| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455245
Identifier: 126455245
GI number: 126455245
Start: 121171
End: 122328
Strand: Direct
Name: 126455245
Synonym: BURPS1106A_0124
Alternate gene names: NA
Gene position: 121171-122328 (Clockwise)
Preceding gene: 126455326
Following gene: 126452458
Centisome position: 3.04
GC content: 65.89
Gene sequence:
>1158_bases ATGAAAACGATCTGGAAGTTTTTCGGTCTCGCGGCCGCTGTGTCGGTGTTACTTGCCGGCTGCGGCGGCGGGGGCGACAA CAGCGGGCAAACGGGCACGCTGCACGTCGCGATGACGGATGCGCCGTCGTGCGGTTTTGATCATATCTATGTGACCGTCG CGAAGGTGCGCGTCAACATGAGTGCGCAAGCAGGCGACAACGATTCGGGCTGGACCGACGTCGCGCTCGCGGCGCCGCAA AAGGTCGACTTGCTGTCGCTGACCAACGGCGTGCTCGCCGACCTCGGCCGGAACGCGCTGCCAGCCGGCCAGTACCAGCA AGTGCGCCTCGTGCTCGCGCAGAACCAGGGCAACACGCTTGCGAACTCGATCGTGCCGACGGGCGGCACCGAGCAGCCGC TCGCGACGCCGAGCGCCACGCAAAGCGGCTACAAGATCATCACGCCGTTCACGGTGCAGCCGAACACGCTCGTCGATCTC GTTCTCGACTTCAATGCGTGCAAGTCGATCGTTCAGCGCGGCAACGGCACGTACGCGCTCAAGCCTGTCGTGACCGCCAC GCCGACGGTCGTCAGCGGCGCGATCGACGGCTATGTCTCGCCGACCGAAGCCGGCGCGACGGTCTACGCGGAGCAGAACG GTCACGTGATCAAGGGCACGCTCGCCGACAGCACCGGCCACTTCGTGCTGACGCCGCTCGTGCAGAGCTCGACGAACGGC AACTACGACATCGTGATCACGCAGAACAACGTGTCGACCGGGATCGTACGTTCGGTGCCTGTCGTCGTGAACACGACGAC GTCGGTATCGACCTCGTCCGCGCCGATCACGCTGCCCGCATCGACGATGAACATGGTGAGCGGCACGGCCACGGCGAGCG CGGATGCGATCCTGCGCGCGCTGCAGATGGTGAACTCGCTGCCGTATGAGATTGCGTCGACGAACGCGAATCTCGACACG GGCGCCTATGCGCTGACGCTGCCGACCGCGGCGCCGATCGTCGGCACGTATTCGGGTTCGCTGCCGGTCGCGATGAGCGC GGCGCCGAGCGCCGCGGGCCAGTACACGATCGAGGCCGATGCGGCGAACGGCGCGACGCAGCAGCAGCCGGCGAACATCA CGGCGGGCTCGGTCTCGAACGTCAATTTCGGGTTCTGA
Upstream 100 bases:
>100_bases ACAAGATGCAAAAGTTACGGCTGGTTGCAAAAGCGTAAAAGACTGACACCGGTCTGCTGCGTATCCTTCGCTCACCAAGA CCAATAGTTGGGGGAGGGTC
Downstream 100 bases:
>100_bases TCGTCGGCAATACGAACGGAAGGGGCATGGCCCCTTCCCCTCTACATTCACGGGGAAACAACATGAAGAAAATCATCATC GCATTGGCGGTTTCCGCAGG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MKTIWKFFGLAAAVSVLLAGCGGGGDNSGQTGTLHVAMTDAPSCGFDHIYVTVAKVRVNMSAQAGDNDSGWTDVALAAPQ KVDLLSLTNGVLADLGRNALPAGQYQQVRLVLAQNQGNTLANSIVPTGGTEQPLATPSATQSGYKIITPFTVQPNTLVDL VLDFNACKSIVQRGNGTYALKPVVTATPTVVSGAIDGYVSPTEAGATVYAEQNGHVIKGTLADSTGHFVLTPLVQSSTNG NYDIVITQNNVSTGIVRSVPVVVNTTTSVSTSSAPITLPASTMNMVSGTATASADAILRALQMVNSLPYEIASTNANLDT GAYALTLPTAAPIVGTYSGSLPVAMSAAPSAAGQYTIEADAANGATQQQPANITAGSVSNVNFGF
Sequences:
>Translated_385_residues MKTIWKFFGLAAAVSVLLAGCGGGGDNSGQTGTLHVAMTDAPSCGFDHIYVTVAKVRVNMSAQAGDNDSGWTDVALAAPQ KVDLLSLTNGVLADLGRNALPAGQYQQVRLVLAQNQGNTLANSIVPTGGTEQPLATPSATQSGYKIITPFTVQPNTLVDL VLDFNACKSIVQRGNGTYALKPVVTATPTVVSGAIDGYVSPTEAGATVYAEQNGHVIKGTLADSTGHFVLTPLVQSSTNG NYDIVITQNNVSTGIVRSVPVVVNTTTSVSTSSAPITLPASTMNMVSGTATASADAILRALQMVNSLPYEIASTNANLDT GAYALTLPTAAPIVGTYSGSLPVAMSAAPSAAGQYTIEADAANGATQQQPANITAGSVSNVNFGF >Mature_385_residues MKTIWKFFGLAAAVSVLLAGCGGGGDNSGQTGTLHVAMTDAPSCGFDHIYVTVAKVRVNMSAQAGDNDSGWTDVALAAPQ KVDLLSLTNGVLADLGRNALPAGQYQQVRLVLAQNQGNTLANSIVPTGGTEQPLATPSATQSGYKIITPFTVQPNTLVDL VLDFNACKSIVQRGNGTYALKPVVTATPTVVSGAIDGYVSPTEAGATVYAEQNGHVIKGTLADSTGHFVLTPLVQSSTNG NYDIVITQNNVSTGIVRSVPVVVNTTTSVSTSSAPITLPASTMNMVSGTATASADAILRALQMVNSLPYEIASTNANLDT GAYALTLPTAAPIVGTYSGSLPVAMSAAPSAAGQYTIEADAANGATQQQPANITAGSVSNVNFGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39140; Mature: 39140
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIWKFFGLAAAVSVLLAGCGGGGDNSGQTGTLHVAMTDAPSCGFDHIYVTVAKVRVNM CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEEEE SAQAGDNDSGWTDVALAAPQKVDLLSLTNGVLADLGRNALPAGQYQQVRLVLAQNQGNTL EECCCCCCCCCEEEEEECCCCEEEEHHCCHHHHHCCCCCCCCCCCEEEEEEEEECCCCCH ANSIVPTGGTEQPLATPSATQSGYKIITPFTVQPNTLVDLVLDFNACKSIVQRGNGTYAL HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECHHHHHHHHHCCCCCEEE KPVVTATPTVVSGAIDGYVSPTEAGATVYAEQNGHVIKGTLADSTGHFVLTPLVQSSTNG EEEEECCCHHEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCC NYDIVITQNNVSTGIVRSVPVVVNTTTSVSTSSAPITLPASTMNMVSGTATASADAILRA CEEEEEECCCCCCCCEEECCEEEECCCCCCCCCCCEEECHHHHHHHCCCCCCHHHHHHHH LQMVNSLPYEIASTNANLDTGAYALTLPTAAPIVGTYSGSLPVAMSAAPSAAGQYTIEAD HHHHHCCCCEEECCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEECCCCCCCEEEEEEC AANGATQQQPANITAGSVSNVNFGF CCCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MKTIWKFFGLAAAVSVLLAGCGGGGDNSGQTGTLHVAMTDAPSCGFDHIYVTVAKVRVNM CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEEEE SAQAGDNDSGWTDVALAAPQKVDLLSLTNGVLADLGRNALPAGQYQQVRLVLAQNQGNTL EECCCCCCCCCEEEEEECCCCEEEEHHCCHHHHHCCCCCCCCCCCEEEEEEEEECCCCCH ANSIVPTGGTEQPLATPSATQSGYKIITPFTVQPNTLVDLVLDFNACKSIVQRGNGTYAL HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECHHHHHHHHHCCCCCEEE KPVVTATPTVVSGAIDGYVSPTEAGATVYAEQNGHVIKGTLADSTGHFVLTPLVQSSTNG EEEEECCCHHEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCC NYDIVITQNNVSTGIVRSVPVVVNTTTSVSTSSAPITLPASTMNMVSGTATASADAILRA CEEEEEECCCCCCCCEEECCEEEECCCCCCCCCCCEEECHHHHHHHCCCCCCHHHHHHHH LQMVNSLPYEIASTNANLDTGAYALTLPTAAPIVGTYSGSLPVAMSAAPSAAGQYTIEAD HHHHHCCCCEEECCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEECCCCCCCEEEEEEC AANGATQQQPANITAGSVSNVNFGF CCCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA