| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is aprE [H]
Identifier: 126455129
GI number: 126455129
Start: 2045412
End: 2046821
Strand: Reverse
Name: aprE [H]
Synonym: BURPS1106A_2059
Alternate gene names: 126455129
Gene position: 2046821-2045412 (Counterclockwise)
Preceding gene: 126454806
Following gene: 126451956
Centisome position: 51.32
GC content: 64.11
Gene sequence:
>1410_bases ATGAAGCTCATTGCGGCGATCTTCAGGCCGTTTCTGTCGCTGGCCGATGCGGTGCTCGGCTACTTCGAGCGCCACGCCTT CGAACCGGCGTCGCCCGAGGGGCGGCAATCCTGGCGCGGCAGCGCGTTGGGGCTCGAGGAGGCGTCCATTGCACCGGCGC GGCGTGCCGCCGCGCTGATCCCGACGGTCATGCTCGCGCTGCTGATCGTGCTCGTTCTGTGGGCCACGTTCTTCAAGATC GACATCATTGCGGCGGGCCAGGGCAAGGTCATTCCTTCCACGACGGTTCAGCAACTCTCGACGCTGGAGGGCGGCATCGT GCGGGAGTTGCTCGTGCGTGAAGGGCAGATCGTCAAGAAGGGGCAGCCGCTCGTTCGACTCGATCCGGTCGTGGCGCAGG GCGCCGTGACCGAGCAGGCCGCCACGCGAGAGGGATTGATGGCCTCGATTGCGAGATTGCAGGCTGAAGCCGACGGCAAG GCAACGCCTTTGTATCCCGCCGGCCTGAAGCCGGAAATCGTGAGCGAGGAGGAGCACGTGCGGGCGCAACGGGCGGAGGC GCTGAATTCCACCATCGAGGTGCTGCAGCAGCAGCGCGCCGCCAAGCAGGCGGAGGCGGCCGACTACCGCGGCCGGATTC CGCAGTACGTGAACAATCAGCATCTGTTGGATGATCAGATCCAGCGCATGTTGCCGCTGGTCGGAGTGGGGTCCGTGGCG CCAAACGAGATCACCAATCTCCAACGCGAGCGCGGCAATCTGGCCGCGCAGATCATCACGACACGCGAAGGCGCGGCACA GGCGTCCGCGCAGATTGCCGAAGCGAGCCACAAAATCGAGGAAAAGATCTCCACCTTCCGCAGCGAGGCGCGGGAAGAGC TGGCCAGAAAGCAGGTCCAGCTGCAGGCGCTGGAGGGCACGCTGTCCGGCAAGCAGGACATCCTCGACCGGACGTTGATC CGCTCCCCCGTGAACGGCATCGTGAAGACGCTTTACATCACAACGATTGGCGGTGTGGCATCGCCGGGCAAGAGCGTGAT CGACATCGTTCCGACCAACGATTCGCTGCTGATCGAGGCTCGCATCCAGCCGCAGGACATTGCCTATATCAGGGTGGGAG ATGACGCCAAAGTCAGGATTACGGCGTTCGACTCCGGCGCGCTGGGTTCGCTGGATGCGAAGGTCGAACTGATCAGCCCG GACAGTCAGGCCGACGAGCGCAGTGGGAGCCTCTACTACAAGGTTCAGGTTCGCACGCACAGCAGCGTGGTGGCCACGCA GGTCGGCGACCTGAACATCTTGCCGGGGATGGTGGCCGAGGTCGATGTGATCACCGGGCGTCGGACCATCATGTCCTATA TTCTGCGGCCGATCGTACGCGGGATGAGTCGCGCGATGAGCGAGCGTTGA
Upstream 100 bases:
>100_bases GTGGTTGCGTGGTGCTCGATGGCCCTCGGGACGACGTGCTCGCGAAGCTCTCGGGCCGCACTCAGCAAACTGCCGGCGCA AAGGGAATGTCATCATGTCC
Downstream 100 bases:
>100_bases CGCAGTCCGCGCCGTCGAACTTGGCTGCGGGCGGGTGATTTCGGCAGCACTGCCGGCAGGGCATTCGCTTCGCGTTTTCC GCTTCGTGCCGACACAGCGA
Product: HlyD family secretion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MKLIAAIFRPFLSLADAVLGYFERHAFEPASPEGRQSWRGSALGLEEASIAPARRAAALIPTVMLALLIVLVLWATFFKI DIIAAGQGKVIPSTTVQQLSTLEGGIVRELLVREGQIVKKGQPLVRLDPVVAQGAVTEQAATREGLMASIARLQAEADGK ATPLYPAGLKPEIVSEEEHVRAQRAEALNSTIEVLQQQRAAKQAEAADYRGRIPQYVNNQHLLDDQIQRMLPLVGVGSVA PNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKIEEKISTFRSEAREELARKQVQLQALEGTLSGKQDILDRTLI RSPVNGIVKTLYITTIGGVASPGKSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELISP DSQADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRPIVRGMSRAMSER
Sequences:
>Translated_469_residues MKLIAAIFRPFLSLADAVLGYFERHAFEPASPEGRQSWRGSALGLEEASIAPARRAAALIPTVMLALLIVLVLWATFFKI DIIAAGQGKVIPSTTVQQLSTLEGGIVRELLVREGQIVKKGQPLVRLDPVVAQGAVTEQAATREGLMASIARLQAEADGK ATPLYPAGLKPEIVSEEEHVRAQRAEALNSTIEVLQQQRAAKQAEAADYRGRIPQYVNNQHLLDDQIQRMLPLVGVGSVA PNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKIEEKISTFRSEAREELARKQVQLQALEGTLSGKQDILDRTLI RSPVNGIVKTLYITTIGGVASPGKSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELISP DSQADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRPIVRGMSRAMSER >Mature_469_residues MKLIAAIFRPFLSLADAVLGYFERHAFEPASPEGRQSWRGSALGLEEASIAPARRAAALIPTVMLALLIVLVLWATFFKI DIIAAGQGKVIPSTTVQQLSTLEGGIVRELLVREGQIVKKGQPLVRLDPVVAQGAVTEQAATREGLMASIARLQAEADGK ATPLYPAGLKPEIVSEEEHVRAQRAEALNSTIEVLQQQRAAKQAEAADYRGRIPQYVNNQHLLDDQIQRMLPLVGVGSVA PNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKIEEKISTFRSEAREELARKQVQLQALEGTLSGKQDILDRTLI RSPVNGIVKTLYITTIGGVASPGKSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELISP DSQADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRPIVRGMSRAMSER
Specific function: Involved in the secretion of alkaline protease [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 50805; Mature: 50805
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS00543 HLYD_FAMILY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIAAIFRPFLSLADAVLGYFERHAFEPASPEGRQSWRGSALGLEEASIAPARRAAALI CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHCCCHHHHHHHHH PTVMLALLIVLVLWATFFKIDIIAAGQGKVIPSTTVQQLSTLEGGIVRELLVREGQIVKK HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEC GQPLVRLDPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYPAGLKPEIVSEEEHV CCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH RAQRAEALNSTIEVLQQQRAAKQAEAADYRGRIPQYVNNQHLLDDQIQRMLPLVGVGSVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCC PNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKIEEKISTFRSEAREELARKQVQ CHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQALEGTLSGKQDILDRTLIRSPVNGIVKTLYITTIGGVASPGKSVIDIVPTNDSLLIEA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEE RIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELISPDSQADERSGSLYYKVQVRTH ECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEC SSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRPIVRGMSRAMSER CCCHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLIAAIFRPFLSLADAVLGYFERHAFEPASPEGRQSWRGSALGLEEASIAPARRAAALI CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHCCCHHHHHHHHH PTVMLALLIVLVLWATFFKIDIIAAGQGKVIPSTTVQQLSTLEGGIVRELLVREGQIVKK HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEC GQPLVRLDPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYPAGLKPEIVSEEEHV CCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH RAQRAEALNSTIEVLQQQRAAKQAEAADYRGRIPQYVNNQHLLDDQIQRMLPLVGVGSVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCC PNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKIEEKISTFRSEAREELARKQVQ CHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQALEGTLSGKQDILDRTLIRSPVNGIVKTLYITTIGGVASPGKSVIDIVPTNDSLLIEA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEE RIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELISPDSQADERSGSLYYKVQVRTH ECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEC SSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRPIVRGMSRAMSER CCCHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1427098; 10984043 [H]