| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is acpA
Identifier: 126455011
GI number: 126455011
Start: 3870785
End: 3872446
Strand: Reverse
Name: acpA
Synonym: BURPS1106A_3966
Alternate gene names: NA
Gene position: 3872446-3870785 (Counterclockwise)
Preceding gene: 126454091
Following gene: 126455194
Centisome position: 97.09
GC content: 69.13
Gene sequence:
>1662_bases GTGACTGACAAGCATCCCCCGTCGACCGACCTTCCCGAGGACCCCGATCGCCGCCGCGTGCTCGGCGGCATCGCGGCGCT CGGCGCGAGCGTCGCGCTCGCCGGCTGCGAGACGGCCGTGCCCGCCGCGCCGCGCTCGGCCGCAGAACTGCGGCTCGACG CCGCGCTGCGCCGCGAAGTGCGCAACATCGTCGTGATCTACGCGGAGAATCGCAGCTTCGCGAACCTGTTCGGCGATTTC CCCGGCGTGCAGCAGCCGCTCGGCGCGGTATCGCCCGAGCGCTACGCGCAGCTCGACCGCGACGGCAAGACGCCGCTCGC GACGCTGCCGAAAATCTGGGGCGGCCTCGTGCCGCAGGCGCAAGTCGTCGACGGCAAGCGCTACATGATCGGCGAGCACG ACATTGTCGGGCTGCCGAACGCGCCGTTCGTGATTCCCGATGCGCAGGGCAAGCCGCTGCCGAACGGCGTGATCACGCGC GACTTGTGGCATCGCTTCTATCAGAACCAGATGCAGATCAACGGCGGCCGCAACGACCAGTTCGCCGCCTGGGCCGATTC GGGCGGCCTCGTGATGGGGCATTACCGCAATTCGGCCGAGACGCTGCGGCTGTGGAATCTCGCGCGCGGGTACACGCTCT GCGACAACTTCTTCATGGCCGCGTTCGGCGGCTCGTGGCTGAACCACATCTTCCTCATTTCCGCACAGGCGCCGCTTTAT CCGGACGTGCACCAGAGCCCGGCGAAGCATCTCGTATCCGTCGTCGAAGGCGACGATCCGGCCGGCACGCGGCTGAAGCT GGCCGCGGATTCGCCCGCATCGGCGCTCGACGGCCCGCCGAAATTCGAGAACGATGGCCTCTTCACGCCGGACGGCTACG CGGTGAACACGATGGCGCCGCCGTATCAGCCGAGCAGCGTGCGCCCGCCCGTCGAAGGCAATCCGGCGTACGCGGACCCG TCGAACCCGCGCGTGCTGCCGCCGCAGCATTACGCGACGATCGGCGATCGCCTGTCGGAGAAGGGCGTCGACTGGGCGTG GTACGGCGGTGCGTGGCAATACGCGCTCGAGCATCGGGACACGGGCTCGGTGCCGGACTTCCAGTATCACCATCAGCCGT TCAATTACTTCGCGAGCTACGCGCCGGGCACCGAGGCGCGGCGCCGGCACCTGCGCGACGCGGGCCTCGGCGACGATCCG TCGACGAACCATCTGATCGCCGACATCGACGCGGGCCGCTTGCCGACCGTCACGTTCTACAAGCCGCAGGGCAACCTGAA CATGCACGCGGGTTATGCGGATGTCGCGTCGGGCGACCGGCACATCGCGACGGTGATCGAGCACATCATGCGCGGCCCGC AGTGGGCGCACACGGTCGTGATCCTGACGGTCGACGAGAACGGCGGCTGGTGGGACCCGGTGTCGCCGCCGAAGGGCGAC CGGTGGGGGCCGGGTTCGCGGATTCCGGCGATGGTGATCTCGCCGTTCGCGAAGAAGGGCTACGTCGATCACACGCTGTA CGACACGAACTCGATCCTGCGTTTCATCTCGCGCGTGCACGGGCTCGCGCCGCTCGACGGCGTGCTCGCGCGTGAGCGCG CGTTCGCGGCGCGCGGCGCGCAGCCGCCGGGCGATCTCACCGAAGCGCTCGACCTCGGCTGA
Upstream 100 bases:
>100_bases TCGCGGCCGCCGCCAGGCGAAGCCGGCGATGCGCGCGTCACCGGTTCGGGCGCCGACGCGCGGCGGACCGTCCAACCAAC CAGAAGATCGAGGAGCAGAA
Downstream 100 bases:
>100_bases GGCTCGGCGGGAAACCGGCTGCGGCCAGCCGGTTTCGTCGCCGCACGTGCCGGCGCGTCGGCAACGACGGCGCTGGCCGC ATCGCGCATGAGCGCCGCTC
Product: acid phosphatase AcpA
Products: NA
Alternate protein names: Acid Phosphatase; Phospholipase C; Phospholipase C Phosphocholine-Specific; Acid Phosphatase AcpA; Phospholipase C Protein; Acid Phosphatase Protein; Phosphoesterase Family Protein; Phospholipase; Twin-Arginine Translocation Pathway Signal; Phosphesterase; Non-Hemolytic Phospholipase C; Phosphoesterase Familiy Protein; Membrane Associated Phosphoesterase
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTDKHPPSTDLPEDPDRRRVLGGIAALGASVALAGCETAVPAAPRSAAELRLDAALRREVRNIVVIYAENRSFANLFGDF PGVQQPLGAVSPERYAQLDRDGKTPLATLPKIWGGLVPQAQVVDGKRYMIGEHDIVGLPNAPFVIPDAQGKPLPNGVITR DLWHRFYQNQMQINGGRNDQFAAWADSGGLVMGHYRNSAETLRLWNLARGYTLCDNFFMAAFGGSWLNHIFLISAQAPLY PDVHQSPAKHLVSVVEGDDPAGTRLKLAADSPASALDGPPKFENDGLFTPDGYAVNTMAPPYQPSSVRPPVEGNPAYADP SNPRVLPPQHYATIGDRLSEKGVDWAWYGGAWQYALEHRDTGSVPDFQYHHQPFNYFASYAPGTEARRRHLRDAGLGDDP STNHLIADIDAGRLPTVTFYKPQGNLNMHAGYADVASGDRHIATVIEHIMRGPQWAHTVVILTVDENGGWWDPVSPPKGD RWGPGSRIPAMVISPFAKKGYVDHTLYDTNSILRFISRVHGLAPLDGVLARERAFAARGAQPPGDLTEALDLG
Sequences:
>Translated_553_residues MTDKHPPSTDLPEDPDRRRVLGGIAALGASVALAGCETAVPAAPRSAAELRLDAALRREVRNIVVIYAENRSFANLFGDF PGVQQPLGAVSPERYAQLDRDGKTPLATLPKIWGGLVPQAQVVDGKRYMIGEHDIVGLPNAPFVIPDAQGKPLPNGVITR DLWHRFYQNQMQINGGRNDQFAAWADSGGLVMGHYRNSAETLRLWNLARGYTLCDNFFMAAFGGSWLNHIFLISAQAPLY PDVHQSPAKHLVSVVEGDDPAGTRLKLAADSPASALDGPPKFENDGLFTPDGYAVNTMAPPYQPSSVRPPVEGNPAYADP SNPRVLPPQHYATIGDRLSEKGVDWAWYGGAWQYALEHRDTGSVPDFQYHHQPFNYFASYAPGTEARRRHLRDAGLGDDP STNHLIADIDAGRLPTVTFYKPQGNLNMHAGYADVASGDRHIATVIEHIMRGPQWAHTVVILTVDENGGWWDPVSPPKGD RWGPGSRIPAMVISPFAKKGYVDHTLYDTNSILRFISRVHGLAPLDGVLARERAFAARGAQPPGDLTEALDLG >Mature_552_residues TDKHPPSTDLPEDPDRRRVLGGIAALGASVALAGCETAVPAAPRSAAELRLDAALRREVRNIVVIYAENRSFANLFGDFP GVQQPLGAVSPERYAQLDRDGKTPLATLPKIWGGLVPQAQVVDGKRYMIGEHDIVGLPNAPFVIPDAQGKPLPNGVITRD LWHRFYQNQMQINGGRNDQFAAWADSGGLVMGHYRNSAETLRLWNLARGYTLCDNFFMAAFGGSWLNHIFLISAQAPLYP DVHQSPAKHLVSVVEGDDPAGTRLKLAADSPASALDGPPKFENDGLFTPDGYAVNTMAPPYQPSSVRPPVEGNPAYADPS NPRVLPPQHYATIGDRLSEKGVDWAWYGGAWQYALEHRDTGSVPDFQYHHQPFNYFASYAPGTEARRRHLRDAGLGDDPS TNHLIADIDAGRLPTVTFYKPQGNLNMHAGYADVASGDRHIATVIEHIMRGPQWAHTVVILTVDENGGWWDPVSPPKGDR WGPGSRIPAMVISPFAKKGYVDHTLYDTNSILRFISRVHGLAPLDGVLARERAFAARGAQPPGDLTEALDLG
Specific function: Unknown
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60289; Mature: 60158
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKHPPSTDLPEDPDRRRVLGGIAALGASVALAGCETAVPAAPRSAAELRLDAALRREV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC RNIVVIYAENRSFANLFGDFPGVQQPLGAVSPERYAQLDRDGKTPLATLPKIWGGLVPQA CEEEEEEECCCCHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCE QVVDGKRYMIGEHDIVGLPNAPFVIPDAQGKPLPNGVITRDLWHRFYQNQMQINGGRNDQ EEECCCEEEECCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCC FAAWADSGGLVMGHYRNSAETLRLWNLARGYTLCDNFFMAAFGGSWLNHIFLISAQAPLY EEEEECCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHCEEEEEECCCCCC PDVHQSPAKHLVSVVEGDDPAGTRLKLAADSPASALDGPPKFENDGLFTPDGYAVNTMAP CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEECCCCC PYQPSSVRPPVEGNPAYADPSNPRVLPPQHYATIGDRLSEKGVDWAWYGGAWQYALEHRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEEEEEEECCC TGSVPDFQYHHQPFNYFASYAPGTEARRRHLRDAGLGDDPSTNHLIADIDAGRLPTVTFY CCCCCCCHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEE KPQGNLNMHAGYADVASGDRHIATVIEHIMRGPQWAHTVVILTVDENGGWWDPVSPPKGD CCCCCCEEECCCHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCC RWGPGSRIPAMVISPFAKKGYVDHTLYDTNSILRFISRVHGLAPLDGVLARERAFAARGA CCCCCCCCCHHHHCHHHHCCCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC QPPGDLTEALDLG CCCCHHHHHHCCC >Mature Secondary Structure TDKHPPSTDLPEDPDRRRVLGGIAALGASVALAGCETAVPAAPRSAAELRLDAALRREV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC RNIVVIYAENRSFANLFGDFPGVQQPLGAVSPERYAQLDRDGKTPLATLPKIWGGLVPQA CEEEEEEECCCCHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCE QVVDGKRYMIGEHDIVGLPNAPFVIPDAQGKPLPNGVITRDLWHRFYQNQMQINGGRNDQ EEECCCEEEECCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCC FAAWADSGGLVMGHYRNSAETLRLWNLARGYTLCDNFFMAAFGGSWLNHIFLISAQAPLY EEEEECCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHCEEEEEECCCCCC PDVHQSPAKHLVSVVEGDDPAGTRLKLAADSPASALDGPPKFENDGLFTPDGYAVNTMAP CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEECCCCC PYQPSSVRPPVEGNPAYADPSNPRVLPPQHYATIGDRLSEKGVDWAWYGGAWQYALEHRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEEEEEEECCC TGSVPDFQYHHQPFNYFASYAPGTEARRRHLRDAGLGDDPSTNHLIADIDAGRLPTVTFY CCCCCCCHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEE KPQGNLNMHAGYADVASGDRHIATVIEHIMRGPQWAHTVVILTVDENGGWWDPVSPPKGD CCCCCCEEECCCHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCC RWGPGSRIPAMVISPFAKKGYVDHTLYDTNSILRFISRVHGLAPLDGVLARERAFAARGA CCCCCCCCCHHHHCHHHHCCCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC QPPGDLTEALDLG CCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA