| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454715
Identifier: 126454715
GI number: 126454715
Start: 974625
End: 975293
Strand: Direct
Name: 126454715
Synonym: BURPS1106A_0994
Alternate gene names: NA
Gene position: 974625-975293 (Clockwise)
Preceding gene: 126452244
Following gene: 126452148
Centisome position: 24.44
GC content: 65.17
Gene sequence:
>669_bases ATGAGCCTCGACTACGGTTTCGTGAAAGCGAAAATCAAAGCGGTTGCGGGTCTGAAAGCGGCGGCGCGCGCGAACGAGAC GCAGTATCACGTTCATCTGACGCTCGCCTTGCCGGACGGCGACTGGGACGTCGCGATCAACGTCGGCACCAACGACGCGG ACGACTTGCTCAAGTACAAGCTCGTCTACGACTTCCATCATCCGGTTACGCAGACGCTCGCCGCGGCGGCGGAGGGCTAC ACCGACCTGACGGGCGGCGATGCGCTGCCGGCGCTCGACTACGTGCGCAGCGACGTGCTGAACGAAACGGGCGGGTGGCG CATGAGCGACGTGATGGACGGCACCGAGCATCCGGAGCCGATTCCGTCGGTGCTGCGGCTCGTCGACGCCGCGCATCAGC AGAACCTCGATCTGTACGTGTTCGGGCGCACGTATGTCGAAGGCAATGGCATTCACGACACGCACATGAACCAGGGATCG TCCGGGCCGCACTTCCTGCATCGGCCGGGTGTCGATACGAACGACCACAACGACGTGTGGCAGGACGGCGCGCTCCTGGT CGATCTCGGCGGCCCGCAATGGGCTGCGTACTTCGCGGCATTCGAGCAGCAGGCGGTGCCGACCGACGGTCTCGGCAATC CGCTGCCGGGCGCCGGGCCGATTTCGTAG
Upstream 100 bases:
>100_bases GCGAGGCGACGTGCGACAGACCGCGTTCGCCGATCGGCCGATCGAAAACCGACACGCAGCTCGGGCACAATGTGCGCGTC ACCCTCGAACGGAGACGCAC
Downstream 100 bases:
>100_bases GCGGGCGCGGCGGGCCGCACGCCGCGCGCGCGGCCCGCCGCGTGCGCGGTTTGCGAGCCGGCACGCCGTGCGGACCGGTC CGCTCGCGCGCCCCCGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSLDYGFVKAKIKAVAGLKAAARANETQYHVHLTLALPDGDWDVAINVGTNDADDLLKYKLVYDFHHPVTQTLAAAAEGY TDLTGGDALPALDYVRSDVLNETGGWRMSDVMDGTEHPEPIPSVLRLVDAAHQQNLDLYVFGRTYVEGNGIHDTHMNQGS SGPHFLHRPGVDTNDHNDVWQDGALLVDLGGPQWAAYFAAFEQQAVPTDGLGNPLPGAGPIS
Sequences:
>Translated_222_residues MSLDYGFVKAKIKAVAGLKAAARANETQYHVHLTLALPDGDWDVAINVGTNDADDLLKYKLVYDFHHPVTQTLAAAAEGY TDLTGGDALPALDYVRSDVLNETGGWRMSDVMDGTEHPEPIPSVLRLVDAAHQQNLDLYVFGRTYVEGNGIHDTHMNQGS SGPHFLHRPGVDTNDHNDVWQDGALLVDLGGPQWAAYFAAFEQQAVPTDGLGNPLPGAGPIS >Mature_221_residues SLDYGFVKAKIKAVAGLKAAARANETQYHVHLTLALPDGDWDVAINVGTNDADDLLKYKLVYDFHHPVTQTLAAAAEGYT DLTGGDALPALDYVRSDVLNETGGWRMSDVMDGTEHPEPIPSVLRLVDAAHQQNLDLYVFGRTYVEGNGIHDTHMNQGSS GPHFLHRPGVDTNDHNDVWQDGALLVDLGGPQWAAYFAAFEQQAVPTDGLGNPLPGAGPIS
Specific function: Unknown
COG id: COG5634
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23928; Mature: 23796
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDYGFVKAKIKAVAGLKAAARANETQYHVHLTLALPDGDWDVAINVGTNDADDLLKYK CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEEECCCCHHHHHEEH LVYDFHHPVTQTLAAAAEGYTDLTGGDALPALDYVRSDVLNETGGWRMSDVMDGTEHPEP EEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCH IPSVLRLVDAAHQQNLDLYVFGRTYVEGNGIHDTHMNQGSSGPHFLHRPGVDTNDHNDVW HHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC QDGALLVDLGGPQWAAYFAAFEQQAVPTDGLGNPLPGAGPIS CCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLDYGFVKAKIKAVAGLKAAARANETQYHVHLTLALPDGDWDVAINVGTNDADDLLKYK CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEEECCCCHHHHHEEH LVYDFHHPVTQTLAAAAEGYTDLTGGDALPALDYVRSDVLNETGGWRMSDVMDGTEHPEP EEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCH IPSVLRLVDAAHQQNLDLYVFGRTYVEGNGIHDTHMNQGSSGPHFLHRPGVDTNDHNDVW HHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC QDGALLVDLGGPQWAAYFAAFEQQAVPTDGLGNPLPGAGPIS CCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA