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The map label for this gene is rcsB [H]

Identifier: 126454876

GI number: 126454876

Start: 2073631

End: 2074296

Strand: Reverse

Name: rcsB [H]

Synonym: BURPS1106A_2078

Alternate gene names: 126454876

Gene position: 2074296-2073631 (Counterclockwise)

Preceding gene: 126453731

Following gene: 126454519

Centisome position: 52.01

GC content: 63.96

Gene sequence:

>666_bases
ATGTCCAACGTTGCCCTGCATACAAGAAAAGTCGTCGTGGCCGACGATCATCCGATCGTCCTGCGTGCGGTGACGGATTA
CGTCAATTCGCTGCCGGGTTTTCACGTCGTGGCGTCGGTTTCGTCGGGGGACGCGCTGTTGTCCGCGATGCGGGAGCAGG
AGGTCAATCTCGTCGTGACCGATTTCACGATGCATCAGGCGAACGACGACAAGGACGGCTTGCGCTTGATCTCGCACCTG
ATGAGGGCGTACGAGCGCACGCCGATCATCGTGTTCACGATGCTGACCAATAGCGGCGTGATCAGCCAGCTGTGCCGCAT
GGGCGTGGCGGGGCTCGTCGGCAAGGAGGAGGAGATCGCCGAGCTCGGGCGCGTATGCGTGAGCGTGGCGCGCGGCGTCA
GCCAATCGTTGTCGCCCGGCATGGCTCACCGGCTTGCCGCCGTCGGCAGCATCAGGCCGGGCGAGGCGGCATTCAACGCG
TTGACGCCGAAGGAACTGGAGGTCGTGCGGCTGTTTACGGGCGGCATGTCGCTCACGGACATCGCGCGCACGCTGAATCG
CTCGCTCGGGACCGTGTCGACGCAGAAGCGCTCGGCCATGCGCAAGCTGCACGTGGACACCAACGTCGATCTCATCAACT
GCGCCCGCGAGCAAGGACTGCTCTGA

Upstream 100 bases:

>100_bases
ACGCAGGCAATCGTTATCGTTTTGCATGGAACGCGCATGAGCGTGCGCCGGACCTCGTTCGTGCGGCACGGAGGCGCTTT
CCGCTTTTTTCGGAGCCGCC

Downstream 100 bases:

>100_bases
TGCAAGGACTTCTGCAAGAGCTCGACGGATCGCCGCTGAGGAAGTTCTATTCGCTCGAGTCGAATCTGAAGCGCGAGCGG
CGGGTCTTCACGATCGTCAT

Product: LuxR family DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSNVALHTRKVVVADDHPIVLRAVTDYVNSLPGFHVVASVSSGDALLSAMREQEVNLVVTDFTMHQANDDKDGLRLISHL
MRAYERTPIIVFTMLTNSGVISQLCRMGVAGLVGKEEEIAELGRVCVSVARGVSQSLSPGMAHRLAAVGSIRPGEAAFNA
LTPKELEVVRLFTGGMSLTDIARTLNRSLGTVSTQKRSAMRKLHVDTNVDLINCAREQGLL

Sequences:

>Translated_221_residues
MSNVALHTRKVVVADDHPIVLRAVTDYVNSLPGFHVVASVSSGDALLSAMREQEVNLVVTDFTMHQANDDKDGLRLISHL
MRAYERTPIIVFTMLTNSGVISQLCRMGVAGLVGKEEEIAELGRVCVSVARGVSQSLSPGMAHRLAAVGSIRPGEAAFNA
LTPKELEVVRLFTGGMSLTDIARTLNRSLGTVSTQKRSAMRKLHVDTNVDLINCAREQGLL
>Mature_220_residues
SNVALHTRKVVVADDHPIVLRAVTDYVNSLPGFHVVASVSSGDALLSAMREQEVNLVVTDFTMHQANDDKDGLRLISHLM
RAYERTPIIVFTMLTNSGVISQLCRMGVAGLVGKEEEIAELGRVCVSVARGVSQSLSPGMAHRLAAVGSIRPGEAAFNAL
TPKELEVVRLFTGGMSLTDIARTLNRSLGTVSTQKRSAMRKLHVDTNVDLINCAREQGLL

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=208, Percent_Identity=32.2115384615385, Blast_Score=117, Evalue=4e-28,
Organism=Escherichia coli, GI1788521, Length=200, Percent_Identity=27.5, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23861; Mature: 23730

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVALHTRKVVVADDHPIVLRAVTDYVNSLPGFHVVASVSSGDALLSAMREQEVNLVVT
CCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEEE
DFTMHQANDDKDGLRLISHLMRAYERTPIIVFTMLTNSGVISQLCRMGVAGLVGKEEEIA
EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHH
ELGRVCVSVARGVSQSLSPGMAHRLAAVGSIRPGEAAFNALTPKELEVVRLFTGGMSLTD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCCCCCHHHEEEEECCCCCHHH
IARTLNRSLGTVSTQKRSAMRKLHVDTNVDLINCAREQGLL
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SNVALHTRKVVVADDHPIVLRAVTDYVNSLPGFHVVASVSSGDALLSAMREQEVNLVVT
CCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEEE
DFTMHQANDDKDGLRLISHLMRAYERTPIIVFTMLTNSGVISQLCRMGVAGLVGKEEEIA
EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHH
ELGRVCVSVARGVSQSLSPGMAHRLAAVGSIRPGEAAFNALTPKELEVVRLFTGGMSLTD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCCCCCHHHEEEEECCCCCHHH
IARTLNRSLGTVSTQKRSAMRKLHVDTNVDLINCAREQGLL
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]