| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454972
Identifier: 126454972
GI number: 126454972
Start: 2460175
End: 2461122
Strand: Reverse
Name: 126454972
Synonym: BURPS1106A_2503
Alternate gene names: NA
Gene position: 2461122-2460175 (Counterclockwise)
Preceding gene: 126453862
Following gene: 126451882
Centisome position: 61.71
GC content: 72.05
Gene sequence:
>948_bases TTGCAAGAGAATGAACGACGCAGCGCCGGCTGGCCGACGCTCGCGATTCTGGTTGGCGCATCGGTATGGGGCCTGATCTG GTATCCGCTGCGCCTGCTGGCGGCGCTCGGCGTGACGGGCACGGTGGCGAGCGCGGCGACGAGCATCGTCGCGTGCGCGT TCGTGCTGATCGTGCGGCGCAAGTCGATCGCGACCGTGCGCCGGCATTGGCTGCTGCCCGCGCTGGGCGTTGCCGCGGGC GTGACGAACCTCGGCTTCGTGTGGGGCACGATCCACGGCGAGGTGCTGCGCGTGATGCTGCTTTTCTATCTGACGCCCGC GTGGACCGCGATCTACGCGCACTTCATCCTGCGCGAGCGGCTGACGGCGGCGGGCGCGGCGTTCGCCGCGCTGTCGCTCG GCGGCGCGGTGCTGATGCTGTGGTCGCCCCGGCTCGGCGTGCCGCTGCCGTCGAACCCGGCCGAATGGGCGGGGCTCGCG GCCGGAATGAGCTTCGCGATGAGCAACGTGCTCGTCGTCAAGGCGAGCCGCGAGCTGCCGCGGATGAAGCCCGAGATGCG CACGGCGACGCTGTTCGCCGGCGCGGCCGCGATGGGCGTCGCCGCCGCGTTCGTCGAGGGCCTGCCGCCGCTGCCGGCGG GCGGTGAGCTCGGCCGCGCGGCGCTGCTCGTCGTCGGGATCGGCGTGACGGTCGCGGCGAACAACATGCTCGTCCAGCAC GGCCTCGCGCGCGTGCCGGCGAACCGCGCGTCGATCATCATGCTGTTCGAGATCGTCGTCACGGCGCTCACCGCGTGGCT TTTTGCCAACGAAGTGCCGAGCGCGCGCGAATGGGCGGGCGGCCTGTGCATCGTCGTCGCGACCCTGCTGTCGAGCCGCG TGCATCGCGCCCGCCCGGCCGAAGACGAACCGCTCGAGCCGCGGGACGACGCGCGCGCGATGGTATGA
Upstream 100 bases:
>100_bases GGGCGCGGCGACGGCGCTCGATTATAGCGTGACATCGGGTGGCTCGACGCGCGGCGCGCGTGCCGCGGCGCCGTCCGGGG AAGGAAAGACGAGGTTCGGT
Downstream 100 bases:
>100_bases TTGGCCCCATTCGCGGGGCCGACTGCTTGACAGCACGGCCCCGTTTTTCGAATCTTGGGCGTGCGGCGCGCGCGCGGGCC TTCCGGCCGAATCGCGGCGC
Product: integral membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAG VTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRERLTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLA AGMSFAMSNVLVVKASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPLEPRDDARAMV
Sequences:
>Translated_315_residues MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAG VTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRERLTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLA AGMSFAMSNVLVVKASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPLEPRDDARAMV >Mature_315_residues MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAG VTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRERLTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLA AGMSFAMSNVLVVKASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPLEPRDDARAMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33293; Mature: 33293
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELP HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHCC RMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCHHHHHCHHHHHH GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC EDEPLEPRDDARAMV CCCCCCCCCCCCCCC >Mature Secondary Structure MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELP HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHCC RMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCHHHHHCHHHHHH GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC EDEPLEPRDDARAMV CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA