| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is fusA [H]
Identifier: 126454776
GI number: 126454776
Start: 1660709
End: 1662466
Strand: Reverse
Name: fusA [H]
Synonym: BURPS1106A_1700
Alternate gene names: 126454776
Gene position: 1662466-1660709 (Counterclockwise)
Preceding gene: 126451818
Following gene: 126452079
Centisome position: 41.68
GC content: 73.61
Gene sequence:
>1758_bases ATGAGAGGGACGCTTGCACTCGCGGTTCTTGCAATCTCATTAATAATGGCCGGATGCGCAAGCATGGGCGATGTTGCACC GCAAGACAAGCAGGTCGATCCGGCGTCGCTCGATGCGGGCGCGGCGATCGCGGCGGCCGAGCGCGACGCCGGCTGGCCCG CGGCCGACTGGTGGCGCGCGTATCGCGATCCGCAGCTCGATTCGTGGATCGCCGCGTCGCTCGCCGGCAACCCTTCGCTC GCCGCCGCGCAGGCCCGCGTGCGCGAGGCGCAGTCGCTCGCGCGCATCGCGCACGCCGAGGAGCTGCCGCAGTTGAACGG CAACCTGTCGCTGATGCGCCAGCACTGGCCGGACAACGTCTATTACGGCCCGGGCCCGCTCGCGAACGCCGACACGTGGA ACAACACGGGCACGCTGAGCCTGTCGTACCACCTCGATCTGTGGGGCAAGGACAAGCACAACGCCGAGCGCGCGCTCGAC GCGGCGCGCGCCCGCGCGGCCGACGCGCGTGCCGCGCAGCTCGAGCTCGAGGCGAACGTCGTGCGCGCGTACGTCGATTT CGCGAAGAACTACGCGCTCCTCGACATCGCGCACGCGACCTACGAGCGCCAGAACGCGCTCGCCGAACTGGCGCGCAAGC GCCTGCGCGCGGGCATCGGCACGCAACTCGAGGTGAGCCAGGCCGAGGCGCCGCTGCCCGATTATTCGCGGCAGATCGAC TCGTATGAAGAGGCGATCCAGCTCGGCCGTCACCAGCTCGCCGCGCTCGCGGGCAAGGGGCCGGGCGCGGGCGCCTCGCT CGCGCGGCCGAAGCTCGCGCTCGACGCGAACGCCGCCCTGCCGTCCGCGCTGCCCGCCGAGCTGCTCGGCCGCCGGCCGG ACATCGTCGCCGCGCGCTGGATGGTCGACGCGCAGGCGCGCGGCATCGACGTCGCGAAGGCCGCGTTCTATCCGAACGTC GACCTGATCGCGTCGCTCGGCGGCTTCGCGGTCAGCGCGCCGTTCGCGACGTTCCTGCGCGCGATGAACGGCGGCTGGTC GGCCGGCCCCGCGCTCACGCTGCCGATCTTCGAGGGCGGCCGGCTGCGCGCGCAACTGGGCGTCGCGTCGGCGGGCTACG ACCAGGCGGTCGAGCACTACAACCAGACGATCGTCGGCGCGCTGAAGGACATCGCCGACAACGTCGTGCGCCTGCATTCG CTCGATTCGCAGCAAAAGGACGCGGCGCGCGCGGTCTCGCTCACGCGGCGCTCGTACGATCTGTCGCATGCGGGCTTCAG CCGCGGGCTCACCGACTACGTGAACGTGCTCATCGCGCAGAGCCAGTTGCTGACCGCGCAGGAGAACCAGACCCGCATCG AGGCCGCGCGCCTCGCCGCGCACGCGTCGCTGATGGTCGCGCTCGGCGGCGGGCTCGAAACCGGGCGCGACGCGCCGCAC GACGCGCCCGCGGGCGACGCGCGGCGGACGGGTGCTTCGGGTGCCTCGGGTGCCTCGGGTGCCTCGGGTGCCTCGGGTGC CTCGGGTGCTTCGAGCACCGCGGGCGCTTCGGCCACCGCATCCGCGTCGGCCGCCGGCCACGCGCCGGCTGGCGCCGCTG CTCCGGCATCGCCCGCCGGCATCCGCGCGGCCGCCAGCGCTCGCGCGTCAATGCCGGCTCCCGCCGCGGCGGCGACCGCG CCCGCCTTCGCGTCGCCCGTCGCCGGCGCCTCGACGCCGATGCCCGCTGCGACAGCGGCGGCCCGCGCCGCCCGCTAA
Upstream 100 bases:
>100_bases TGCGTTGCACCATTCTCGGTTTATTCGGCAATCCGCAAAAAAATATAATCGCATCGACTCATCTTTATCCGAAAGGGAGA AAATCGTGCAGTCTCCGGCA
Downstream 100 bases:
>100_bases CCAAGGAGCCGATCTCATGTCAGCCGCGTCCCCCCCTTCCGCTGCGACGCCGCAATCGGCGGGCGCCGCCTTCGTCGCGT CGATGAGCGACTGGGCGCGC
Product: putative fusaric acid efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRAYRDPQLDSWIAASLAGNPSL AAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALD AARARAADARAAQLELEANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID SYEEAIQLGRHQLAALAGKGPGAGASLARPKLALDANAALPSALPAELLGRRPDIVAARWMVDAQARGIDVAKAAFYPNV DLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHS LDSQQKDAARAVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLMVALGGGLETGRDAPH DAPAGDARRTGASGASGASGASGASGASGASSTAGASATASASAAGHAPAGAAAPASPAGIRAAASARASMPAPAAAATA PAFASPVAGASTPMPAATAAARAAR
Sequences:
>Translated_585_residues MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRAYRDPQLDSWIAASLAGNPSL AAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALD AARARAADARAAQLELEANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID SYEEAIQLGRHQLAALAGKGPGAGASLARPKLALDANAALPSALPAELLGRRPDIVAARWMVDAQARGIDVAKAAFYPNV DLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHS LDSQQKDAARAVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLMVALGGGLETGRDAPH DAPAGDARRTGASGASGASGASGASGASGASSTAGASATASASAAGHAPAGAAAPASPAGIRAAASARASMPAPAAAATA PAFASPVAGASTPMPAATAAARAAR >Mature_585_residues MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRAYRDPQLDSWIAASLAGNPSL AAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALD AARARAADARAAQLELEANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID SYEEAIQLGRHQLAALAGKGPGAGASLARPKLALDANAALPSALPAELLGRRPDIVAARWMVDAQARGIDVAKAAFYPNV DLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHS LDSQQKDAARAVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLMVALGGGLETGRDAPH DAPAGDARRTGASGASGASGASGASGASGASSTAGASATASASAAGHAPAGAAAPASPAGIRAAASARASMPAPAAAATA PAFASPVAGASTPMPAATAAARAAR
Specific function: Involved in the resistance (detoxification) of the fungal toxin fusaric acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=479, Percent_Identity=30.062630480167, Blast_Score=189, Evalue=5e-49, Organism=Escherichia coli, GI1786785, Length=480, Percent_Identity=28.5416666666667, Blast_Score=138, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 59938; Mature: 59938
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHH YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV HCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV EECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHEEHHHHH VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHH SYEEAIQLGRHQLAALAGKGPGAGASLARPKLALDANAALPSALPAELLGRRPDIVAARW HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEEHH MVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGG EEHHHHCCCHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC RLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAARAVSLTRRSYD CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC LSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLMVALGGGLETGRDAPH CCHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCC DAPAGDARRTGASGASGASGASGASGASGASSTAGASATASASAAGHAPAGAAAPASPAG CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IRAAASARASMPAPAAAATAPAFASPVAGASTPMPAATAAARAAR HHHHHHHHCCCCCCCHHHCCCHHHCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHH YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV HCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV EECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHEEHHHHH VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHH SYEEAIQLGRHQLAALAGKGPGAGASLARPKLALDANAALPSALPAELLGRRPDIVAARW HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEEHH MVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGG EEHHHHCCCHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC RLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAARAVSLTRRSYD CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC LSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLMVALGGGLETGRDAPH CCHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCC DAPAGDARRTGASGASGASGASGASGASGASSTAGASATASASAAGHAPAGAAAPASPAG CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IRAAASARASMPAPAAAATAPAFASPVAGASTPMPAATAAARAAR HHHHHHHHCCCCCCCHHHCCCHHHCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1370369 [H]