Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126454716

Identifier: 126454716

GI number: 126454716

Start: 1401936

End: 1402145

Strand: Reverse

Name: 126454716

Synonym: BURPS1106A_1437

Alternate gene names: NA

Gene position: 1402145-1401936 (Counterclockwise)

Preceding gene: 126454427

Following gene: 126452301

Centisome position: 35.16

GC content: 58.1

Gene sequence:

>210_bases
ATGCCAGCAACTGACGTCGCAATGGTCGTTCGTCCCGCAAAAGCCGCCGAGCTGCTCGGCATCGGCGTTTCCACTCTCTG
GCGTTACACAAAGACCGTCGAAGATTTTCCGAAGCCGGTACGGATCAATTCGCGCGTGTCCGTGTTCGTTCGTGAAGAGC
TCGACAACTGGGTCACGAACCGCATCGCCTCCGCTCGAAAAGCGTCGTGA

Upstream 100 bases:

>100_bases
CCCCCTTCTAGCAGGGCGACGTCAATTACGAACATCCATAATCGATGGCATCTGAGACGCCACTACGTCTCAGGGAATCA
CCAACCCTTGGAGTTTCCAG

Downstream 100 bases:

>100_bases
GAGGTGCGCGATGCCAGACAAAAAAAAAGGCGCATTGCCGGAGCACTGCGCCTCAACGATTAGCAACACGAAGAATACCG
AAAGCACGTCGCCGACGTTT

Product: prophage CP4-57 regulatory protein (AlpA)

Products: NA

Alternate protein names: Prophage Cp4-57 Regulatory Protein

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MPATDVAMVVRPAKAAELLGIGVSTLWRYTKTVEDFPKPVRINSRVSVFVREELDNWVTNRIASARKAS

Sequences:

>Translated_69_residues
MPATDVAMVVRPAKAAELLGIGVSTLWRYTKTVEDFPKPVRINSRVSVFVREELDNWVTNRIASARKAS
>Mature_68_residues
PATDVAMVVRPAKAAELLGIGVSTLWRYTKTVEDFPKPVRINSRVSVFVREELDNWVTNRIASARKAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7716; Mature: 7585

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATDVAMVVRPAKAAELLGIGVSTLWRYTKTVEDFPKPVRINSRVSVFVREELDNWVTN
CCCCCHHHEECCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH
RIASARKAS
HHHHHCCCC
>Mature Secondary Structure 
PATDVAMVVRPAKAAELLGIGVSTLWRYTKTVEDFPKPVRINSRVSVFVREELDNWVTN
CCCCHHHEECCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH
RIASARKAS
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA