| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454716
Identifier: 126454716
GI number: 126454716
Start: 1401936
End: 1402145
Strand: Reverse
Name: 126454716
Synonym: BURPS1106A_1437
Alternate gene names: NA
Gene position: 1402145-1401936 (Counterclockwise)
Preceding gene: 126454427
Following gene: 126452301
Centisome position: 35.16
GC content: 58.1
Gene sequence:
>210_bases ATGCCAGCAACTGACGTCGCAATGGTCGTTCGTCCCGCAAAAGCCGCCGAGCTGCTCGGCATCGGCGTTTCCACTCTCTG GCGTTACACAAAGACCGTCGAAGATTTTCCGAAGCCGGTACGGATCAATTCGCGCGTGTCCGTGTTCGTTCGTGAAGAGC TCGACAACTGGGTCACGAACCGCATCGCCTCCGCTCGAAAAGCGTCGTGA
Upstream 100 bases:
>100_bases CCCCCTTCTAGCAGGGCGACGTCAATTACGAACATCCATAATCGATGGCATCTGAGACGCCACTACGTCTCAGGGAATCA CCAACCCTTGGAGTTTCCAG
Downstream 100 bases:
>100_bases GAGGTGCGCGATGCCAGACAAAAAAAAAGGCGCATTGCCGGAGCACTGCGCCTCAACGATTAGCAACACGAAGAATACCG AAAGCACGTCGCCGACGTTT
Product: prophage CP4-57 regulatory protein (AlpA)
Products: NA
Alternate protein names: Prophage Cp4-57 Regulatory Protein
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MPATDVAMVVRPAKAAELLGIGVSTLWRYTKTVEDFPKPVRINSRVSVFVREELDNWVTNRIASARKAS
Sequences:
>Translated_69_residues MPATDVAMVVRPAKAAELLGIGVSTLWRYTKTVEDFPKPVRINSRVSVFVREELDNWVTNRIASARKAS >Mature_68_residues PATDVAMVVRPAKAAELLGIGVSTLWRYTKTVEDFPKPVRINSRVSVFVREELDNWVTNRIASARKAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7716; Mature: 7585
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATDVAMVVRPAKAAELLGIGVSTLWRYTKTVEDFPKPVRINSRVSVFVREELDNWVTN CCCCCHHHEECCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH RIASARKAS HHHHHCCCC >Mature Secondary Structure PATDVAMVVRPAKAAELLGIGVSTLWRYTKTVEDFPKPVRINSRVSVFVREELDNWVTN CCCCHHHEECCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH RIASARKAS HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA