Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126454826

Identifier: 126454826

GI number: 126454826

Start: 278409

End: 279149

Strand: Direct

Name: 126454826

Synonym: BURPS1106A_0299

Alternate gene names: NA

Gene position: 278409-279149 (Clockwise)

Preceding gene: 126451939

Following gene: 126451489

Centisome position: 6.98

GC content: 68.56

Gene sequence:

>741_bases
ATGAATCTCGACGCCGCGAGCCGCAACCTGACGGTCGCATCGCTGCTTACGCTGTCGGGCGGCTATCTCGACGTATACAC
GTACGTCGGCCACGGTCACGTGTTCGCGAACACGATGACGGGTAACGTCGCGCTGCTCGGCATCAACGTTTCGGCGGGCG
ACTGGGCGCAGGCGCTGCATCACGTGCCGCCGCTCGCGGGCTTCGTGATCGCGGTGTTCGTCGCGCACACGCTAGGGCTC
GCCGCGCAGAAGGGCTGGGTCCGGCATACCGCGTTCATCAGCCTGATCGTCGAGATCGGTTTTCTCGCGTTCGCATCGGC
CGGTTGGCCCGCGATGTCGAGCGCATGGCTGATCCCGGGCATCTCGTTCGTCGCGACGCTGCAGACGCTGTCGTTTACGC
ATCTCGAGAACCTGTCGTACACCTCGGTGATGACGACGGGCAATCTGCGGCGTGCCGCGCAATTGCTGTTCGCCGGGCTG
ATTCCGCGTTACGACGCGCTCGCGCTGCACGATTCCGGTCTGCTCGCCGTGATCAGCCTGTGCTTTCTCATGGGCGCGGT
GGCGGGCGGCTTCGTCACGCGGCTCGTCGGCGACGGCGCGTTGTGGGGCGCGGTGCTGCTGCTCGCGGCGGCGTTCGCGG
AGATCGTACGGCGCGCGCGTCACGATTCGGGCGCCGGCGCCGCGCGGGCCGAACGCGCCGCGCGCGACGCGCCGGCCGAA
CGCGCCGCGCATGAGCGGTAG

Upstream 100 bases:

>100_bases
TCGTCGGCGGCGATCACGAAGTCGACTGCAAGATGGACGCCGGCAATTTCATGCTGAAGGCGTGCTATCTGAAGAAGGTT
TGAGCGGCGCGCGACGGGCG

Downstream 100 bases:

>100_bases
CGAGGGCGCACCCCTGCCGCTTGGTTTGCGCGATTCCGGTGCCGCGCATTTTCTCCGGGCGGCAGGCGTAGGCGTTCTAC
GCCGATTTCCTCGGCTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNLDAASRNLTVASLLTLSGGYLDVYTYVGHGHVFANTMTGNVALLGINVSAGDWAQALHHVPPLAGFVIAVFVAHTLGL
AAQKGWVRHTAFISLIVEIGFLAFASAGWPAMSSAWLIPGISFVATLQTLSFTHLENLSYTSVMTTGNLRRAAQLLFAGL
IPRYDALALHDSGLLAVISLCFLMGAVAGGFVTRLVGDGALWGAVLLLAAAFAEIVRRARHDSGAGAARAERAARDAPAE
RAAHER

Sequences:

>Translated_246_residues
MNLDAASRNLTVASLLTLSGGYLDVYTYVGHGHVFANTMTGNVALLGINVSAGDWAQALHHVPPLAGFVIAVFVAHTLGL
AAQKGWVRHTAFISLIVEIGFLAFASAGWPAMSSAWLIPGISFVATLQTLSFTHLENLSYTSVMTTGNLRRAAQLLFAGL
IPRYDALALHDSGLLAVISLCFLMGAVAGGFVTRLVGDGALWGAVLLLAAAFAEIVRRARHDSGAGAARAERAARDAPAE
RAAHER
>Mature_246_residues
MNLDAASRNLTVASLLTLSGGYLDVYTYVGHGHVFANTMTGNVALLGINVSAGDWAQALHHVPPLAGFVIAVFVAHTLGL
AAQKGWVRHTAFISLIVEIGFLAFASAGWPAMSSAWLIPGISFVATLQTLSFTHLENLSYTSVMTTGNLRRAAQLLFAGL
IPRYDALALHDSGLLAVISLCFLMGAVAGGFVTRLVGDGALWGAVLLLAAAFAEIVRRARHDSGAGAARAERAARDAPAE
RAAHER

Specific function: Unknown

COG id: COG3619

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25817; Mature: 25817

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDAASRNLTVASLLTLSGGYLDVYTYVGHGHVFANTMTGNVALLGINVSAGDWAQALH
CCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCEEEEEEECCCEEEEEEECCCCHHHHHHH
HVPPLAGFVIAVFVAHTLGLAAQKGWVRHTAFISLIVEIGFLAFASAGWPAMSSAWLIPG
HCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
ISFVATLQTLSFTHLENLSYTSVMTTGNLRRAAQLLFAGLIPRYDALALHDSGLLAVISL
HHHHHHHHHHHHHHHCCCCHHHEEECCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHH
CFLMGAVAGGFVTRLVGDGALWGAVLLLAAAFAEIVRRARHDSGAGAARAERAARDAPAE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHH
RAAHER
HHCCCC
>Mature Secondary Structure
MNLDAASRNLTVASLLTLSGGYLDVYTYVGHGHVFANTMTGNVALLGINVSAGDWAQALH
CCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCEEEEEEECCCEEEEEEECCCCHHHHHHH
HVPPLAGFVIAVFVAHTLGLAAQKGWVRHTAFISLIVEIGFLAFASAGWPAMSSAWLIPG
HCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
ISFVATLQTLSFTHLENLSYTSVMTTGNLRRAAQLLFAGLIPRYDALALHDSGLLAVISL
HHHHHHHHHHHHHHHCCCCHHHEEECCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHH
CFLMGAVAGGFVTRLVGDGALWGAVLLLAAAFAEIVRRARHDSGAGAARAERAARDAPAE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHH
RAAHER
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA