| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is cysC [H]
Identifier: 126454924
GI number: 126454924
Start: 2698841
End: 2699461
Strand: Reverse
Name: cysC [H]
Synonym: BURPS1106A_2733
Alternate gene names: 126454924
Gene position: 2699461-2698841 (Counterclockwise)
Preceding gene: 126453768
Following gene: 126453048
Centisome position: 67.68
GC content: 69.08
Gene sequence:
>621_bases ATGAACATGAAGGGCGGTTTTCCGCCGGAGGCGGTCGCTCCGGTCATATGGATGACGGGGTTGCCGGGGGCCGGCAAGAC GACGACGGCGAACGCATTGGCGGAACGGCTGCTCGAGGACGGCGCGAAGGCGATCGTGCTCGACGGCGATGCGCTGCGCA GCGGCCTTTGCGCCGATCTCGGCTTTTCCGACGCGGACCGGATGGAAAACATTCGCCGCTTCGCGCACGTCGCCAAGCTG TTTCAGCGCGAAGGCTATGTCGTGATCGTCGCGACGATCTCGCCGCTGCAGGCGCATCGCGATCTCGCGCGCTCGATCGT CGGCGAAGGCTTTTTCGAGACCTACGTGGCGACGCCGTTCGACGTGTGCCGCTCGCGGGACCCGAAGGGGATGTACGCGC GCGCCGAACAGGGGCGGCTGATGCAGTTCACGGGCGTGTCGGGAGTGTACGAGCCGCCCGTCGCGCCGGATATCTCGATC GACACGACGGAGCGCAGCGTGGCGTTTTCGCTTGCCGAAGTCATGGCGCAGCTCGCGCGGGTGAGCGCGCTGCCCGCGCC GCTCGACGCGGCGGCGTCCGCACCGGTTGCCGCATCCGCCCCCGCCGCCGCGGGCGGCTGA
Upstream 100 bases:
>100_bases ATGGATATCGCTGAAATATTCAGAAAAGGTCAGATTTTTGATCTTTTTCAGTTGTTAAACTCTCGCTTTGTGCCGGAGAG GGTTTGACAGAGGCTAGCGC
Downstream 100 bases:
>100_bases TGGGCGTTCGATTCGCGCGTGCCGCGCGGGCGCGCTCGCGGATCGCGCGCGCCCTTTCGGCGCAGGCCGCCGCGCCCGCG GCGCTGTTCGCCCCCGCCCG
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MNMKGGFPPEAVAPVIWMTGLPGAGKTTTANALAERLLEDGAKAIVLDGDALRSGLCADLGFSDADRMENIRRFAHVAKL FQREGYVVIVATISPLQAHRDLARSIVGEGFFETYVATPFDVCRSRDPKGMYARAEQGRLMQFTGVSGVYEPPVAPDISI DTTERSVAFSLAEVMAQLARVSALPAPLDAAASAPVAASAPAAAGG
Sequences:
>Translated_206_residues MNMKGGFPPEAVAPVIWMTGLPGAGKTTTANALAERLLEDGAKAIVLDGDALRSGLCADLGFSDADRMENIRRFAHVAKL FQREGYVVIVATISPLQAHRDLARSIVGEGFFETYVATPFDVCRSRDPKGMYARAEQGRLMQFTGVSGVYEPPVAPDISI DTTERSVAFSLAEVMAQLARVSALPAPLDAAASAPVAASAPAAAGG >Mature_206_residues MNMKGGFPPEAVAPVIWMTGLPGAGKTTTANALAERLLEDGAKAIVLDGDALRSGLCADLGFSDADRMENIRRFAHVAKL FQREGYVVIVATISPLQAHRDLARSIVGEGFFETYVATPFDVCRSRDPKGMYARAEQGRLMQFTGVSGVYEPPVAPDISI DTTERSVAFSLAEVMAQLARVSALPAPLDAAASAPVAASAPAAAGG
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI34447231, Length=185, Percent_Identity=42.7027027027027, Blast_Score=141, Evalue=3e-34, Organism=Homo sapiens, GI62912492, Length=185, Percent_Identity=42.7027027027027, Blast_Score=140, Evalue=6e-34, Organism=Homo sapiens, GI46094058, Length=186, Percent_Identity=43.010752688172, Blast_Score=139, Evalue=1e-33, Organism=Escherichia coli, GI1789107, Length=148, Percent_Identity=52.027027027027, Blast_Score=159, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17542422, Length=177, Percent_Identity=43.5028248587571, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6322852, Length=156, Percent_Identity=44.8717948717949, Blast_Score=142, Evalue=4e-35, Organism=Drosophila melanogaster, GI24667040, Length=177, Percent_Identity=42.3728813559322, Blast_Score=143, Evalue=8e-35, Organism=Drosophila melanogaster, GI116007838, Length=177, Percent_Identity=42.3728813559322, Blast_Score=143, Evalue=8e-35, Organism=Drosophila melanogaster, GI24667044, Length=177, Percent_Identity=42.3728813559322, Blast_Score=143, Evalue=8e-35, Organism=Drosophila melanogaster, GI24667032, Length=177, Percent_Identity=42.3728813559322, Blast_Score=143, Evalue=8e-35, Organism=Drosophila melanogaster, GI24667028, Length=177, Percent_Identity=42.3728813559322, Blast_Score=143, Evalue=8e-35, Organism=Drosophila melanogaster, GI24667036, Length=177, Percent_Identity=42.3728813559322, Blast_Score=143, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 21595; Mature: 21595
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMKGGFPPEAVAPVIWMTGLPGAGKTTTANALAERLLEDGAKAIVLDGDALRSGLCADL CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHCHHHHC GFSDADRMENIRRFAHVAKLFQREGYVVIVATISPLQAHRDLARSIVGEGFFETYVATPF CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHCCHH DVCRSRDPKGMYARAEQGRLMQFTGVSGVYEPPVAPDISIDTTERSVAFSLAEVMAQLAR HHHCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VSALPAPLDAAASAPVAASAPAAAGG HHCCCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNMKGGFPPEAVAPVIWMTGLPGAGKTTTANALAERLLEDGAKAIVLDGDALRSGLCADL CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHCHHHHC GFSDADRMENIRRFAHVAKLFQREGYVVIVATISPLQAHRDLARSIVGEGFFETYVATPF CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHCCHH DVCRSRDPKGMYARAEQGRLMQFTGVSGVYEPPVAPDISIDTTERSVAFSLAEVMAQLAR HHHCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VSALPAPLDAAASAPVAASAPAAAGG HHCCCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA