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The map label for this gene is queC [H]

Identifier: 126455276

GI number: 126455276

Start: 160730

End: 161464

Strand: Direct

Name: queC [H]

Synonym: BURPS1106A_0171

Alternate gene names: 126455276

Gene position: 160730-161464 (Clockwise)

Preceding gene: 126454381

Following gene: 126452181

Centisome position: 4.03

GC content: 66.39

Gene sequence:

>735_bases
GTGATTCGGACAGACGCTAAGGACGGCGCGCTCGTATTGTTTTCCGGCGGCCAGGATTCGGCCACATGTGTGGCCTGGGC
GCTCGAGCGCTATCAGACCGTCGAGACGCTCGGCTTCGATTACGGCCAGCGCCACCGCGTCGAGCTCGAATGTCGCGAGG
GCGTGCGCGATGCGCTGAAGCGGCGTTTTCCGCAGTGGTCGCACAAGCTGGGCGACGATCACCTGATCGATCTGTCGGTG
CTCGGCTCGATCAGCGATACCGCGATGACGCGCGCGATCGAGATCGAGACGGCGTCGAACGGCCTGCCGAACACGTTCGT
GCCGGGCCGCAACCTGCTGTTCATGACGATCGCCGCGGCGATCGCTTATCGGCGCGGGCTGCGCGCGCTCGTCGGCGGCA
TGTGCGAGACCGATTTCTCCGGCTATCCGGACTGCCGCGACGATACGATGAAGGCGCTGCAGGTCGCGCTCAATCTCGGC
ATGGACACGCGCTTCGTGCTGGAAACGCCGCTGATGTGGCTCGACAAGGCCGATACGTGGCGGCTCGCCGAGCAACTGGG
CGGCGCGCCGCTCGTCGAGCTGATCCGCGTCGAGACGCACACGTGCTATGTCGGGGAGCGCTCGGAGCTGCATGACTGGG
GCTTCGGCTGTGGCGAATGCCCGGCATGCAAGCTGCGCAAGCGCGGCTATGACGCCTATCTGCGCGGCGAAAGCGTGACG
GAGGCGCCCGCCTGA

Upstream 100 bases:

>100_bases
CCGTTTTGGGCCGCGCGCACCTGCCTATACTGGGTGGGCCGGCGCAGCCGGCGCGCGTCGGATCACAGGCGCGCTCGCTC
ATCATTCACGGAGTATCACG

Downstream 100 bases:

>100_bases
CGCACGGCTGGCACGGCGCACGCGCGTGGCGCGGGCGGCAACGAGATTCATCGAACAACGGAAAGCGAGCGGCGCGAGCC
GGAACGAAGCAGCATGACGT

Product: exsB protein

Products: NA

Alternate protein names: 7-cyano-7-carbaguanine synthase; PreQ(0) synthase; Queuosine biosynthesis protein queC [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSHKLGDDHLIDLSV
LGSISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIAAAIAYRRGLRALVGGMCETDFSGYPDCRDDTMKALQVALNLG
MDTRFVLETPLMWLDKADTWRLAEQLGGAPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYDAYLRGESVT
EAPA

Sequences:

>Translated_244_residues
MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSHKLGDDHLIDLSV
LGSISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIAAAIAYRRGLRALVGGMCETDFSGYPDCRDDTMKALQVALNLG
MDTRFVLETPLMWLDKADTWRLAEQLGGAPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYDAYLRGESVT
EAPA
>Mature_244_residues
MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSHKLGDDHLIDLSV
LGSISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIAAAIAYRRGLRALVGGMCETDFSGYPDCRDDTMKALQVALNLG
MDTRFVLETPLMWLDKADTWRLAEQLGGAPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYDAYLRGESVT
EAPA

Specific function: Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) [H]

COG id: COG0603

COG function: function code R; Predicted PP-loop superfamily ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the queC family [H]

Homologues:

Organism=Escherichia coli, GI1786648, Length=229, Percent_Identity=46.2882096069869, Blast_Score=203, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018317
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06508 ExsB [H]

EC number: NA

Molecular weight: Translated: 27142; Mature: 27142

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALK
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHH
RRFPQWSHKLGDDHLIDLSVLGSISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIAAA
HHCCHHHHHCCCCCEEEHHHHCCCHHHHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHH
IAYRRGLRALVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTW
HHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHCCHHHHCCCHHH
RLAEQLGGAPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYDAYLRGESVT
HHHHHHCCCHHHHHHHHHCEEEECCCCCCHHHCCCCCCCCCHHHHHHCCCCEEECCCCCC
EAPA
CCCC
>Mature Secondary Structure
MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALK
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHH
RRFPQWSHKLGDDHLIDLSVLGSISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIAAA
HHCCHHHHHCCCCCEEEHHHHCCCHHHHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHH
IAYRRGLRALVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTW
HHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHCCHHHHCCCHHH
RLAEQLGGAPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYDAYLRGESVT
HHHHHHCCCHHHHHHHHHCEEEECCCCCCHHHCCCCCCCCCHHHHHHCCCCEEECCCCCC
EAPA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA