMDMESIESLQIALEKFEGTLIFVSHDREFVSGLANRIIEVTTEGKLVDFGGNYEDFLASKGLQ
>Mature_555_residues
MRRSDSSTPAKIPGFPSIYLLTGSAVLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGGDLEPSA
GNVALEPNVRLGKLRQDQFAYEDVRVLDVVMMGHTEMWAAMTERDAIYANPEATDDDYMHAAELEAKFAEYGGYDAEARA
GALLLGIGIEEKFHSGPMRDVAPGWKLRVLLAQALFSNPDVLLLDEPTNNLDINSIRWLEDTLNNYDSTMIIISHDRHFL
NSVCTHMADMDYGTLKVWPGNYDDYMLASAQARERQAAANARAKERVAELQDFVRRFSANKSKARQATSRAKQIDKIKIE
EFKPSSRQNPFIRFEFEKKLHNIAVVADSITKKYERTIFENFNLSVQPGERIAIIGENGAGKTTLLRALFGNLTLDHGTV
KWAENANVGYMPQDTYEEFPNDVTLMDWIDQYRKDGDDETMVRGTLGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGR
HNVLLMDEPTNHMDMESIESLQIALEKFEGTLIFVSHDREFVSGLANRIIEVTTEGKLVDFGGNYEDFLASKGLQ

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=533, Percent_Identity=32.0825515947467, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI10947137, Length=532, Percent_Identity=29.5112781954887, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI27881506, Length=532, Percent_Identity=29.5112781954887, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI10947135, Length=525, Percent_Identity=28.3809523809524, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI69354671, Length=525, Percent_Identity=28.3809523809524, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI153792144, Length=309, Percent_Identity=23.6245954692557, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=66.4783427495292, Blast_Score=744, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=523, Percent_Identity=31.9311663479924, Blast_Score=279, Evalue=4e-76,
Organism=Escherichia coli, GI1787182, Length=546, Percent_Identity=30.7692307692308, Blast_Score=241, Evalue=9e-65,
Organism=Escherichia coli, GI2367384, Length=527, Percent_Identity=29.9810246679317, Blast_Score=235, Evalue=6e-63,
Organism=Escherichia coli, GI1788165, Length=178, Percent_Identity=29.2134831460674, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788225, Length=230, Percent_Identity=26.9565217391304, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1789672, Length=235, Percent_Identity=25.1063829787234, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786803, Length=222, Percent_Identity=29.2792792792793, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1790467, Length=222, Percent_Identity=24.3243243243243, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1788644, Length=242, Percent_Identity=24.3801652892562, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI87081791, Length=218, Percent_Identity=25.6880733944954, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789864, Length=233, Percent_Identity=23.6051502145923, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=26.4150943396226, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=558, Percent_Identity=29.3906810035842, Blast_Score=232, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI17555318, Length=518, Percent_Identity=28.7644787644788, Blast_Score=232, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17559834, Length=534, Percent_Identity=28.4644194756554, Blast_Score=219, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI115533592, Length=240, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=525, Percent_Identity=30.6666666666667, Blast_Score=251, Evalue=3e-67,
Organism=Saccharomyces cerevisiae, GI6321121, Length=558, Percent_Identity=29.3906810035842, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6323278, Length=421, Percent_Identity=24.4655581947743, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=425, Percent_Identity=24.9411764705882, Blast_Score=120, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=26.2210796915167, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24666836, Length=522, Percent_Identity=31.2260536398467, Blast_Score=264, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24642252, Length=534, Percent_Identity=27.9026217228464, Blast_Score=245, Evalue=6e-65,
Organism=Drosophila melanogaster, GI18859989, Length=534, Percent_Identity=27.9026217228464, Blast_Score=245, Evalue=6e-65,
Organism=Drosophila melanogaster, GI24641342, Length=551, Percent_Identity=29.2196007259528, Blast_Score=225, Evalue=5e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62134; Mature: 62134

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSDSSTPAKIPGFPSIYLLTGSAVLSTANITMQFGPKPLFENISVKFGEGNRYGLIGA
CCCCCCCCCCCCCCCCEEEEEECCHHEEEEEEEEEECCCCCCCCCEEEECCCCEEEEEEC
NGCGKSTFMKILGGDLEPSAGNVALEPNVRLGKLRQDQFAYEDVRVLDVVMMGHTEMWAA
CCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHEEHHHHHCCHHHHHH
MTERDAIYANPEATDDDYMHAAELEAKFAEYGGYDAEARAGALLLGIGIEEKFHSGPMRD
HHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHCCCCCCC
VAPGWKLRVLLAQALFSNPDVLLLDEPTNNLDINSIRWLEDTLNNYDSTMIIISHDRHFL
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHH
NSVCTHMADMDYGTLKVWPGNYDDYMLASAQARERQAAANARAKERVAELQDFVRRFSAN
HHHHHHHHCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KSKARQATSRAKQIDKIKIEEFKPSSRQNPFIRFEFEKKLHNIAVVADSITKKYERTIFE
HHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEHHHHHHEEEEHHHHHHHHHHHHHH
NFNLSVQPGERIAIIGENGAGKTTLLRALFGNLTLDHGTVKWAENANVGYMPQDTYEEFP
CCCEEECCCCEEEEEECCCCCHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCHHHHHCC
NDVTLMDWIDQYRKDGDDETMVRGTLGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGR
CCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
HNVLLMDEPTNHMDMESIESLQIALEKFEGTLIFVSHDREFVSGLANRIIEVTTEGKLVD
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEEECCCEEEE
FGGNYEDFLASKGLQ
CCCCHHHHHHHCCCC
>Mature Secondary Structure
MRRSDSSTPAKIPGFPSIYLLTGSAVLSTANITMQFGPKPLFENISVKFGEGNRYGLIGA
CCCCCCCCCCCCCCCCEEEEEECCHHEEEEEEEEEECCCCCCCCCEEEECCCCEEEEEEC
NGCGKSTFMKILGGDLEPSAGNVALEPNVRLGKLRQDQFAYEDVRVLDVVMMGHTEMWAA
CCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHEEHHHHHCCHHHHHH
MTERDAIYANPEATDDDYMHAAELEAKFAEYGGYDAEARAGALLLGIGIEEKFHSGPMRD
HHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHCCCCCCC
VAPGWKLRVLLAQALFSNPDVLLLDEPTNNLDINSIRWLEDTLNNYDSTMIIISHDRHFL
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHH
NSVCTHMADMDYGTLKVWPGNYDDYMLASAQARERQAAANARAKERVAELQDFVRRFSAN
HHHHHHHHCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KSKARQATSRAKQIDKIKIEEFKPSSRQNPFIRFEFEKKLHNIAVVADSITKKYERTIFE
HHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEHHHHHHEEEEHHHHHHHHHHHHHH
NFNLSVQPGERIAIIGENGAGKTTLLRALFGNLTLDHGTVKWAENANVGYMPQDTYEEFP
CCCEEECCCCEEEEEECCCCCHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCHHHHHCC
NDVTLMDWIDQYRKDGDDETMVRGTLGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGR
CCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
HNVLLMDEPTNHMDMESIESLQIALEKFEGTLIFVSHDREFVSGLANRIIEVTTEGKLVD
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEEECCCEEEE
FGGNYEDFLASKGLQ
CCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]