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The map label for this gene is ycgE [C]

Identifier: 126455386

GI number: 126455386

Start: 2152250

End: 2153281

Strand: Direct

Name: ycgE [C]

Synonym: BURPS1106A_2165

Alternate gene names: 126455386

Gene position: 2152250-2153281 (Clockwise)

Preceding gene: 126452102

Following gene: 126452665

Centisome position: 53.96

GC content: 68.12

Gene sequence:

>1032_bases
ATGCGGCTCAAGATCGGAGAACTGGCGAAACGCTGCGGCCTGACGGTCCGCACGCTGCACCATTACGACGCGATCGGCCT
GCTCAAGCCTTCGGCGCGCGCCGACAACGGCTACCGGCTGTACGACCGCAACGACATCGCCCGGCTCCACCAGATCCAGG
CGCTGCGCCGTTTCGGCCTTGCGCTCGCGGACGTCGGCGCTTATCTGGCCCAGCCCGGCACGCCGCTCGCGTCGATCGTC
TCGCGCCAGATCGCGATGCTCGACCGACAGATCGAGCAGGCGGCGCGGCTTCGCGAGCGTCTCGTGCAGTTGCACCGCGA
GCTCGCCGACGGCGCGCAGCCCGAACTGGCAGACTGGCTCAAGACCCTGGAGTTGATGACCATGTACGACAAGTACTTTT
CCGACGAAGAACTCGCGCGCCTGCCGATGTATCGCAACCGCCAGGCGCCCGACCCGGAGTGGACCGCGCTCGTCGACGCG
GTGCGCGCGCTGATGGACGCGGGCGTCGCGCCCGAGGACGAGCGCGTGCGCGCGCTGTCGGTGCGCTGGATGACGATGCT
CGTGCGCGACACGAACGGCGACCCGCGCATTTTCGCGAAGCTGAACCTGATGCACGACCGGGAGCCGTCGATGCAAACGC
ACGTCGGCATCTCGCCCGCGCTGCGCGACTACGTGCTGCGCGCGTTTTCGGAAACGAAGATGCGGATCTACGAGCGCTAT
CTGTCGCCCGAAGAAACGCGCTTCATGCGCGCGAACTACGGCAAGCGCGCGATGCAATGGCCGCAGTTGATGGCGGACGT
CCGCGACGCGATCGAAGCGGGCGTGACGCCATCATCGCCGCAGGGCCGCGCGCTCGCGCAGCGCTGGCTCGAGCTGTTCA
GGCACTACGCGGGCGACGATCCGGCCACGCAGCTCAAGTTCCGCGAAGCGCTCGCGAACGAGCCCGAGCTGATGACGGGC
ACGTGGGCCGACGACGCGCTGCTCGGCTTCGTTCGCGAGGCGATGCAGCATCTGGCGCCGGCGCGCAGATAA

Upstream 100 bases:

>100_bases
GCCGTCGACGGACACCGGCCGCGCCGCGCGCCGATTCCGCTTGACCCTCACGTAGCGTAAGGTTTCACCCTCCACGGTGC
GCATGAAACGGAGGTCCACG

Downstream 100 bases:

>100_bases
AGCCCGCACCGCAGGCACCGCCGAAGCCCGGAGCCGCTGACGATCCCGTTTTCCGGCGCGGCGCGCATCGAAGGTCAGGC
ATCGAGCGCGTGCCTGCGCC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MRLKIGELAKRCGLTVRTLHHYDAIGLLKPSARADNGYRLYDRNDIARLHQIQALRRFGLALADVGAYLAQPGTPLASIV
SRQIAMLDRQIEQAARLRERLVQLHRELADGAQPELADWLKTLELMTMYDKYFSDEELARLPMYRNRQAPDPEWTALVDA
VRALMDAGVAPEDERVRALSVRWMTMLVRDTNGDPRIFAKLNLMHDREPSMQTHVGISPALRDYVLRAFSETKMRIYERY
LSPEETRFMRANYGKRAMQWPQLMADVRDAIEAGVTPSSPQGRALAQRWLELFRHYAGDDPATQLKFREALANEPELMTG
TWADDALLGFVREAMQHLAPARR

Sequences:

>Translated_343_residues
MRLKIGELAKRCGLTVRTLHHYDAIGLLKPSARADNGYRLYDRNDIARLHQIQALRRFGLALADVGAYLAQPGTPLASIV
SRQIAMLDRQIEQAARLRERLVQLHRELADGAQPELADWLKTLELMTMYDKYFSDEELARLPMYRNRQAPDPEWTALVDA
VRALMDAGVAPEDERVRALSVRWMTMLVRDTNGDPRIFAKLNLMHDREPSMQTHVGISPALRDYVLRAFSETKMRIYERY
LSPEETRFMRANYGKRAMQWPQLMADVRDAIEAGVTPSSPQGRALAQRWLELFRHYAGDDPATQLKFREALANEPELMTG
TWADDALLGFVREAMQHLAPARR
>Mature_343_residues
MRLKIGELAKRCGLTVRTLHHYDAIGLLKPSARADNGYRLYDRNDIARLHQIQALRRFGLALADVGAYLAQPGTPLASIV
SRQIAMLDRQIEQAARLRERLVQLHRELADGAQPELADWLKTLELMTMYDKYFSDEELARLPMYRNRQAPDPEWTALVDA
VRALMDAGVAPEDERVRALSVRWMTMLVRDTNGDPRIFAKLNLMHDREPSMQTHVGISPALRDYVLRAFSETKMRIYERY
LSPEETRFMRANYGKRAMQWPQLMADVRDAIEAGVTPSSPQGRALAQRWLELFRHYAGDDPATQLKFREALANEPELMTG
TWADDALLGFVREAMQHLAPARR

Specific function: Albicidin resistance protein binds to form a complex without antibiotic activity but without catalyzing any further chemical modifications to albicidin [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012925 [H]

Pfam domain/function: PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 39341; Mature: 39341

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKIGELAKRCGLTVRTLHHYDAIGLLKPSARADNGYRLYDRNDIARLHQIQALRRFGL
CCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHH
ALADVGAYLAQPGTPLASIVSRQIAMLDRQIEQAARLRERLVQLHRELADGAQPELADWL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KTLELMTMYDKYFSDEELARLPMYRNRQAPDPEWTALVDAVRALMDAGVAPEDERVRALS
HHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VRWMTMLVRDTNGDPRIFAKLNLMHDREPSMQTHVGISPALRDYVLRAFSETKMRIYERY
HHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LSPEETRFMRANYGKRAMQWPQLMADVRDAIEAGVTPSSPQGRALAQRWLELFRHYAGDD
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PATQLKFREALANEPELMTGTWADDALLGFVREAMQHLAPARR
HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLKIGELAKRCGLTVRTLHHYDAIGLLKPSARADNGYRLYDRNDIARLHQIQALRRFGL
CCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHH
ALADVGAYLAQPGTPLASIVSRQIAMLDRQIEQAARLRERLVQLHRELADGAQPELADWL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KTLELMTMYDKYFSDEELARLPMYRNRQAPDPEWTALVDAVRALMDAGVAPEDERVRALS
HHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VRWMTMLVRDTNGDPRIFAKLNLMHDREPSMQTHVGISPALRDYVLRAFSETKMRIYERY
HHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LSPEETRFMRANYGKRAMQWPQLMADVRDAIEAGVTPSSPQGRALAQRWLELFRHYAGDD
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PATQLKFREALANEPELMTGTWADDALLGFVREAMQHLAPARR
HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2845223 [H]