| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is purC [H]
Identifier: 126455088
GI number: 126455088
Start: 823001
End: 823891
Strand: Direct
Name: purC [H]
Synonym: BURPS1106A_0842
Alternate gene names: 126455088
Gene position: 823001-823891 (Clockwise)
Preceding gene: 126451721
Following gene: 126454425
Centisome position: 20.63
GC content: 66.44
Gene sequence:
>891_bases ATGTCTACCCTTTACGAATCCACGCTGCGCTCGCTGCCGCTCCTCGGTCGCGGCAAGGTCCGCGACAACTACGCGCTCGG CAACGACAAGCTCCTGATCGTCACGACCGATCGCCTGTCGGCGTTCGACGTCATCATGGGCGAGCCGATTCCGAACAAGG GCCGCGTGCTGAACCAGATGGCGAACTTCTGGTTCGACAGGCTCGCGCACATCGTCCCGAACCATCTGACGGGCGTCGCG CCCGAGACGGTCGTCGCCGCCGACGAGGTCGAGCAGGTGAAGGGGCGCGCGGTCGTCGTCAAGCGGCTCGAGCCGATCCT CGTCGAGGCGGTCGTGCGCGGCTATCTGGCGGGCAGCGGCTGGAAGGACTACCAGGCGACGGGCAAGGTGTGCGGCGTCG AGCTGCCGGCCGGCCTGTCGAACGCGCAGAAGCTCCCCGAGCCGATCTTCACGCCCGCCGCGAAGGCCGAGATGGGCCAT CACGACGAGAACATCTCGTTCGAGGAAACCGAGCGGCGCATCGGCACCGAGCTCGCCGCGACGATTCGCGACATCTCGAT CAGGCTGTACAAGGAAGCGGCCGATTACGCGGCGACGCGCGGCATCATCATCGCCGACACGAAGTTCGAGTTCGGCCTCG ACGAGCACGGCGAGCTGTTCCTGATGGACGAGGCGTTGACGGCCGATTCGTCGCGCTTCTGGCCGGCGGACGAATACCGG GTCGGCACGAACCCGCCGTCGTTCGACAAGCAGTTCGTCCGCGACTGGCTCGAGGCGCAGAACTGGAACAAGGCGCCGCC CGCGCCGAAGCTGCCCGACGATGTGGTCGCGAAGACGAGCGCGAAGTATCAGGAAGCGCTCGAGCGCATCACGGGCAAGA CGCTCGACTGA
Upstream 100 bases:
>100_bases CGCCCGGCCGGTTCGCCGAAGTATTGCAAGGCCGCCGTTCCCGCCAGCCGCGGGGAACGGCGTTTCCCTTTTTGTTTGGC TCCTTATCTGCGAAAAGACG
Downstream 100 bases:
>100_bases CCATCGTCCGATTCACCGAAACGAGGAAGCGCACGATGAGCGAAGTCCAGACCGCCCATACGCACAGCGCGCCGCTCGTC GGCGTGCTGATGGGTTCCAG
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSTLYESTLRSLPLLGRGKVRDNYALGNDKLLIVTTDRLSAFDVIMGEPIPNKGRVLNQMANFWFDRLAHIVPNHLTGVA PETVVAADEVEQVKGRAVVVKRLEPILVEAVVRGYLAGSGWKDYQATGKVCGVELPAGLSNAQKLPEPIFTPAAKAEMGH HDENISFEETERRIGTELAATIRDISIRLYKEAADYAATRGIIIADTKFEFGLDEHGELFLMDEALTADSSRFWPADEYR VGTNPPSFDKQFVRDWLEAQNWNKAPPAPKLPDDVVAKTSAKYQEALERITGKTLD
Sequences:
>Translated_296_residues MSTLYESTLRSLPLLGRGKVRDNYALGNDKLLIVTTDRLSAFDVIMGEPIPNKGRVLNQMANFWFDRLAHIVPNHLTGVA PETVVAADEVEQVKGRAVVVKRLEPILVEAVVRGYLAGSGWKDYQATGKVCGVELPAGLSNAQKLPEPIFTPAAKAEMGH HDENISFEETERRIGTELAATIRDISIRLYKEAADYAATRGIIIADTKFEFGLDEHGELFLMDEALTADSSRFWPADEYR VGTNPPSFDKQFVRDWLEAQNWNKAPPAPKLPDDVVAKTSAKYQEALERITGKTLD >Mature_295_residues STLYESTLRSLPLLGRGKVRDNYALGNDKLLIVTTDRLSAFDVIMGEPIPNKGRVLNQMANFWFDRLAHIVPNHLTGVAP ETVVAADEVEQVKGRAVVVKRLEPILVEAVVRGYLAGSGWKDYQATGKVCGVELPAGLSNAQKLPEPIFTPAAKAEMGHH DENISFEETERRIGTELAATIRDISIRLYKEAADYAATRGIIIADTKFEFGLDEHGELFLMDEALTADSSRFWPADEYRV GTNPPSFDKQFVRDWLEAQNWNKAPPAPKLPDDVVAKTSAKYQEALERITGKTLD
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=291, Percent_Identity=46.7353951890034, Blast_Score=270, Evalue=3e-73,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 32840; Mature: 32708
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS01057 SAICAR_SYNTHETASE_1 ; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLYESTLRSLPLLGRGKVRDNYALGNDKLLIVTTDRLSAFDVIMGEPIPNKGRVLNQM CCHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHH ANFWFDRLAHIVPNHLTGVAPETVVAADEVEQVKGRAVVVKRLEPILVEAVVRGYLAGSG HHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC WKDYQATGKVCGVELPAGLSNAQKLPEPIFTPAAKAEMGHHDENISFEETERRIGTELAA CCCHHCCCCEEEEECCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH TIRDISIRLYKEAADYAATRGIIIADTKFEFGLDEHGELFLMDEALTADSSRFWPADEYR HHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCCCCCEEEEECHHCCCCCCCCCCCCCC VGTNPPSFDKQFVRDWLEAQNWNKAPPAPKLPDDVVAKTSAKYQEALERITGKTLD CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STLYESTLRSLPLLGRGKVRDNYALGNDKLLIVTTDRLSAFDVIMGEPIPNKGRVLNQM CHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHH ANFWFDRLAHIVPNHLTGVAPETVVAADEVEQVKGRAVVVKRLEPILVEAVVRGYLAGSG HHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC WKDYQATGKVCGVELPAGLSNAQKLPEPIFTPAAKAEMGHHDENISFEETERRIGTELAA CCCHHCCCCEEEEECCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH TIRDISIRLYKEAADYAATRGIIIADTKFEFGLDEHGELFLMDEALTADSSRFWPADEYR HHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCCCCCEEEEECHHCCCCCCCCCCCCCC VGTNPPSFDKQFVRDWLEAQNWNKAPPAPKLPDDVVAKTSAKYQEALERITGKTLD CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA