| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is mhpR [C]
Identifier: 126455165
GI number: 126455165
Start: 2065882
End: 2066298
Strand: Direct
Name: mhpR [C]
Synonym: BURPS1106A_2069
Alternate gene names: 126455165
Gene position: 2065882-2066298 (Clockwise)
Preceding gene: 126453387
Following gene: 126453154
Centisome position: 51.8
GC content: 61.63
Gene sequence:
>417_bases ATGAAACCGTCTCTTACGCTCGAACGACAGGGCCTGATCTGGCAGCGGCTCGCCGATGGCTTGTTCCGCCCGAGCTATAC GCTGCAGGAACGCTCGCGTCGCCTGGGACCCGTCGATCATCTGATGGAATGCGCGGCGCCGGAGCTGGAGACGTTGCAGC ACAGCATTCTCTGGCTGTCAGACCTGGCGGTGCGCAGCGGCACGCTTATGACACTGTGCGAGTCAAACCGTGTGCGTTCG TACTTCATGGTCAATCGTGACAAGCTCGACTACGAAATCAACATCTTGCGTTCCGCCGTCGGGCGCGCCTACCTCGCGTT CTGCCCCGACGACGAGCGTGAGGAAATTCTGGAAGCGCTCCGGCGCAGCCAGCGTCCTGGCGACGAACTGGCGAGCAATC GCCGATACGTCGCTTAG
Upstream 100 bases:
>100_bases GTATTCGCTTTGAACGTCGCGCCGACATTCACGAAGCGTTCCTCAAACTCGGCTGTTGCCTGATCTGCTGGAATACCCTG CGGCGAGCCCAACAGCCTTT
Downstream 100 bases:
>100_bases CTAGTGCGTGAGACACGGGCACGCGGCTACGGGGTGCGCGAACGGAGCTTTGGCGGCGCATGCGACAAGTCACGCTCGGT TTACGACGACGGGTTGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator For Mhp Operon; IclR Family Transcriptional Regulator; Transcriptional Regulator Family Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKPSLTLERQGLIWQRLADGLFRPSYTLQERSRRLGPVDHLMECAAPELETLQHSILWLSDLAVRSGTLMTLCESNRVRS YFMVNRDKLDYEINILRSAVGRAYLAFCPDDEREEILEALRRSQRPGDELASNRRYVA
Sequences:
>Translated_138_residues MKPSLTLERQGLIWQRLADGLFRPSYTLQERSRRLGPVDHLMECAAPELETLQHSILWLSDLAVRSGTLMTLCESNRVRS YFMVNRDKLDYEINILRSAVGRAYLAFCPDDEREEILEALRRSQRPGDELASNRRYVA >Mature_138_residues MKPSLTLERQGLIWQRLADGLFRPSYTLQERSRRLGPVDHLMECAAPELETLQHSILWLSDLAVRSGTLMTLCESNRVRS YFMVNRDKLDYEINILRSAVGRAYLAFCPDDEREEILEALRRSQRPGDELASNRRYVA
Specific function: Activator Of The Mhprabcdef Operon Coding For Components Of The 3-Hydroxyphenylpropionate Degradation Pathway. [C]
COG id: COG1414
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16028; Mature: 16028
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSLTLERQGLIWQRLADGLFRPSYTLQERSRRLGPVDHLMECAAPELETLQHSILWLS CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHH DLAVRSGTLMTLCESNRVRSYFMVNRDKLDYEINILRSAVGRAYLAFCPDDEREEILEAL HHHHHCCCEEEECCCCCCHHHEEECCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHH RRSQRPGDELASNRRYVA HHCCCCCHHHHCCCCCCC >Mature Secondary Structure MKPSLTLERQGLIWQRLADGLFRPSYTLQERSRRLGPVDHLMECAAPELETLQHSILWLS CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHH DLAVRSGTLMTLCESNRVRSYFMVNRDKLDYEINILRSAVGRAYLAFCPDDEREEILEAL HHHHHCCCEEEECCCCCCHHHEEECCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHH RRSQRPGDELASNRRYVA HHCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA