Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126454972

Identifier: 126454972

GI number: 126454972

Start: 2460175

End: 2461122

Strand: Reverse

Name: 126454972

Synonym: BURPS1106A_2503

Alternate gene names: NA

Gene position: 2461122-2460175 (Counterclockwise)

Preceding gene: 126453862

Following gene: 126451882

Centisome position: 61.71

GC content: 72.05

Gene sequence:

>948_bases
TTGCAAGAGAATGAACGACGCAGCGCCGGCTGGCCGACGCTCGCGATTCTGGTTGGCGCATCGGTATGGGGCCTGATCTG
GTATCCGCTGCGCCTGCTGGCGGCGCTCGGCGTGACGGGCACGGTGGCGAGCGCGGCGACGAGCATCGTCGCGTGCGCGT
TCGTGCTGATCGTGCGGCGCAAGTCGATCGCGACCGTGCGCCGGCATTGGCTGCTGCCCGCGCTGGGCGTTGCCGCGGGC
GTGACGAACCTCGGCTTCGTGTGGGGCACGATCCACGGCGAGGTGCTGCGCGTGATGCTGCTTTTCTATCTGACGCCCGC
GTGGACCGCGATCTACGCGCACTTCATCCTGCGCGAGCGGCTGACGGCGGCGGGCGCGGCGTTCGCCGCGCTGTCGCTCG
GCGGCGCGGTGCTGATGCTGTGGTCGCCCCGGCTCGGCGTGCCGCTGCCGTCGAACCCGGCCGAATGGGCGGGGCTCGCG
GCCGGAATGAGCTTCGCGATGAGCAACGTGCTCGTCGTCAAGGCGAGCCGCGAGCTGCCGCGGATGAAGCCCGAGATGCG
CACGGCGACGCTGTTCGCCGGCGCGGCCGCGATGGGCGTCGCCGCCGCGTTCGTCGAGGGCCTGCCGCCGCTGCCGGCGG
GCGGTGAGCTCGGCCGCGCGGCGCTGCTCGTCGTCGGGATCGGCGTGACGGTCGCGGCGAACAACATGCTCGTCCAGCAC
GGCCTCGCGCGCGTGCCGGCGAACCGCGCGTCGATCATCATGCTGTTCGAGATCGTCGTCACGGCGCTCACCGCGTGGCT
TTTTGCCAACGAAGTGCCGAGCGCGCGCGAATGGGCGGGCGGCCTGTGCATCGTCGTCGCGACCCTGCTGTCGAGCCGCG
TGCATCGCGCCCGCCCGGCCGAAGACGAACCGCTCGAGCCGCGGGACGACGCGCGCGCGATGGTATGA

Upstream 100 bases:

>100_bases
GGGCGCGGCGACGGCGCTCGATTATAGCGTGACATCGGGTGGCTCGACGCGCGGCGCGCGTGCCGCGGCGCCGTCCGGGG
AAGGAAAGACGAGGTTCGGT

Downstream 100 bases:

>100_bases
TTGGCCCCATTCGCGGGGCCGACTGCTTGACAGCACGGCCCCGTTTTTCGAATCTTGGGCGTGCGGCGCGCGCGCGGGCC
TTCCGGCCGAATCGCGGCGC

Product: integral membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAG
VTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRERLTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLA
AGMSFAMSNVLVVKASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH
GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPLEPRDDARAMV

Sequences:

>Translated_315_residues
MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAG
VTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRERLTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLA
AGMSFAMSNVLVVKASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH
GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPLEPRDDARAMV
>Mature_315_residues
MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAG
VTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRERLTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLA
AGMSFAMSNVLVVKASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH
GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPLEPRDDARAMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33293; Mature: 33293

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELP
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHCC
RMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCHHHHHCHHHHHH
GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC
EDEPLEPRDDARAMV
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELP
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHCC
RMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCHHHHHCHHHHHH
GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC
EDEPLEPRDDARAMV
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA