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The map label for this gene is rcsB [H]

Identifier: 126454700

GI number: 126454700

Start: 1591799

End: 1592431

Strand: Direct

Name: rcsB [H]

Synonym: BURPS1106A_1640

Alternate gene names: 126454700

Gene position: 1591799-1592431 (Clockwise)

Preceding gene: 126452082

Following gene: 126452212

Centisome position: 39.91

GC content: 69.19

Gene sequence:

>633_bases
ATGAGCGTTCAAGTGTTGATCGCGGACGACCATCCGCTCGTGCTGCTGGGCGTGCGCCACATGCTGGCGGGCATGGGCGA
CGTATCGATCGTCGGCGAAGCGCATGACCCGGCGGGGCTGCTCGCGCTGCTCGCGGCCACGCCGTGCGACATCGTCATCA
CCGATTTCGCGATGCCCGAGCAGCCGGCCGCCGACGGCCTCGCGATGCTCACCGCGATCCGCGACGGCTATCCCTCGGTT
CGCGTGATCGTGCTGACGATGCTCGACAATCCGGTGCTGATGCACACGATGCGCCAGGCGGGCGCGCTCGCGGTGCTCAG
CAAGCGCGGCGACCTCGACGAGCTGCCGCGCGCGCTCGCCGCCGTGTACCAGGGGCGGCCGTTCGTCGGCACGCACGCGG
GCGCGGCGGGCGGGGGAGCGATGCGCGGGACCGACGCGCCGCGGCAACTGAGCCCGCGCGAGATCGAGGTGGTGCGGCTA
TGCGCGACCGGGATGACGATGACCGACATCGCGAACCGCTATGGCCGCAGCATCAAGACGGTCAGCACGCACAAGCACAA
CGCGATGGGCAAGCTCGGGCTGAAATCGGACGTCGATCTGTTCATGTACGCGACGGAGAACGGGCTGGTCTGA

Upstream 100 bases:

>100_bases
CGCGACCCGGGACATTCTCGCGATGGTGAACCATCTGCTGCGCTGCGTTGCGCATTCGGCGCAATCGCGCGATCGCGGCG
ATCCAAAAGGAGGAAGGTAA

Downstream 100 bases:

>100_bases
CGCGCCCGTCCGACGCGGGCGAGCCGTGCGATGCGCGTCGCACGCGCGCGGCCGCCCGGTGCTTGCGGCGATGCGTCGCA
CGTCGCGTTCAGGGGCCGGC

Product: capsular synthesis regulator component B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSVQVLIADDHPLVLLGVRHMLAGMGDVSIVGEAHDPAGLLALLAATPCDIVITDFAMPEQPAADGLAMLTAIRDGYPSV
RVIVLTMLDNPVLMHTMRQAGALAVLSKRGDLDELPRALAAVYQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRL
CATGMTMTDIANRYGRSIKTVSTHKHNAMGKLGLKSDVDLFMYATENGLV

Sequences:

>Translated_210_residues
MSVQVLIADDHPLVLLGVRHMLAGMGDVSIVGEAHDPAGLLALLAATPCDIVITDFAMPEQPAADGLAMLTAIRDGYPSV
RVIVLTMLDNPVLMHTMRQAGALAVLSKRGDLDELPRALAAVYQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRL
CATGMTMTDIANRYGRSIKTVSTHKHNAMGKLGLKSDVDLFMYATENGLV
>Mature_209_residues
SVQVLIADDHPLVLLGVRHMLAGMGDVSIVGEAHDPAGLLALLAATPCDIVITDFAMPEQPAADGLAMLTAIRDGYPSVR
VIVLTMLDNPVLMHTMRQAGALAVLSKRGDLDELPRALAAVYQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRLC
ATGMTMTDIANRYGRSIKTVSTHKHNAMGKLGLKSDVDLFMYATENGLV

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=202, Percent_Identity=37.1287128712871, Blast_Score=145, Evalue=1e-36,
Organism=Escherichia coli, GI1786747, Length=202, Percent_Identity=29.2079207920792, Blast_Score=88, Evalue=3e-19,
Organism=Escherichia coli, GI1788222, Length=212, Percent_Identity=29.2452830188679, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1788712, Length=204, Percent_Identity=27.9411764705882, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1790102, Length=198, Percent_Identity=32.3232323232323, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788521, Length=198, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22181; Mature: 22050

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQVLIADDHPLVLLGVRHMLAGMGDVSIVGEAHDPAGLLALLAATPCDIVITDFAMPE
CCEEEEEECCCCEEEEEHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCC
QPAADGLAMLTAIRDGYPSVRVIVLTMLDNPVLMHTMRQAGALAVLSKRGDLDELPRALA
CCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
AVYQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRLCATGMTMTDIANRYGRSIKT
HHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHCCCHHHHHHHHHCCCEEE
VSTHKHNAMGKLGLKSDVDLFMYATENGLV
ECCCCCCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
SVQVLIADDHPLVLLGVRHMLAGMGDVSIVGEAHDPAGLLALLAATPCDIVITDFAMPE
CEEEEEECCCCEEEEEHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCC
QPAADGLAMLTAIRDGYPSVRVIVLTMLDNPVLMHTMRQAGALAVLSKRGDLDELPRALA
CCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
AVYQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRLCATGMTMTDIANRYGRSIKT
HHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHCCCHHHHHHHHHCCCEEE
VSTHKHNAMGKLGLKSDVDLFMYATENGLV
ECCCCCCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]