| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454846
Identifier: 126454846
GI number: 126454846
Start: 2131934
End: 2132383
Strand: Direct
Name: 126454846
Synonym: BURPS1106A_2147
Alternate gene names: NA
Gene position: 2131934-2132383 (Clockwise)
Preceding gene: 126455117
Following gene: 126451959
Centisome position: 53.45
GC content: 70.67
Gene sequence:
>450_bases TTGACGAAAATCGACATGATCGAACTGAAAAACGTCGACCTCAGCAACGATCCGGATGCGCTGCGCGTCGTCAAGGACGA GACGGTTCAGGTCGAGTTCGCCGCGCAGACCGGCGAGCTGACGAGCCTCGAAGGCCCGAACCGCTACGCGGCGGGCGACG CGCTCGTCACCGGTTCGACGGGCGACCGCTGGGTGGTGTCGCGCGAGCGCTTCGACGCGAAGTACGCGCCCGTGGCGGCA GGCGGCGCGCACGGCGAGCCGGGCGCGTACCGCAACCGTCCCGCCGTCGTGCTCGCGAAGCGGATGGACGCGCCGTTCTC GATCGCGCGCTCGGCGGGCGGCGACACGCTGCGCGGCGACGCGGGCGACTGGGTGATGCAGTACGCGCCGGGCGACTATG GCGTCGTGCAGGCGAAGCGCTTCGCGCAGGTGTACCGCGCCGCCGACTGA
Upstream 100 bases:
>100_bases CAAATCGAGACGCGATCACTTCATCTTTGTCGCAACGCCTGTCTCTCGCAAGGTCGGCGTTCACGCGGGCTTGGATTCGC GCTAAAGTGATGCGTTTTTA
Downstream 100 bases:
>100_bases CACGCGGCGCGCCCGCGCGTTGCCGCGCACGCATCGCGGCTGCGGCCCGAATCGTGCCGGCCCCGCGCCGACGCCACATC GACGCCACATCGACGCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTKIDMIELKNVDLSNDPDALRVVKDETVQVEFAAQTGELTSLEGPNRYAAGDALVTGSTGDRWVVSRERFDAKYAPVAA GGAHGEPGAYRNRPAVVLAKRMDAPFSIARSAGGDTLRGDAGDWVMQYAPGDYGVVQAKRFAQVYRAAD
Sequences:
>Translated_149_residues MTKIDMIELKNVDLSNDPDALRVVKDETVQVEFAAQTGELTSLEGPNRYAAGDALVTGSTGDRWVVSRERFDAKYAPVAA GGAHGEPGAYRNRPAVVLAKRMDAPFSIARSAGGDTLRGDAGDWVMQYAPGDYGVVQAKRFAQVYRAAD >Mature_148_residues TKIDMIELKNVDLSNDPDALRVVKDETVQVEFAAQTGELTSLEGPNRYAAGDALVTGSTGDRWVVSRERFDAKYAPVAAG GAHGEPGAYRNRPAVVLAKRMDAPFSIARSAGGDTLRGDAGDWVMQYAPGDYGVVQAKRFAQVYRAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16008; Mature: 15877
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIDMIELKNVDLSNDPDALRVVKDETVQVEFAAQTGELTSLEGPNRYAAGDALVTGST CCCCEEEEEECCCCCCCCCEEEEEECCEEEEEEECCCCCEEECCCCCCCCCCCEEEECCC GDRWVVSRERFDAKYAPVAAGGAHGEPGAYRNRPAVVLAKRMDAPFSIARSAGGDTLRGD CCEEEEEHHHCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCC AGDWVMQYAPGDYGVVQAKRFAQVYRAAD CCCEEEEECCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TKIDMIELKNVDLSNDPDALRVVKDETVQVEFAAQTGELTSLEGPNRYAAGDALVTGST CCCEEEEEECCCCCCCCCEEEEEECCEEEEEEECCCCCEEECCCCCCCCCCCEEEECCC GDRWVVSRERFDAKYAPVAAGGAHGEPGAYRNRPAVVLAKRMDAPFSIARSAGGDTLRGD CCEEEEEHHHCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCC AGDWVMQYAPGDYGVVQAKRFAQVYRAAD CCCEEEEECCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA