| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454774
Identifier: 126454774
GI number: 126454774
Start: 949102
End: 949884
Strand: Direct
Name: 126454774
Synonym: BURPS1106A_0967
Alternate gene names: NA
Gene position: 949102-949884 (Clockwise)
Preceding gene: 126453919
Following gene: 126454710
Centisome position: 23.8
GC content: 65.64
Gene sequence:
>783_bases ATGAACAAACTCCCTGCGATCACGCTCGCGTTCTGGGTCATGAAGATCTGCGCGACGACGCTCGGCGAAACCGGCGGCGA TCTGCTGTCGATGACGCTCGACGTCGGCTACGCGTACAGCTCGCTGATCCTGTTCTCGTTTTTCATCGTCACGCTCGCCG CGCAGCTCGCGGCGACGCGCTACCGCCCGGCGATCTACTGGGCGGTCATCGTCGCGACCAGCACGGCCGGCACGACGATG TCCGATTTCATGGACCGCACGCTCGGCCTCGGCTATGCGGCGGGCTCCGGCATTCTCGTCGCGATCCTGCTGTCGATCTT CGCGGTGTGGCGCCTGCAGGGCGAATCGCTCGCGGTGACGGAAATCCGCACGCGCAAGGTCGAGGTGCTCTACTGGATCG CGATTCTTTTCTCGAACACGCTCGGCACCGCGCTCGGCGATTTCCTCGCCGACAGCTCGGGCCTCGGCTTCGCGGGCGGC GCGTTCCTGATCGGCGGTTTGCTCGCGGCGATCGTGCTCGCCGCGTACTTCACGAACGTATCGAAGGTGTTCCTGTTCTG GGCGGCGTTCGTGCTCACGCGTCCGTTCGGCGCGACGGTGGGCGACTTGCTGACGAAGCCCGTCGCGAAGGGCGGGTTGG GGTTCGGTACGGTCGGTTCGTCGGCGATTCTCGCGGGCGGGCTGATCGCGCTCGTGATTTATGCGATGTTTGCCGAGGCG AAACGGGTGAAGCAGGCGCGTGCGCCGAGAATGGGCTGGAAGCAGCCGGCGCTCGAGGAGTGA
Upstream 100 bases:
>100_bases GCATACGGGTTAACGCTCTCTTAAGCGCCCCTTCTCTAGCATTCGAATCTCGTGCCGCGACGCGGCGATTCAACGGTTCC GAATTCCTTCGAGGGCTCGC
Downstream 100 bases:
>100_bases GCGCCGCCGAGCCGCGAAAGGGCCGGGGACGGGGCGGAGCCGCGCGCGCGGGAGCGGCGGGGCCCCTCGCGCGCGTCGCC GTTTCGAATCAGCCGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MNKLPAITLAFWVMKICATTLGETGGDLLSMTLDVGYAYSSLILFSFFIVTLAAQLAATRYRPAIYWAVIVATSTAGTTM SDFMDRTLGLGYAAGSGILVAILLSIFAVWRLQGESLAVTEIRTRKVEVLYWIAILFSNTLGTALGDFLADSSGLGFAGG AFLIGGLLAAIVLAAYFTNVSKVFLFWAAFVLTRPFGATVGDLLTKPVAKGGLGFGTVGSSAILAGGLIALVIYAMFAEA KRVKQARAPRMGWKQPALEE
Sequences:
>Translated_260_residues MNKLPAITLAFWVMKICATTLGETGGDLLSMTLDVGYAYSSLILFSFFIVTLAAQLAATRYRPAIYWAVIVATSTAGTTM SDFMDRTLGLGYAAGSGILVAILLSIFAVWRLQGESLAVTEIRTRKVEVLYWIAILFSNTLGTALGDFLADSSGLGFAGG AFLIGGLLAAIVLAAYFTNVSKVFLFWAAFVLTRPFGATVGDLLTKPVAKGGLGFGTVGSSAILAGGLIALVIYAMFAEA KRVKQARAPRMGWKQPALEE >Mature_260_residues MNKLPAITLAFWVMKICATTLGETGGDLLSMTLDVGYAYSSLILFSFFIVTLAAQLAATRYRPAIYWAVIVATSTAGTTM SDFMDRTLGLGYAAGSGILVAILLSIFAVWRLQGESLAVTEIRTRKVEVLYWIAILFSNTLGTALGDFLADSSGLGFAGG AFLIGGLLAAIVLAAYFTNVSKVFLFWAAFVLTRPFGATVGDLLTKPVAKGGLGFGTVGSSAILAGGLIALVIYAMFAEA KRVKQARAPRMGWKQPALEE
Specific function: Unknown
COG id: COG4705
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27507; Mature: 27507
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLPAITLAFWVMKICATTLGETGGDLLSMTLDVGYAYSSLILFSFFIVTLAAQLAATR CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRPAIYWAVIVATSTAGTTMSDFMDRTLGLGYAAGSGILVAILLSIFAVWRLQGESLAVT CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHH EIRTRKVEVLYWIAILFSNTLGTALGDFLADSSGLGFAGGAFLIGGLLAAIVLAAYFTNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SKVFLFWAAFVLTRPFGATVGDLLTKPVAKGGLGFGTVGSSAILAGGLIALVIYAMFAEA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KRVKQARAPRMGWKQPALEE HHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNKLPAITLAFWVMKICATTLGETGGDLLSMTLDVGYAYSSLILFSFFIVTLAAQLAATR CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRPAIYWAVIVATSTAGTTMSDFMDRTLGLGYAAGSGILVAILLSIFAVWRLQGESLAVT CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHH EIRTRKVEVLYWIAILFSNTLGTALGDFLADSSGLGFAGGAFLIGGLLAAIVLAAYFTNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SKVFLFWAAFVLTRPFGATVGDLLTKPVAKGGLGFGTVGSSAILAGGLIALVIYAMFAEA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KRVKQARAPRMGWKQPALEE HHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA