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The map label for this gene is omp32 [H]

Identifier: 126454597

GI number: 126454597

Start: 279690

End: 280823

Strand: Direct

Name: omp32 [H]

Synonym: BURPS1106A_0302

Alternate gene names: 126454597

Gene position: 279690-280823 (Clockwise)

Preceding gene: 126451489

Following gene: 126451794

Centisome position: 7.01

GC content: 64.99

Gene sequence:

>1134_bases
ATGAAGCAAACCACCAAAATCACGGGACTGATAGGAGGGGCCGTGCTGGCGATCGCAGGCCAGCAGGCGATGGCGCAAAG
CTCGGTGACCCTCTGGGGCGTCGCGGACGTGAGCCTGCGTTACCTGAGCAACTCGAACGCGCAGAACGACGGCCGCTTTT
TCATGACGAACGGCGCGATCACCAACAGCCGCATCGGCCTGCACGGCAGCGAAGACCTGGGCGGCGGCCTGAAGGCGATC
TTCAATCTCGAAAGCGGCGTCAATCTGCAGGACGGCGCGTTCTCGGACAGCAAGCGCATCTTCAATCGCGCCGCCTATGT
CGGCCTGACGAGCCAGTACGGCACCGTGACGCTCGGCCGGCAGAAGACGGTGCTGTTCGATCTGCTGAGCGACACGTACG
ATCCGCTGACGGTCGGCAACTATCTGGAAAACGCGTGGCTGCCCGTCGCGCTCGGCGCGGGCCTGTACGCGGACAACTCG
GTCAAGTATCGCGGCACGTTCGGTGGCCTGACGATCGGCGCGATGTACTCGTTCGGCACGGATTCGACCGCCACGGGCGC
GGGCGGCTTCTCCGGCCAGCTTCCCGGCCACATGGGCGCGGGCAACATGTACGGCTTCTCGCTGTCGTACGTGGCGGGGC
CCGTGAGCGTGGCGGCGGGCGTGCAGCAGAACAGCGACAATTCGAACCGCAAGCAGACGATCTATCACGCGAACGTCGTC
TACGCGTTCAGCAAGGCGAAGATCTACGCGGGCTATCTGCATTCGAAGGACGATACGGGCTTCGTCGATACGGTGCTCGC
GCAGCAGCCGGGGCTCTTCACGAGCGGCGCGCCCAAGCGCACCGGTCGGATCGACGACGGCCCGTTCGCCGGCGTGAGCT
GGCAGGCGACGCCCGCGCTCACGCTGACGGGCGCGTTCTACTATGACCGGATGCGCAACGCGACGATCGCGAATGGCCAG
CTCGACAGCGGCAATCGCTATACGGTCGTCGGCCTCGTCGAGTATGCGTTGTCGAAACGCACCGAGATCTACGGCACCGT
CGACTTCAACAAGGTGAACGGGGCGGCGACGGTCGAGATGCCGGGCCGCAGCAACCAGACGGGCGTCGCGATCGGTCTGC
GCAACATCTTCTGA

Upstream 100 bases:

>100_bases
AGCTTTCATCGTCATATGATTCGTGGGCTCGCCGCGCGCGGCGGCATCGGCCGCGGCCGTGGCCGGAGAAGAGACGGAGA
CAATTCACAAAGGAAAGCTC

Downstream 100 bases:

>100_bases
GCGTCGCGGCATCGCGCGATTCAGATGGCAAGGCCCGCTTCGCGCGGGCCTTGTTCATGGCGGCGCGCCGCCGGCGCGTG
CGCCGGTGCCGGTGCGCATC

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKQTTKITGLIGGAVLAIAGQQAMAQSSVTLWGVADVSLRYLSNSNAQNDGRFFMTNGAITNSRIGLHGSEDLGGGLKAI
FNLESGVNLQDGAFSDSKRIFNRAAYVGLTSQYGTVTLGRQKTVLFDLLSDTYDPLTVGNYLENAWLPVALGAGLYADNS
VKYRGTFGGLTIGAMYSFGTDSTATGAGGFSGQLPGHMGAGNMYGFSLSYVAGPVSVAAGVQQNSDNSNRKQTIYHANVV
YAFSKAKIYAGYLHSKDDTGFVDTVLAQQPGLFTSGAPKRTGRIDDGPFAGVSWQATPALTLTGAFYYDRMRNATIANGQ
LDSGNRYTVVGLVEYALSKRTEIYGTVDFNKVNGAATVEMPGRSNQTGVAIGLRNIF

Sequences:

>Translated_377_residues
MKQTTKITGLIGGAVLAIAGQQAMAQSSVTLWGVADVSLRYLSNSNAQNDGRFFMTNGAITNSRIGLHGSEDLGGGLKAI
FNLESGVNLQDGAFSDSKRIFNRAAYVGLTSQYGTVTLGRQKTVLFDLLSDTYDPLTVGNYLENAWLPVALGAGLYADNS
VKYRGTFGGLTIGAMYSFGTDSTATGAGGFSGQLPGHMGAGNMYGFSLSYVAGPVSVAAGVQQNSDNSNRKQTIYHANVV
YAFSKAKIYAGYLHSKDDTGFVDTVLAQQPGLFTSGAPKRTGRIDDGPFAGVSWQATPALTLTGAFYYDRMRNATIANGQ
LDSGNRYTVVGLVEYALSKRTEIYGTVDFNKVNGAATVEMPGRSNQTGVAIGLRNIF
>Mature_377_residues
MKQTTKITGLIGGAVLAIAGQQAMAQSSVTLWGVADVSLRYLSNSNAQNDGRFFMTNGAITNSRIGLHGSEDLGGGLKAI
FNLESGVNLQDGAFSDSKRIFNRAAYVGLTSQYGTVTLGRQKTVLFDLLSDTYDPLTVGNYLENAWLPVALGAGLYADNS
VKYRGTFGGLTIGAMYSFGTDSTATGAGGFSGQLPGHMGAGNMYGFSLSYVAGPVSVAAGVQQNSDNSNRKQTIYHANVV
YAFSKAKIYAGYLHSKDDTGFVDTVLAQQPGLFTSGAPKRTGRIDDGPFAGVSWQATPALTLTGAFYYDRMRNATIANGQ
LDSGNRYTVVGLVEYALSKRTEIYGTVDFNKVNGAATVEMPGRSNQTGVAIGLRNIF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39830; Mature: 39830

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTTKITGLIGGAVLAIAGQQAMAQSSVTLWGVADVSLRYLSNSNAQNDGRFFMTNGAI
CCCCEEEEHHHCCEEEEECCCHHHHHCCEEEEEEECEEEEEECCCCCCCCCEEEEECCCE
TNSRIGLHGSEDLGGGLKAIFNLESGVNLQDGAFSDSKRIFNRAAYVGLTSQYGTVTLGR
ECCEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCEEEECC
QKTVLFDLLSDTYDPLTVGNYLENAWLPVALGAGLYADNSVKYRGTFGGLTIGAMYSFGT
CHHHHHHHHHCCCCCCCHHHHHHCCCEEEEECCCEEECCCEEEEECCCCEEEEEEEECCC
DSTATGAGGFSGQLPGHMGAGNMYGFSLSYVAGPVSVAAGVQQNSDNSNRKQTIYHANVV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCHHHHHCCCCCCCCCCCEEEEEEEEEE
YAFSKAKIYAGYLHSKDDTGFVDTVLAQQPGLFTSGAPKRTGRIDDGPFAGVSWQATPAL
EEEECCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCE
TLTGAFYYDRMRNATIANGQLDSGNRYTVVGLVEYALSKRTEIYGTVDFNKVNGAATVEM
EEEEHHHHHHHCCCEEECCCCCCCCEEEEEEEHHHHHCCCCEEEEEEEEEECCCEEEEEE
PGRSNQTGVAIGLRNIF
CCCCCCCEEEEEEECCC
>Mature Secondary Structure
MKQTTKITGLIGGAVLAIAGQQAMAQSSVTLWGVADVSLRYLSNSNAQNDGRFFMTNGAI
CCCCEEEEHHHCCEEEEECCCHHHHHCCEEEEEEECEEEEEECCCCCCCCCEEEEECCCE
TNSRIGLHGSEDLGGGLKAIFNLESGVNLQDGAFSDSKRIFNRAAYVGLTSQYGTVTLGR
ECCEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCEEEECC
QKTVLFDLLSDTYDPLTVGNYLENAWLPVALGAGLYADNSVKYRGTFGGLTIGAMYSFGT
CHHHHHHHHHCCCCCCCHHHHHHCCCEEEEECCCEEECCCEEEEECCCCEEEEEEEECCC
DSTATGAGGFSGQLPGHMGAGNMYGFSLSYVAGPVSVAAGVQQNSDNSNRKQTIYHANVV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCHHHHHCCCCCCCCCCCEEEEEEEEEE
YAFSKAKIYAGYLHSKDDTGFVDTVLAQQPGLFTSGAPKRTGRIDDGPFAGVSWQATPAL
EEEECCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCE
TLTGAFYYDRMRNATIANGQLDSGNRYTVVGLVEYALSKRTEIYGTVDFNKVNGAATVEM
EEEEHHHHHHHCCCEEECCCCCCCCEEEEEEEHHHHHCCCCEEEEEEEEEECCCEEEEEE
PGRSNQTGVAIGLRNIF
CCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]