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The map label for this gene is 126454873

Identifier: 126454873

GI number: 126454873

Start: 2031294

End: 2032394

Strand: Direct

Name: 126454873

Synonym: BURPS1106A_2048

Alternate gene names: NA

Gene position: 2031294-2032394 (Clockwise)

Preceding gene: 126451554

Following gene: 126451468

Centisome position: 50.93

GC content: 64.67

Gene sequence:

>1101_bases
ATGAAAAAGCTCTTGATCGCGCTGCCGCTCGCCGCGGCCGCTACCACCCACGCCCAGAGCAGCGTCACGCTATACGGCGT
CCTCGAGGACGGCGTCGACTATGTGTCGAACGTGCAGGGTAAGCATCTCGTGCAGCTCGCGTCGGGCGTGACGGCCGGCA
GCCGCTGGGGCGTGCGCGGTACCGAGGATCTCGGCGGGGGCCTGAGCGCGATCTTCCGGCTCGAAAGCGGCTTCGACATC
AATTCCGGCCGCCTCGGCAGCGGTCTTGCGTTCTCGCGCAACGCGTACGTCGGCGTCGGCGACGCGAAGCTCGGCACGCT
CACGCTCGGCCGCCAGTGGGATTCGATCGTCGATTACGTCGAGCCGTTCACGCTGAACGGCAACATCGGCGGCTACTACT
TCGCGCACCCGAACGACATGGACAATACCGACAACGGCTTCCCGATCTCGAACGCGGTCAAGTACCGCAGCCCGACGATC
GCGGGCTTCACGTTCGGCGGCCTCTACGCGTTCGGCGGCCAGCCGGGCCGCTTTTCGGACAACGCGACGTTCAGCGTCGG
CGCGAACTACGCGGCGGGCCCGGTCGGCTTCGGCATCGGCTATTTGCGGATCAACAATCCGGGCGTATCGACGCAGGGTT
ACCAGAACTATCCGGGCTTCACGAACGCGGTGTACGGCAACTATCTCGACGCGGCACGTGCTCAGAAGGTGTTCGGCGTC
GGCGCGTCGTACCAGGTCGTGCAATGGCTGAAGCTGCTGGCCGATTTCACGAACACGAACTTCCAGCAAGGCAGCGCGGG
ACATGATGCGACCTTCCAGAACTATGAGCTGTCGGCGCTCGTCAAGCCGACGCCCGCGGTAACGATCGGCGCGGGCTATA
CGTACACAACGGGCCGCGACCACGCGACGAATGCGGAGCCGAAGTATCATCAGTTCAACCTGAGCGTTGAATACGCGCTG
TCCAAGCGCACGAGCGTCTATGCGATGGGTGCGTTCCAGAAGGCGGCGGGGGATGCACCGGTCGCGCAGATCGCGGGTTT
CAATCCGTCGGGCAACCAGAAGCAGGCGGTCGGGCGAGCCGGTATCCGCCACGTGTTCTGA

Upstream 100 bases:

>100_bases
GTTCGATCGCGGCGCAAGTCGGCGCGTCCGTACGTCCTCACCGGCAGCCGGATCGAACCGCCACTCGCCGTCTTTCAACC
ACCCGCAACGGAACATCATC

Downstream 100 bases:

>100_bases
TGCTCCCCGGCTGACGGCCGGGCGTGACGAGCGGCGCCTGCCGTCGACCATTCCGCTCGGCGGGCGCAGTCAAGCTCCCG
CGCGCCTTCTTTCTCCATAC

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKKLLIALPLAAAATTHAQSSVTLYGVLEDGVDYVSNVQGKHLVQLASGVTAGSRWGVRGTEDLGGGLSAIFRLESGFDI
NSGRLGSGLAFSRNAYVGVGDAKLGTLTLGRQWDSIVDYVEPFTLNGNIGGYYFAHPNDMDNTDNGFPISNAVKYRSPTI
AGFTFGGLYAFGGQPGRFSDNATFSVGANYAAGPVGFGIGYLRINNPGVSTQGYQNYPGFTNAVYGNYLDAARAQKVFGV
GASYQVVQWLKLLADFTNTNFQQGSAGHDATFQNYELSALVKPTPAVTIGAGYTYTTGRDHATNAEPKYHQFNLSVEYAL
SKRTSVYAMGAFQKAAGDAPVAQIAGFNPSGNQKQAVGRAGIRHVF

Sequences:

>Translated_366_residues
MKKLLIALPLAAAATTHAQSSVTLYGVLEDGVDYVSNVQGKHLVQLASGVTAGSRWGVRGTEDLGGGLSAIFRLESGFDI
NSGRLGSGLAFSRNAYVGVGDAKLGTLTLGRQWDSIVDYVEPFTLNGNIGGYYFAHPNDMDNTDNGFPISNAVKYRSPTI
AGFTFGGLYAFGGQPGRFSDNATFSVGANYAAGPVGFGIGYLRINNPGVSTQGYQNYPGFTNAVYGNYLDAARAQKVFGV
GASYQVVQWLKLLADFTNTNFQQGSAGHDATFQNYELSALVKPTPAVTIGAGYTYTTGRDHATNAEPKYHQFNLSVEYAL
SKRTSVYAMGAFQKAAGDAPVAQIAGFNPSGNQKQAVGRAGIRHVF
>Mature_366_residues
MKKLLIALPLAAAATTHAQSSVTLYGVLEDGVDYVSNVQGKHLVQLASGVTAGSRWGVRGTEDLGGGLSAIFRLESGFDI
NSGRLGSGLAFSRNAYVGVGDAKLGTLTLGRQWDSIVDYVEPFTLNGNIGGYYFAHPNDMDNTDNGFPISNAVKYRSPTI
AGFTFGGLYAFGGQPGRFSDNATFSVGANYAAGPVGFGIGYLRINNPGVSTQGYQNYPGFTNAVYGNYLDAARAQKVFGV
GASYQVVQWLKLLADFTNTNFQQGSAGHDATFQNYELSALVKPTPAVTIGAGYTYTTGRDHATNAEPKYHQFNLSVEYAL
SKRTSVYAMGAFQKAAGDAPVAQIAGFNPSGNQKQAVGRAGIRHVF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38735; Mature: 38735

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLIALPLAAAATTHAQSSVTLYGVLEDGVDYVSNVQGKHLVQLASGVTAGSRWGVRG
CCCEEEEECHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCC
TEDLGGGLSAIFRLESGFDINSGRLGSGLAFSRNAYVGVGDAKLGTLTLGRQWDSIVDYV
CHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEECCCCEEEEEECCCHHHHHHHH
EPFTLNGNIGGYYFAHPNDMDNTDNGFPISNAVKYRSPTIAGFTFGGLYAFGGQPGRFSD
CCEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEEECCEEEECCCCCCCCC
NATFSVGANYAAGPVGFGIGYLRINNPGVSTQGYQNYPGFTNAVYGNYLDAARAQKVFGV
CCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCC
GASYQVVQWLKLLADFTNTNFQQGSAGHDATFQNYELSALVKPTPAVTIGAGYTYTTGRD
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCEEECCCCC
HATNAEPKYHQFNLSVEYALSKRTSVYAMGAFQKAAGDAPVAQIAGFNPSGNQKQAVGRA
CCCCCCCCEEEEEEEEEEEECCCCEEEEECCHHHHCCCCCHHHHCCCCCCCCHHHHHHHH
GIRHVF
HHHCCC
>Mature Secondary Structure
MKKLLIALPLAAAATTHAQSSVTLYGVLEDGVDYVSNVQGKHLVQLASGVTAGSRWGVRG
CCCEEEEECHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCC
TEDLGGGLSAIFRLESGFDINSGRLGSGLAFSRNAYVGVGDAKLGTLTLGRQWDSIVDYV
CHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEECCCCEEEEEECCCHHHHHHHH
EPFTLNGNIGGYYFAHPNDMDNTDNGFPISNAVKYRSPTIAGFTFGGLYAFGGQPGRFSD
CCEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEEECCEEEECCCCCCCCC
NATFSVGANYAAGPVGFGIGYLRINNPGVSTQGYQNYPGFTNAVYGNYLDAARAQKVFGV
CCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCC
GASYQVVQWLKLLADFTNTNFQQGSAGHDATFQNYELSALVKPTPAVTIGAGYTYTTGRD
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCEEECCCCC
HATNAEPKYHQFNLSVEYALSKRTSVYAMGAFQKAAGDAPVAQIAGFNPSGNQKQAVGRA
CCCCCCCCEEEEEEEEEEEECCCCEEEEECCHHHHCCCCCHHHHCCCCCCCCHHHHHHHH
GIRHVF
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]