| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455271
Identifier: 126455271
GI number: 126455271
Start: 2590142
End: 2590489
Strand: Direct
Name: 126455271
Synonym: BURPS1106A_2629
Alternate gene names: NA
Gene position: 2590142-2590489 (Clockwise)
Preceding gene: 126454324
Following gene: 126452154
Centisome position: 64.94
GC content: 71.55
Gene sequence:
>348_bases ATGAAACCGATTCTCGTTCGCGCCGCGCCGCTCGCGGCGCTCATCGCGGCCGCGTCGCTGAGCGGATGCGTCGCGCCGCC GTCGACGACGGTCCTGAGCCGGCTGCCCGAACAGGCGGCGGGCACGACGACGCACACGCTCACGCCCGACGAGCGCAAGC GCTACGACGAAATCGACCGGCAGGTGCTGCGCGAGCAGAACGCGGCAATCGCGGCCGAGGATGCGGCGCGCGCCTGGTCG TATTACTCTCCGCCGCCCGTCACCTACTACGGCGGCTACTATGGCGGCGGCTGGGGGCGCGGTTGGGGCTCGGGATTCGG CTACGGCTACCCGGGCTGGTGGTGGTGA
Upstream 100 bases:
>100_bases CCGCGCAACGGCACTGATTCGCCCGCCCGCCTGCGTGCGGGCAATGCGCCGCGCCCGCCATCCGACGGAGCGGCCCCGGC ACAAGCCAGGAGGCAGTAGC
Downstream 100 bases:
>100_bases AATCGACGAATGCCGAGCAATTAAAAACCAGCAGGAAGCAAAAAAGCCAAAAGCGCGGCCGAAAGACCGCGCTTTTTGAT TGGGTTTCCGAAGCATCTCG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MKPILVRAAPLAALIAAASLSGCVAPPSTTVLSRLPEQAAGTTTHTLTPDERKRYDEIDRQVLREQNAAIAAEDAARAWS YYSPPPVTYYGGYYGGGWGRGWGSGFGYGYPGWWW
Sequences:
>Translated_115_residues MKPILVRAAPLAALIAAASLSGCVAPPSTTVLSRLPEQAAGTTTHTLTPDERKRYDEIDRQVLREQNAAIAAEDAARAWS YYSPPPVTYYGGYYGGGWGRGWGSGFGYGYPGWWW >Mature_115_residues MKPILVRAAPLAALIAAASLSGCVAPPSTTVLSRLPEQAAGTTTHTLTPDERKRYDEIDRQVLREQNAAIAAEDAARAWS YYSPPPVTYYGGYYGGGWGRGWGSGFGYGYPGWWW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12483; Mature: 12483
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPILVRAAPLAALIAAASLSGCVAPPSTTVLSRLPEQAAGTTTHTLTPDERKRYDEIDR CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHH QVLREQNAAIAAEDAARAWSYYSPPPVTYYGGYYGGGWGRGWGSGFGYGYPGWWW HHHHHHCCCCCHHHHHHHCCCCCCCCCEECCCEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKPILVRAAPLAALIAAASLSGCVAPPSTTVLSRLPEQAAGTTTHTLTPDERKRYDEIDR CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHH QVLREQNAAIAAEDAARAWSYYSPPPVTYYGGYYGGGWGRGWGSGFGYGYPGWWW HHHHHHCCCCCHHHHHHHCCCCCCCCCEECCCEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA