| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is yheS [H]
Identifier: 126454765
GI number: 126454765
Start: 2468438
End: 2470378
Strand: Direct
Name: yheS [H]
Synonym: BURPS1106A_2511
Alternate gene names: 126454765
Gene position: 2468438-2470378 (Clockwise)
Preceding gene: 126453036
Following gene: 126453215
Centisome position: 61.89
GC content: 68.52
Gene sequence:
>1941_bases GTGATCCGTTTCAATCAGTTCAGCCTCGCCCGCGGCACGAAGCCGCTCTTCGACGCGACCTCGTTCACGCTGAATCCCGG CGAGAAGGCGGGCCTCGTCGGCGCGAACGGCGCCGGCAAATCGACGCTCTTCGCGGTACTGCGCGGCGAGCTGCACGCGG ACGCGGGCGACTTCTCGATGCCGCCGGCATGGCGCATCGCGCACGTGTCGCAGGAAACGCCCGCCGTCGAGCGCAGCGCG CTCGACTACACATTGGACGGCGACGCCGCGTTGCGCGCGATCGAGGCGCGCATCGCGCAGGCGTCCGCCGCGCACGACGG CGCAGCCGAGGCCGACGCGCACGCGGCGTTCGCGGACGCCGACGGCTACACCGCGCCCGCGCGCGCCGAGGCGCTGCTGC TCGGGCTCGGCTTCACGCTCGCGCAGACGCGCGAGCCCGTCGCGAGCTTCTCGGGCGGCTGGCGCATGCGCCTGAATCTC GCGCAGGCGCTGATGTGCCGCTCGGATCTGCTGCTGCTCGACGAGCCGACGAACCACCTGGATCTCGACGCGATCGTCTG GCTCGAAGACTGGCTGCATCGCTATCCGGGCACGCTCGTCATCATCTCGCACGATCGCGAATTCCTCGACGCCGTCTGCG ACGTGACGCTGCATCTCGAGAATCGCCAGGTGAAGCGTTACGGCGGCAACTACTCGCAGTTCGAAGTGCTGCGCGCGCAG CAGCTCGAATTGCAGCAAAGCGCATACGAAAAGCAGCAGAAGACGATTGCGCATCTGCAGAGCTTCGTCGACCGCTTCAA GGCGAAGGCGTCGAAGGCGAAGCAGGCGCAAAGCCGGGTGAAGGCGCTCGAGAAGATGGAGCGGATCGCGCCCGCGCACA TCGCTTCGCCATTCACGTTCGAATTCCGCACGCCCGATTCCGCGCCGAACCCGATGCTCGTGATGGAAAACGTGCGCTGC GGCTACCGCGCGGACGACGGCGGCGAAATCCCGATCGTCGAGCGCGTCGCGCTGTCGATCCAGAACGGCCAGCGCATCGG CCTGCTCGGCGCGAACGGCCAGGGCAAGTCGACGCTCATCAAGACGCTCGCGGGCACGCTCGCGCCGCTGTCGGGCGAGC TGCGCACCGGCCGCGGGCTCACGATCGGCTATTTCGCCCAGCACCAGCTCGAGACGCTGCGCGAGGACGATTCGGCGCTC GCGCATCTCGCGCGCCTCGCCCCGGACACGCGCGAGCAGGAACTGCGCGACTTTCTCGGCGGCTTCAACTTCTCCGGCGA GATGGCGACCGCGCCGATCGCGCCGTTCTCCGGCGGCGAGAAAGCGCGGCTCGCGCTCGCGCTGATCATCTGGCGGAAGC CGAACCTGCTGCTGCTCGACGAGCCGACGAACCACCTCGATCTGGAAACGCGCCACGCGCTCACGATGGCACTCGCGCAA TTCGAGGGCACGCTGATCCTCGTGTCGCACGACCGTCACCTGCTGCGCGCGACGACCGACCAGTTCATGCTGGTCGCGAA GCACCGGCTGCAGCCGTTCGACGGCGATCTCGACGACTACCGCGACTGGCTGCTGCAGCACGCGGCCGAACAGCGCGCGG CGGCGAAGGCAGCCTGCGGCCCGGCGGGCGACGCCGACGACGGCGCGCCCGCCGTGAATCGCAAGGACCAGAAACGGCAG GAAGCCGAAGCGCGCCAGCGTCTGTCGCAGCTGAAGAAACCGCTGCAGGCGCGGATCACGAAGATCGAGAAGGAAATGGA GCGGCTGCACGCGCAGAAGGCGGAGCTCGACGCGTTCGTCGCCGATCCGGCGAGCTATGCGGCGGACCAGAAGACGCGGC TCACCGAGGCGATCCGCAAGCTCGGCGACGTCAACGGCCAGCTCGAAACGCTCGAGGCGGACTGGCTCGGCGCGCAGGAC GAGCTGGAAAAAATCGGGTGA
Upstream 100 bases:
>100_bases GTCTAGGCGAATTCGGCGCGGCGCGCACATTCCGCCATCCGGACGATCCCCCGAATGCGGCGCGCGGCTAGAATAACGGT TTTCCCCAGCATTTCGCGCC
Downstream 100 bases:
>100_bases CGAGCGCCGCACGGCAGCGGCATCGCAGCGCTGTCATGCGGCGTTCAGCGCCCGGGCGCCCGGGGCCGGGTTCTCGAGGC TTGAAACTCAGCGCCGCGGC
Product: ABC transporter, ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MIRFNQFSLARGTKPLFDATSFTLNPGEKAGLVGANGAGKSTLFAVLRGELHADAGDFSMPPAWRIAHVSQETPAVERSA LDYTLDGDAALRAIEARIAQASAAHDGAAEADAHAAFADADGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLVIISHDREFLDAVCDVTLHLENRQVKRYGGNYSQFEVLRAQ QLELQQSAYEKQQKTIAHLQSFVDRFKAKASKAKQAQSRVKALEKMERIAPAHIASPFTFEFRTPDSAPNPMLVMENVRC GYRADDGGEIPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGELRTGRGLTIGYFAQHQLETLREDDSAL AHLARLAPDTREQELRDFLGGFNFSGEMATAPIAPFSGGEKARLALALIIWRKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAACGPAGDADDGAPAVNRKDQKRQ EAEARQRLSQLKKPLQARITKIEKEMERLHAQKAELDAFVADPASYAADQKTRLTEAIRKLGDVNGQLETLEADWLGAQD ELEKIG
Sequences:
>Translated_646_residues MIRFNQFSLARGTKPLFDATSFTLNPGEKAGLVGANGAGKSTLFAVLRGELHADAGDFSMPPAWRIAHVSQETPAVERSA LDYTLDGDAALRAIEARIAQASAAHDGAAEADAHAAFADADGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLVIISHDREFLDAVCDVTLHLENRQVKRYGGNYSQFEVLRAQ QLELQQSAYEKQQKTIAHLQSFVDRFKAKASKAKQAQSRVKALEKMERIAPAHIASPFTFEFRTPDSAPNPMLVMENVRC GYRADDGGEIPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGELRTGRGLTIGYFAQHQLETLREDDSAL AHLARLAPDTREQELRDFLGGFNFSGEMATAPIAPFSGGEKARLALALIIWRKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAACGPAGDADDGAPAVNRKDQKRQ EAEARQRLSQLKKPLQARITKIEKEMERLHAQKAELDAFVADPASYAADQKTRLTEAIRKLGDVNGQLETLEADWLGAQD ELEKIG >Mature_646_residues MIRFNQFSLARGTKPLFDATSFTLNPGEKAGLVGANGAGKSTLFAVLRGELHADAGDFSMPPAWRIAHVSQETPAVERSA LDYTLDGDAALRAIEARIAQASAAHDGAAEADAHAAFADADGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLVIISHDREFLDAVCDVTLHLENRQVKRYGGNYSQFEVLRAQ QLELQQSAYEKQQKTIAHLQSFVDRFKAKASKAKQAQSRVKALEKMERIAPAHIASPFTFEFRTPDSAPNPMLVMENVRC GYRADDGGEIPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGELRTGRGLTIGYFAQHQLETLREDDSAL AHLARLAPDTREQELRDFLGGFNFSGEMATAPIAPFSGGEKARLALALIIWRKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAACGPAGDADDGAPAVNRKDQKRQ EAEARQRLSQLKKPLQARITKIEKEMERLHAQKAELDAFVADPASYAADQKTRLTEAIRKLGDVNGQLETLEADWLGAQD ELEKIG
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=39.3258426966292, Blast_Score=358, Evalue=1e-98, Organism=Homo sapiens, GI10947137, Length=533, Percent_Identity=36.0225140712946, Blast_Score=323, Evalue=3e-88, Organism=Homo sapiens, GI27881506, Length=533, Percent_Identity=36.0225140712946, Blast_Score=323, Evalue=3e-88, Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=34.3119266055046, Blast_Score=264, Evalue=2e-70, Organism=Homo sapiens, GI10947135, Length=545, Percent_Identity=34.3119266055046, Blast_Score=264, Evalue=2e-70, Organism=Homo sapiens, GI153792144, Length=231, Percent_Identity=28.1385281385281, Blast_Score=70, Evalue=9e-12, Organism=Homo sapiens, GI47078218, Length=223, Percent_Identity=27.8026905829596, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI45446740, Length=223, Percent_Identity=27.8026905829596, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI150417984, Length=217, Percent_Identity=29.4930875576037, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1789751, Length=645, Percent_Identity=53.4883720930233, Blast_Score=698, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=36.6729678638941, Blast_Score=340, Evalue=2e-94, Organism=Escherichia coli, GI1787182, Length=545, Percent_Identity=30.0917431192661, Blast_Score=210, Evalue=2e-55, Organism=Escherichia coli, GI2367384, Length=545, Percent_Identity=30.8256880733945, Blast_Score=208, Evalue=7e-55, Organism=Escherichia coli, GI87081782, Length=529, Percent_Identity=25.3308128544423, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1788165, Length=204, Percent_Identity=31.8627450980392, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=31.6582914572864, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17553372, Length=532, Percent_Identity=36.0902255639098, Blast_Score=333, Evalue=2e-91, Organism=Caenorhabditis elegans, GI17555318, Length=530, Percent_Identity=35.0943396226415, Blast_Score=322, Evalue=4e-88, Organism=Caenorhabditis elegans, GI17559834, Length=564, Percent_Identity=32.8014184397163, Blast_Score=300, Evalue=2e-81, Organism=Caenorhabditis elegans, GI71992285, Length=207, Percent_Identity=25.1207729468599, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=556, Percent_Identity=34.3525179856115, Blast_Score=322, Evalue=9e-89, Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=32.7746741154562, Blast_Score=287, Evalue=4e-78, Organism=Saccharomyces cerevisiae, GI6324314, Length=386, Percent_Identity=30.8290155440415, Blast_Score=161, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6325030, Length=391, Percent_Identity=30.9462915601023, Blast_Score=156, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323278, Length=385, Percent_Identity=29.3506493506493, Blast_Score=153, Evalue=9e-38, Organism=Drosophila melanogaster, GI24666836, Length=528, Percent_Identity=38.4469696969697, Blast_Score=374, Evalue=1e-103, Organism=Drosophila melanogaster, GI24642252, Length=551, Percent_Identity=37.7495462794918, Blast_Score=349, Evalue=3e-96, Organism=Drosophila melanogaster, GI18859989, Length=551, Percent_Identity=37.7495462794918, Blast_Score=349, Evalue=3e-96, Organism=Drosophila melanogaster, GI24641342, Length=548, Percent_Identity=34.6715328467153, Blast_Score=309, Evalue=3e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 71015; Mature: 71015
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFNQFSLARGTKPLFDATSFTLNPGEKAGLVGANGAGKSTLFAVLRGELHADAGDFSM CCEECCCHHCCCCCCCCCCCCEEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC PPAWRIAHVSQETPAVERSALDYTLDGDAALRAIEARIAQASAAHDGAAEADAHAAFADA CCCCEEEECCCCCCCHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC DGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL CCCCCCHHHHEEHHCCCHHHHHHHCHHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAIVWLEDWLHRYPGTLVIISHDREFLDAVCDVTLHLENRQVKRYGGNYSQFEVLRAQ CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCEEEEECCCHHHHHCCCHHHHHHHHHH QLELQQSAYEKQQKTIAHLQSFVDRFKAKASKAKQAQSRVKALEKMERIAPAHIASPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEE EFRTPDSAPNPMLVMENVRCGYRADDGGEIPIVERVALSIQNGQRIGLLGANGQGKSTLI EEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHEECCCCEEEEEECCCCCHHHHH KTLAGTLAPLSGELRTGRGLTIGYFAQHQLETLREDDSALAHLARLAPDTREQELRDFLG HHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHC GFNFSGEMATAPIAPFSGGEKARLALALIIWRKPNLLLLDEPTNHLDLETRHALTMALAQ CCCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHH FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAACG HCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PAGDADDGAPAVNRKDQKRQEAEARQRLSQLKKPLQARITKIEKEMERLHAQKAELDAFV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADPASYAADQKTRLTEAIRKLGDVNGQLETLEADWLGAQDELEKIG CCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHCC >Mature Secondary Structure MIRFNQFSLARGTKPLFDATSFTLNPGEKAGLVGANGAGKSTLFAVLRGELHADAGDFSM CCEECCCHHCCCCCCCCCCCCEEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC PPAWRIAHVSQETPAVERSALDYTLDGDAALRAIEARIAQASAAHDGAAEADAHAAFADA CCCCEEEECCCCCCCHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC DGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL CCCCCCHHHHEEHHCCCHHHHHHHCHHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAIVWLEDWLHRYPGTLVIISHDREFLDAVCDVTLHLENRQVKRYGGNYSQFEVLRAQ CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCEEEEECCCHHHHHCCCHHHHHHHHHH QLELQQSAYEKQQKTIAHLQSFVDRFKAKASKAKQAQSRVKALEKMERIAPAHIASPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEE EFRTPDSAPNPMLVMENVRCGYRADDGGEIPIVERVALSIQNGQRIGLLGANGQGKSTLI EEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHEECCCCEEEEEECCCCCHHHHH KTLAGTLAPLSGELRTGRGLTIGYFAQHQLETLREDDSALAHLARLAPDTREQELRDFLG HHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHC GFNFSGEMATAPIAPFSGGEKARLALALIIWRKPNLLLLDEPTNHLDLETRHALTMALAQ CCCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHH FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAACG HCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PAGDADDGAPAVNRKDQKRQEAEARQRLSQLKKPLQARITKIEKEMERLHAQKAELDAFV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADPASYAADQKTRLTEAIRKLGDVNGQLETLEADWLGAQDELEKIG CCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]