Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126454774

Identifier: 126454774

GI number: 126454774

Start: 949102

End: 949884

Strand: Direct

Name: 126454774

Synonym: BURPS1106A_0967

Alternate gene names: NA

Gene position: 949102-949884 (Clockwise)

Preceding gene: 126453919

Following gene: 126454710

Centisome position: 23.8

GC content: 65.64

Gene sequence:

>783_bases
ATGAACAAACTCCCTGCGATCACGCTCGCGTTCTGGGTCATGAAGATCTGCGCGACGACGCTCGGCGAAACCGGCGGCGA
TCTGCTGTCGATGACGCTCGACGTCGGCTACGCGTACAGCTCGCTGATCCTGTTCTCGTTTTTCATCGTCACGCTCGCCG
CGCAGCTCGCGGCGACGCGCTACCGCCCGGCGATCTACTGGGCGGTCATCGTCGCGACCAGCACGGCCGGCACGACGATG
TCCGATTTCATGGACCGCACGCTCGGCCTCGGCTATGCGGCGGGCTCCGGCATTCTCGTCGCGATCCTGCTGTCGATCTT
CGCGGTGTGGCGCCTGCAGGGCGAATCGCTCGCGGTGACGGAAATCCGCACGCGCAAGGTCGAGGTGCTCTACTGGATCG
CGATTCTTTTCTCGAACACGCTCGGCACCGCGCTCGGCGATTTCCTCGCCGACAGCTCGGGCCTCGGCTTCGCGGGCGGC
GCGTTCCTGATCGGCGGTTTGCTCGCGGCGATCGTGCTCGCCGCGTACTTCACGAACGTATCGAAGGTGTTCCTGTTCTG
GGCGGCGTTCGTGCTCACGCGTCCGTTCGGCGCGACGGTGGGCGACTTGCTGACGAAGCCCGTCGCGAAGGGCGGGTTGG
GGTTCGGTACGGTCGGTTCGTCGGCGATTCTCGCGGGCGGGCTGATCGCGCTCGTGATTTATGCGATGTTTGCCGAGGCG
AAACGGGTGAAGCAGGCGCGTGCGCCGAGAATGGGCTGGAAGCAGCCGGCGCTCGAGGAGTGA

Upstream 100 bases:

>100_bases
GCATACGGGTTAACGCTCTCTTAAGCGCCCCTTCTCTAGCATTCGAATCTCGTGCCGCGACGCGGCGATTCAACGGTTCC
GAATTCCTTCGAGGGCTCGC

Downstream 100 bases:

>100_bases
GCGCCGCCGAGCCGCGAAAGGGCCGGGGACGGGGCGGAGCCGCGCGCGCGGGAGCGGCGGGGCCCCTCGCGCGCGTCGCC
GTTTCGAATCAGCCGCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNKLPAITLAFWVMKICATTLGETGGDLLSMTLDVGYAYSSLILFSFFIVTLAAQLAATRYRPAIYWAVIVATSTAGTTM
SDFMDRTLGLGYAAGSGILVAILLSIFAVWRLQGESLAVTEIRTRKVEVLYWIAILFSNTLGTALGDFLADSSGLGFAGG
AFLIGGLLAAIVLAAYFTNVSKVFLFWAAFVLTRPFGATVGDLLTKPVAKGGLGFGTVGSSAILAGGLIALVIYAMFAEA
KRVKQARAPRMGWKQPALEE

Sequences:

>Translated_260_residues
MNKLPAITLAFWVMKICATTLGETGGDLLSMTLDVGYAYSSLILFSFFIVTLAAQLAATRYRPAIYWAVIVATSTAGTTM
SDFMDRTLGLGYAAGSGILVAILLSIFAVWRLQGESLAVTEIRTRKVEVLYWIAILFSNTLGTALGDFLADSSGLGFAGG
AFLIGGLLAAIVLAAYFTNVSKVFLFWAAFVLTRPFGATVGDLLTKPVAKGGLGFGTVGSSAILAGGLIALVIYAMFAEA
KRVKQARAPRMGWKQPALEE
>Mature_260_residues
MNKLPAITLAFWVMKICATTLGETGGDLLSMTLDVGYAYSSLILFSFFIVTLAAQLAATRYRPAIYWAVIVATSTAGTTM
SDFMDRTLGLGYAAGSGILVAILLSIFAVWRLQGESLAVTEIRTRKVEVLYWIAILFSNTLGTALGDFLADSSGLGFAGG
AFLIGGLLAAIVLAAYFTNVSKVFLFWAAFVLTRPFGATVGDLLTKPVAKGGLGFGTVGSSAILAGGLIALVIYAMFAEA
KRVKQARAPRMGWKQPALEE

Specific function: Unknown

COG id: COG4705

COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27507; Mature: 27507

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLPAITLAFWVMKICATTLGETGGDLLSMTLDVGYAYSSLILFSFFIVTLAAQLAATR
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRPAIYWAVIVATSTAGTTMSDFMDRTLGLGYAAGSGILVAILLSIFAVWRLQGESLAVT
CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHH
EIRTRKVEVLYWIAILFSNTLGTALGDFLADSSGLGFAGGAFLIGGLLAAIVLAAYFTNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SKVFLFWAAFVLTRPFGATVGDLLTKPVAKGGLGFGTVGSSAILAGGLIALVIYAMFAEA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KRVKQARAPRMGWKQPALEE
HHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKLPAITLAFWVMKICATTLGETGGDLLSMTLDVGYAYSSLILFSFFIVTLAAQLAATR
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRPAIYWAVIVATSTAGTTMSDFMDRTLGLGYAAGSGILVAILLSIFAVWRLQGESLAVT
CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHH
EIRTRKVEVLYWIAILFSNTLGTALGDFLADSSGLGFAGGAFLIGGLLAAIVLAAYFTNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SKVFLFWAAFVLTRPFGATVGDLLTKPVAKGGLGFGTVGSSAILAGGLIALVIYAMFAEA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KRVKQARAPRMGWKQPALEE
HHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA