| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454736
Identifier: 126454736
GI number: 126454736
Start: 1096114
End: 1096494
Strand: Reverse
Name: 126454736
Synonym: BURPS1106A_1115
Alternate gene names: NA
Gene position: 1096494-1096114 (Counterclockwise)
Preceding gene: 126453096
Following gene: 126454401
Centisome position: 27.49
GC content: 69.29
Gene sequence:
>381_bases ATGAGCCCTGACACCGCCCGCCGATTCGATACCGAATTCGCGCCGCGCATCGCGCGCGCCATCGCCGATTTGCTGAACCA TCGGGCGCACACCGACGTCGTCGGCTACGGCGGCCACGGCCATCCGACGCAGGTGCGGATCGTCGCGCCGCACGCCGAGC ACGTGCACGGCTACGCACACCCGCTGAACCTCGCGCTCACGTGGGACACCGACGAGATCGAACGCCTGATGGAAGCGGAC GGCGCCGCACGCTTCGAGCGCTATCTGGCGGCGCTGCCGCGCAAGCTGGCGGCATGGGAAAACGCGCGCGGCGTCGATTT CGGCTCGCGCACGCAGGCCGACGCGCTCGTACTACTCGGCGGGCTCGATTTCGAGGCATGA
Upstream 100 bases:
>100_bases AATAGATGCAGCAAGGGGGTAACGCGGCATTACGCCTGTTGCGCGCGCTCGCACATGCATGGGCCGTGCTACGATTTTCG GCATAAAGGAGACGCCGTCG
Downstream 100 bases:
>100_bases AAGCGACAGGCAACCACAATGCGAGCCGGGTCGTACGCGTGGCGGCGAGATGCGGCCCGATATGCGGCGACGATGCGATG CACCACGATGCCCCGCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSPDTARRFDTEFAPRIARAIADLLNHRAHTDVVGYGGHGHPTQVRIVAPHAEHVHGYAHPLNLALTWDTDEIERLMEAD GAARFERYLAALPRKLAAWENARGVDFGSRTQADALVLLGGLDFEA
Sequences:
>Translated_126_residues MSPDTARRFDTEFAPRIARAIADLLNHRAHTDVVGYGGHGHPTQVRIVAPHAEHVHGYAHPLNLALTWDTDEIERLMEAD GAARFERYLAALPRKLAAWENARGVDFGSRTQADALVLLGGLDFEA >Mature_125_residues SPDTARRFDTEFAPRIARAIADLLNHRAHTDVVGYGGHGHPTQVRIVAPHAEHVHGYAHPLNLALTWDTDEIERLMEADG AARFERYLAALPRKLAAWENARGVDFGSRTQADALVLLGGLDFEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13906; Mature: 13775
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPDTARRFDTEFAPRIARAIADLLNHRAHTDVVGYGGHGHPTQVRIVAPHAEHVHGYAH CCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCHHHHCCCCC PLNLALTWDTDEIERLMEADGAARFERYLAALPRKLAAWENARGVDFGSRTQADALVLLG CEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE GLDFEA CCCCCC >Mature Secondary Structure SPDTARRFDTEFAPRIARAIADLLNHRAHTDVVGYGGHGHPTQVRIVAPHAEHVHGYAH CCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCHHHHCCCCC PLNLALTWDTDEIERLMEADGAARFERYLAALPRKLAAWENARGVDFGSRTQADALVLLG CEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE GLDFEA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA