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The map label for this gene is ugpA [H]

Identifier: 126455200

GI number: 126455200

Start: 3665521

End: 3666405

Strand: Reverse

Name: ugpA [H]

Synonym: BURPS1106A_3754

Alternate gene names: 126455200

Gene position: 3666405-3665521 (Counterclockwise)

Preceding gene: 126453942

Following gene: 126452250

Centisome position: 91.93

GC content: 65.42

Gene sequence:

>885_bases
ATGACACCCCATTCCCGTTTCGGCGCGAGCGTGCTGCCGTACCTGCTCGTCGCGCCGCAGCTCGCGATCACCGCGATCTT
TTTCCTCTGGCCGGCGGGCGTCGCGCTCTGGCAGTCGACGCAAATGCAGGACGCGTTCGGCACGTCGAGCGAGTTCGTCG
GCTTCGCGAACTTCGCGCATCTGTTCGCCGATCCGCTCTACGTCGATTCGTTCAGGACGACGCTCGTGTTCAGCGCGAGC
GTGACCGTCTGCGGGCTCGTCGTATCGCTCCTGCTCGCCGCGTGCGCGGATCGCGTGGTCCGCGGCGCGCGCGCTTACCG
CACGCTGCTCATCTGGCCGTACGCGGTCGCGCCGACGATCGCCGCGGTGCTGTGGGCGTTCCTGTTCAATCCGAGCATCG
GCGTGATCACGTACGCGCTCGCGCGCTTCGGCATCGTCTGGAATCATGCGCTCAACGGCGGGCAGGCGATGCTGCTCGTC
GTGATCGCATCGGTCTGGAAGCAGGTCAGCTACAACTTCCTGTTCTTTTACGCAGGACTGCAGGCGATTCCGCGCTCGCT
GATCGAGGCGGCCGCGATCGACGGCGCGGGCCCCGTGCGGCGCTTCCTTCACATCGCGCTGCCGCTGCTGTCGCCAACGA
GCTTTTTCCTGCTGGTCGTCAATCTCGTCTACGCGTTCTTCGACACGTTTCCGGTGATCGACGCCGCGACCGCGGGCGGC
CCCGGCCAAAGCACGAAGACGCTGATCTACAAGATCTACGCGGAAGGCTTCCAGGGCCTCGACATCGGCAGCTCGGGCGC
GCAATCGGTCGTGCTGATGGTGATCGTCGTCGCGCTGACGGTCGTCCAGTTCCGTTTCGTCGAGCGCAGGGTGCAATACG
CATGA

Upstream 100 bases:

>100_bases
CGCGGCCTTTTCGCGCATGCGGTTGCGCGAGCAAACGGGCTGCGCGGCCCGCCGCGCCCGGCGGCATTCGTCAGACGTTA
GTCCGTTCGGAATCCTGCCG

Downstream 100 bases:

>100_bases
TCGAGAATCGCAAGGGCTTCGACCTGTTCTGCCACGCGGTGCTGATCGCGGGCATCGCGGTCATCGTGTTCCCGGTGTAC
GTCGGGTTCTGCGCGGCGAC

Product: sn-glycerol-3-phosphate transport system permease protein ugpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTPHSRFGASVLPYLLVAPQLAITAIFFLWPAGVALWQSTQMQDAFGTSSEFVGFANFAHLFADPLYVDSFRTTLVFSAS
VTVCGLVVSLLLAACADRVVRGARAYRTLLIWPYAVAPTIAAVLWAFLFNPSIGVITYALARFGIVWNHALNGGQAMLLV
VIASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFLHIALPLLSPTSFFLLVVNLVYAFFDTFPVIDAATAGG
PGQSTKTLIYKIYAEGFQGLDIGSSGAQSVVLMVIVVALTVVQFRFVERRVQYA

Sequences:

>Translated_294_residues
MTPHSRFGASVLPYLLVAPQLAITAIFFLWPAGVALWQSTQMQDAFGTSSEFVGFANFAHLFADPLYVDSFRTTLVFSAS
VTVCGLVVSLLLAACADRVVRGARAYRTLLIWPYAVAPTIAAVLWAFLFNPSIGVITYALARFGIVWNHALNGGQAMLLV
VIASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFLHIALPLLSPTSFFLLVVNLVYAFFDTFPVIDAATAGG
PGQSTKTLIYKIYAEGFQGLDIGSSGAQSVVLMVIVVALTVVQFRFVERRVQYA
>Mature_293_residues
TPHSRFGASVLPYLLVAPQLAITAIFFLWPAGVALWQSTQMQDAFGTSSEFVGFANFAHLFADPLYVDSFRTTLVFSASV
TVCGLVVSLLLAACADRVVRGARAYRTLLIWPYAVAPTIAAVLWAFLFNPSIGVITYALARFGIVWNHALNGGQAMLLVV
IASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFLHIALPLLSPTSFFLLVVNLVYAFFDTFPVIDAATAGGP
GQSTKTLIYKIYAEGFQGLDIGSSGAQSVVLMVIVVALTVVQFRFVERRVQYA

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=287, Percent_Identity=70.7317073170732, Blast_Score=387, Evalue=1e-109,
Organism=Escherichia coli, GI1790465, Length=252, Percent_Identity=32.1428571428571, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787570, Length=250, Percent_Identity=30, Blast_Score=94, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31906; Mature: 31775

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPHSRFGASVLPYLLVAPQLAITAIFFLWPAGVALWQSTQMQDAFGTSSEFVGFANFAH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LFADPLYVDSFRTTLVFSASVTVCGLVVSLLLAACADRVVRGARAYRTLLIWPYAVAPTI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHH
AAVLWAFLFNPSIGVITYALARFGIVWNHALNGGQAMLLVVIASVWKQVSYNFLFFYAGL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QAIPRSLIEAAAIDGAGPVRRFLHIALPLLSPTSFFLLVVNLVYAFFDTFPVIDAATAGG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PGQSTKTLIYKIYAEGFQGLDIGSSGAQSVVLMVIVVALTVVQFRFVERRVQYA
CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA