| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455240
Identifier: 126455240
GI number: 126455240
Start: 1336377
End: 1336703
Strand: Reverse
Name: 126455240
Synonym: BURPS1106A_1366
Alternate gene names: NA
Gene position: 1336703-1336377 (Counterclockwise)
Preceding gene: 126451634
Following gene: 126454375
Centisome position: 33.51
GC content: 78.29
Gene sequence:
>327_bases GTGACGCGGCGAACGGGAGCAAACGCGATGTGGCGTCGCATCGCACGGCGTGGTGGCGCGCGATATCGCGCGGGCCCGCC GCGCGGCCGGCTCCGCGTGCGCCGCGCGGCACGCGCGCCGCGGTGCGCCGGCGACGCCGTGCGAGGCACGTCCCTACCCG CCCGCGTCGCTCGTATCGCCCGCTCCAGCCGCCCCAGCCGTTCCAGTTGCCTATCCGCTCCTGCGGCGGCACCGGCCGGA CGCCTTGCACCGCGCACCGCCCGGGAACGCGCCGCCGGGCCGGCGGCCGGACGCCGCCGCCGCCGTGTCACAAATGCTTA CGCCTGA
Upstream 100 bases:
>100_bases ATACGACGCCCGTCGTCTATCTGTACATGGACCGGCTGCGCGTGTGGGCCGAGAAGCGCCGCGACCGCCGCTCATCGGGC GGCGCGGCGATCGCGGGCGA
Downstream 100 bases:
>100_bases TACGAAGCCCGTCACCTATTCATCCATGGCGGGCGCGCGTTGCGCGCGCGTGTGCGGCGTACGCCGCACCGCGCCGGCGC CTTAGCCGCGGCGCGCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTRRTGANAMWRRIARRGGARYRAGPPRGRLRVRRAARAPRCAGDAVRGTSLPARVARIARSSRPSRSSCLSAPAAAPAG RLAPRTARERAAGPAAGRRRRRVTNAYA
Sequences:
>Translated_108_residues MTRRTGANAMWRRIARRGGARYRAGPPRGRLRVRRAARAPRCAGDAVRGTSLPARVARIARSSRPSRSSCLSAPAAAPAG RLAPRTARERAAGPAAGRRRRRVTNAYA >Mature_107_residues TRRTGANAMWRRIARRGGARYRAGPPRGRLRVRRAARAPRCAGDAVRGTSLPARVARIARSSRPSRSSCLSAPAAAPAGR LAPRTARERAAGPAAGRRRRRVTNAYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11641; Mature: 11509
Theoretical pI: Translated: 13.02; Mature: 13.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRTGANAMWRRIARRGGARYRAGPPRGRLRVRRAARAPRCAGDAVRGTSLPARVARIA CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH RSSRPSRSSCLSAPAAAPAGRLAPRTARERAAGPAAGRRRRRVTNAYA HCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure TRRTGANAMWRRIARRGGARYRAGPPRGRLRVRRAARAPRCAGDAVRGTSLPARVARIA CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH RSSRPSRSSCLSAPAAAPAGRLAPRTARERAAGPAAGRRRRRVTNAYA HCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA