| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455014
Identifier: 126455014
GI number: 126455014
Start: 2132750
End: 2133154
Strand: Reverse
Name: 126455014
Synonym: BURPS1106A_2148
Alternate gene names: NA
Gene position: 2133154-2132750 (Counterclockwise)
Preceding gene: 126452083
Following gene: 126451931
Centisome position: 53.48
GC content: 69.14
Gene sequence:
>405_bases GTGCCGGCCCGCGCGCGCCGCACGCTGAACCGTGTTCCGACGATGGACGATTATCAATACGATTGCGCGAGCGCCGAATT CGGCGAACTCGCGCGCGTGATCTGCGATCTCTTTCCCGAGCAGACGCGCTTTGCCGAGCGTGCCGACGAAGCGGGGCGCT TGCTGTCCGTGCATTGGCTCGCGATGCGTTTCGGCGCGACACCGCGCAAGACGACGCTCGACGTGCGCTTCACGAGTGCC GCGCTGCGGCGCTATCTCGCGCTCAAGCCGATGCAGCGCGCGCGCAGCCACGCGGTGCTGCGCGCGTACGTGGAAGCGAC GCTCGGCTCGCTCGAGGAGCGGCACGCGGCGGGCGAGACGGTGCCGCGCGAGACGACGCTCGAGCTCGGCGACGAATTTG CGTGA
Upstream 100 bases:
>100_bases TGCCGTCGCTCGTGTACAACGGCGGCGGCGTGCCGTTCGAATGGATGGTCGCGCTGTATCTGCTGCTCACCGCGGGCTTC GCCGGCGCGCTGATGAAACT
Downstream 100 bases:
>100_bases CGAGCCGAGCGTTCGCGTGACGGCGGGCCCTGTACGGATGGGGCGCGCCATTGGCTCGGCGCCGATCATGCTGCAAAAAA GCCCGCCGTTCGACAGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPARARRTLNRVPTMDDYQYDCASAEFGELARVICDLFPEQTRFAERADEAGRLLSVHWLAMRFGATPRKTTLDVRFTSA ALRRYLALKPMQRARSHAVLRAYVEATLGSLEERHAAGETVPRETTLELGDEFA
Sequences:
>Translated_134_residues MPARARRTLNRVPTMDDYQYDCASAEFGELARVICDLFPEQTRFAERADEAGRLLSVHWLAMRFGATPRKTTLDVRFTSA ALRRYLALKPMQRARSHAVLRAYVEATLGSLEERHAAGETVPRETTLELGDEFA >Mature_133_residues PARARRTLNRVPTMDDYQYDCASAEFGELARVICDLFPEQTRFAERADEAGRLLSVHWLAMRFGATPRKTTLDVRFTSAA LRRYLALKPMQRARSHAVLRAYVEATLGSLEERHAAGETVPRETTLELGDEFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15202; Mature: 15071
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARARRTLNRVPTMDDYQYDCASAEFGELARVICDLFPEQTRFAERADEAGRLLSVHWL CCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHH AMRFGATPRKTTLDVRFTSAALRRYLALKPMQRARSHAVLRAYVEATLGSLEERHAAGET HHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPRETTLELGDEFA CCCHHHHHCCCCCC >Mature Secondary Structure PARARRTLNRVPTMDDYQYDCASAEFGELARVICDLFPEQTRFAERADEAGRLLSVHWL CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHH AMRFGATPRKTTLDVRFTSAALRRYLALKPMQRARSHAVLRAYVEATLGSLEERHAAGET HHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPRETTLELGDEFA CCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA