Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126455242

Identifier: 126455242

GI number: 126455242

Start: 2908456

End: 2908716

Strand: Direct

Name: 126455242

Synonym: BURPS1106A_2965

Alternate gene names: NA

Gene position: 2908456-2908716 (Clockwise)

Preceding gene: 126451593

Following gene: 126452464

Centisome position: 72.92

GC content: 70.5

Gene sequence:

>261_bases
ATGGAAAGCCGACACCTGATCGACATGGCCAACCAGATCGGCGCATTCTTCGCATCGATGCCGGATCACGACGAGGCGGT
CGCGGGCATCGCCGATCACATCCGGCGCTTCTGGGAGCCGCGCATGCGGCGCGCGCTGCTCGCGGCGCTCGATGATCCGC
AGGACGAGGCCGCGCGAGACGTCGCGCCCATCGTCCGCGAGGCGATCGATACGCACCGCGCGTCGCTCGAGCCCGCGCCC
GTCGCACCGCACGCCGCGTAG

Upstream 100 bases:

>100_bases
CAGCGCGCGTACACGCGCTTTCGCGCGGAGCAGCTCGCGCTGCTCGAGCAGCGCACGGCCGAGCGCGCGCCGGCCATCGC
CACGGGCAAGTGAGGCCGAC

Downstream 100 bases:

>100_bases
CGCGCGGCGCCCGCCGCGCGCATATCGCACGCGCGGGCCGATGTGCGCCGCGTGGATCGGCATGGCGTGGCATGGGCGTG
GCGTGGCGCGGTGGTCGCTG

Product: formate dehydrogenase, delta subunit

Products: NA

Alternate protein names: NAD-Dependent Formate Dehydrogenase Delta Subunit; NAD-Dependent Formate Dehydrogenase Subunit Delta; Formate Dehydrogenase Subunit Delta; NAD-Dependent Formate Dehydrogenase

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MESRHLIDMANQIGAFFASMPDHDEAVAGIADHIRRFWEPRMRRALLAALDDPQDEAARDVAPIVREAIDTHRASLEPAP
VAPHAA

Sequences:

>Translated_86_residues
MESRHLIDMANQIGAFFASMPDHDEAVAGIADHIRRFWEPRMRRALLAALDDPQDEAARDVAPIVREAIDTHRASLEPAP
VAPHAA
>Mature_86_residues
MESRHLIDMANQIGAFFASMPDHDEAVAGIADHIRRFWEPRMRRALLAALDDPQDEAARDVAPIVREAIDTHRASLEPAP
VAPHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9520; Mature: 9520

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESRHLIDMANQIGAFFASMPDHDEAVAGIADHIRRFWEPRMRRALLAALDDPQDEAARD
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VAPIVREAIDTHRASLEPAPVAPHAA
HHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MESRHLIDMANQIGAFFASMPDHDEAVAGIADHIRRFWEPRMRRALLAALDDPQDEAARD
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VAPIVREAIDTHRASLEPAPVAPHAA
HHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA