Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126455245

Identifier: 126455245

GI number: 126455245

Start: 121171

End: 122328

Strand: Direct

Name: 126455245

Synonym: BURPS1106A_0124

Alternate gene names: NA

Gene position: 121171-122328 (Clockwise)

Preceding gene: 126455326

Following gene: 126452458

Centisome position: 3.04

GC content: 65.89

Gene sequence:

>1158_bases
ATGAAAACGATCTGGAAGTTTTTCGGTCTCGCGGCCGCTGTGTCGGTGTTACTTGCCGGCTGCGGCGGCGGGGGCGACAA
CAGCGGGCAAACGGGCACGCTGCACGTCGCGATGACGGATGCGCCGTCGTGCGGTTTTGATCATATCTATGTGACCGTCG
CGAAGGTGCGCGTCAACATGAGTGCGCAAGCAGGCGACAACGATTCGGGCTGGACCGACGTCGCGCTCGCGGCGCCGCAA
AAGGTCGACTTGCTGTCGCTGACCAACGGCGTGCTCGCCGACCTCGGCCGGAACGCGCTGCCAGCCGGCCAGTACCAGCA
AGTGCGCCTCGTGCTCGCGCAGAACCAGGGCAACACGCTTGCGAACTCGATCGTGCCGACGGGCGGCACCGAGCAGCCGC
TCGCGACGCCGAGCGCCACGCAAAGCGGCTACAAGATCATCACGCCGTTCACGGTGCAGCCGAACACGCTCGTCGATCTC
GTTCTCGACTTCAATGCGTGCAAGTCGATCGTTCAGCGCGGCAACGGCACGTACGCGCTCAAGCCTGTCGTGACCGCCAC
GCCGACGGTCGTCAGCGGCGCGATCGACGGCTATGTCTCGCCGACCGAAGCCGGCGCGACGGTCTACGCGGAGCAGAACG
GTCACGTGATCAAGGGCACGCTCGCCGACAGCACCGGCCACTTCGTGCTGACGCCGCTCGTGCAGAGCTCGACGAACGGC
AACTACGACATCGTGATCACGCAGAACAACGTGTCGACCGGGATCGTACGTTCGGTGCCTGTCGTCGTGAACACGACGAC
GTCGGTATCGACCTCGTCCGCGCCGATCACGCTGCCCGCATCGACGATGAACATGGTGAGCGGCACGGCCACGGCGAGCG
CGGATGCGATCCTGCGCGCGCTGCAGATGGTGAACTCGCTGCCGTATGAGATTGCGTCGACGAACGCGAATCTCGACACG
GGCGCCTATGCGCTGACGCTGCCGACCGCGGCGCCGATCGTCGGCACGTATTCGGGTTCGCTGCCGGTCGCGATGAGCGC
GGCGCCGAGCGCCGCGGGCCAGTACACGATCGAGGCCGATGCGGCGAACGGCGCGACGCAGCAGCAGCCGGCGAACATCA
CGGCGGGCTCGGTCTCGAACGTCAATTTCGGGTTCTGA

Upstream 100 bases:

>100_bases
ACAAGATGCAAAAGTTACGGCTGGTTGCAAAAGCGTAAAAGACTGACACCGGTCTGCTGCGTATCCTTCGCTCACCAAGA
CCAATAGTTGGGGGAGGGTC

Downstream 100 bases:

>100_bases
TCGTCGGCAATACGAACGGAAGGGGCATGGCCCCTTCCCCTCTACATTCACGGGGAAACAACATGAAGAAAATCATCATC
GCATTGGCGGTTTCCGCAGG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKTIWKFFGLAAAVSVLLAGCGGGGDNSGQTGTLHVAMTDAPSCGFDHIYVTVAKVRVNMSAQAGDNDSGWTDVALAAPQ
KVDLLSLTNGVLADLGRNALPAGQYQQVRLVLAQNQGNTLANSIVPTGGTEQPLATPSATQSGYKIITPFTVQPNTLVDL
VLDFNACKSIVQRGNGTYALKPVVTATPTVVSGAIDGYVSPTEAGATVYAEQNGHVIKGTLADSTGHFVLTPLVQSSTNG
NYDIVITQNNVSTGIVRSVPVVVNTTTSVSTSSAPITLPASTMNMVSGTATASADAILRALQMVNSLPYEIASTNANLDT
GAYALTLPTAAPIVGTYSGSLPVAMSAAPSAAGQYTIEADAANGATQQQPANITAGSVSNVNFGF

Sequences:

>Translated_385_residues
MKTIWKFFGLAAAVSVLLAGCGGGGDNSGQTGTLHVAMTDAPSCGFDHIYVTVAKVRVNMSAQAGDNDSGWTDVALAAPQ
KVDLLSLTNGVLADLGRNALPAGQYQQVRLVLAQNQGNTLANSIVPTGGTEQPLATPSATQSGYKIITPFTVQPNTLVDL
VLDFNACKSIVQRGNGTYALKPVVTATPTVVSGAIDGYVSPTEAGATVYAEQNGHVIKGTLADSTGHFVLTPLVQSSTNG
NYDIVITQNNVSTGIVRSVPVVVNTTTSVSTSSAPITLPASTMNMVSGTATASADAILRALQMVNSLPYEIASTNANLDT
GAYALTLPTAAPIVGTYSGSLPVAMSAAPSAAGQYTIEADAANGATQQQPANITAGSVSNVNFGF
>Mature_385_residues
MKTIWKFFGLAAAVSVLLAGCGGGGDNSGQTGTLHVAMTDAPSCGFDHIYVTVAKVRVNMSAQAGDNDSGWTDVALAAPQ
KVDLLSLTNGVLADLGRNALPAGQYQQVRLVLAQNQGNTLANSIVPTGGTEQPLATPSATQSGYKIITPFTVQPNTLVDL
VLDFNACKSIVQRGNGTYALKPVVTATPTVVSGAIDGYVSPTEAGATVYAEQNGHVIKGTLADSTGHFVLTPLVQSSTNG
NYDIVITQNNVSTGIVRSVPVVVNTTTSVSTSSAPITLPASTMNMVSGTATASADAILRALQMVNSLPYEIASTNANLDT
GAYALTLPTAAPIVGTYSGSLPVAMSAAPSAAGQYTIEADAANGATQQQPANITAGSVSNVNFGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39140; Mature: 39140

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIWKFFGLAAAVSVLLAGCGGGGDNSGQTGTLHVAMTDAPSCGFDHIYVTVAKVRVNM
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEEEE
SAQAGDNDSGWTDVALAAPQKVDLLSLTNGVLADLGRNALPAGQYQQVRLVLAQNQGNTL
EECCCCCCCCCEEEEEECCCCEEEEHHCCHHHHHCCCCCCCCCCCEEEEEEEEECCCCCH
ANSIVPTGGTEQPLATPSATQSGYKIITPFTVQPNTLVDLVLDFNACKSIVQRGNGTYAL
HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECHHHHHHHHHCCCCCEEE
KPVVTATPTVVSGAIDGYVSPTEAGATVYAEQNGHVIKGTLADSTGHFVLTPLVQSSTNG
EEEEECCCHHEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCC
NYDIVITQNNVSTGIVRSVPVVVNTTTSVSTSSAPITLPASTMNMVSGTATASADAILRA
CEEEEEECCCCCCCCEEECCEEEECCCCCCCCCCCEEECHHHHHHHCCCCCCHHHHHHHH
LQMVNSLPYEIASTNANLDTGAYALTLPTAAPIVGTYSGSLPVAMSAAPSAAGQYTIEAD
HHHHHCCCCEEECCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEECCCCCCCEEEEEEC
AANGATQQQPANITAGSVSNVNFGF
CCCCCCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure
MKTIWKFFGLAAAVSVLLAGCGGGGDNSGQTGTLHVAMTDAPSCGFDHIYVTVAKVRVNM
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEEEE
SAQAGDNDSGWTDVALAAPQKVDLLSLTNGVLADLGRNALPAGQYQQVRLVLAQNQGNTL
EECCCCCCCCCEEEEEECCCCEEEEHHCCHHHHHCCCCCCCCCCCEEEEEEEEECCCCCH
ANSIVPTGGTEQPLATPSATQSGYKIITPFTVQPNTLVDLVLDFNACKSIVQRGNGTYAL
HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECHHHHHHHHHCCCCCEEE
KPVVTATPTVVSGAIDGYVSPTEAGATVYAEQNGHVIKGTLADSTGHFVLTPLVQSSTNG
EEEEECCCHHEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCC
NYDIVITQNNVSTGIVRSVPVVVNTTTSVSTSSAPITLPASTMNMVSGTATASADAILRA
CEEEEEECCCCCCCCEEECCEEEECCCCCCCCCCCEEECHHHHHHHCCCCCCHHHHHHHH
LQMVNSLPYEIASTNANLDTGAYALTLPTAAPIVGTYSGSLPVAMSAAPSAAGQYTIEAD
HHHHHCCCCEEECCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEECCCCCCCEEEEEEC
AANGATQQQPANITAGSVSNVNFGF
CCCCCCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA