| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455068
Identifier: 126455068
GI number: 126455068
Start: 1348599
End: 1349054
Strand: Direct
Name: 126455068
Synonym: BURPS1106A_1375
Alternate gene names: NA
Gene position: 1348599-1349054 (Clockwise)
Preceding gene: 126454086
Following gene: 126452517
Centisome position: 33.81
GC content: 76.97
Gene sequence:
>456_bases ATGACGACCGAGATCGCCCACGCAACCGCCCACCTCCGCCGCGCCGGCCGCCGCCCGTTGCGCGCCGTCGCGCTCGCGGC CATCGCCGCCGCCGCGCTCGCCGGATGCAAGAAGCCTGAAGAGGCGAGCGCGCCGCCCGACAATGCGGCGAGCGCCGCTG CGCACGCGGCCCGGCAGACGACTCAGAAGCTCGATCAGGTCGCGAGCTTCGTCAATCAGCAGATCGAGGCGGCGAAGCAG GGCGTCGCATCGGCCGCGTCCGCGGTGCCGCCCGTCACCGCGAGCTCGGTGTCGGCCGCCGCGCAGGGCGCCGCGTCGGC CGTTCTCGGGCAGGCGGCCACCGCGGCCGGCACGAGCCTCGAGGCGGCGGGCCGCAAGCTGCAGCAATGGAGCCAGACGG CCGCGCTCGGCACGTCGGGCGCGGCCGCCGCGAGCGGCGCCGCGGCAAGCCAGTGA
Upstream 100 bases:
>100_bases CAACGACATGTAAAAAAGAAACGGCGGCCGCCGAGTGTGCGCCGGCGCGTCGTATCATCGCGTTTTCGCCACACGGAGCC GCTTTGCCGCGCCATTCGCC
Downstream 100 bases:
>100_bases ATCCGCTTGCATTCCCGGCTAAATGTAATTATGATGGTTACACATTGTCGTCGAGACGGCGTACGAATGCATGCCGCCGC AGGTGAATCATGAATACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTTEIAHATAHLRRAGRRPLRAVALAAIAAAALAGCKKPEEASAPPDNAASAAAHAARQTTQKLDQVASFVNQQIEAAKQ GVASAASAVPPVTASSVSAAAQGAASAVLGQAATAAGTSLEAAGRKLQQWSQTAALGTSGAAAASGAAASQ
Sequences:
>Translated_151_residues MTTEIAHATAHLRRAGRRPLRAVALAAIAAAALAGCKKPEEASAPPDNAASAAAHAARQTTQKLDQVASFVNQQIEAAKQ GVASAASAVPPVTASSVSAAAQGAASAVLGQAATAAGTSLEAAGRKLQQWSQTAALGTSGAAAASGAAASQ >Mature_150_residues TTEIAHATAHLRRAGRRPLRAVALAAIAAAALAGCKKPEEASAPPDNAASAAAHAARQTTQKLDQVASFVNQQIEAAKQG VASAASAVPPVTASSVSAAAQGAASAVLGQAATAAGTSLEAAGRKLQQWSQTAALGTSGAAAASGAAASQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14532; Mature: 14401
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEIAHATAHLRRAGRRPLRAVALAAIAAAALAGCKKPEEASAPPDNAASAAAHAARQT CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH TQKLDQVASFVNQQIEAAKQGVASAASAVPPVTASSVSAAAQGAASAVLGQAATAAGTSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH EAAGRKLQQWSQTAALGTSGAAAASGAAASQ HHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC >Mature Secondary Structure TTEIAHATAHLRRAGRRPLRAVALAAIAAAALAGCKKPEEASAPPDNAASAAAHAARQT CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH TQKLDQVASFVNQQIEAAKQGVASAASAVPPVTASSVSAAAQGAASAVLGQAATAAGTSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH EAAGRKLQQWSQTAALGTSGAAAASGAAASQ HHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA