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The map label for this gene is fliS [H]

Identifier: 126454587

GI number: 126454587

Start: 221756

End: 222190

Strand: Direct

Name: fliS [H]

Synonym: BURPS1106A_0236

Alternate gene names: 126454587

Gene position: 221756-222190 (Clockwise)

Preceding gene: 126453483

Following gene: 126454593

Centisome position: 5.56

GC content: 66.67

Gene sequence:

>435_bases
ATGTTTACCCCAGGCCACGCGGGAGCCAGTGCCTATGCGCGCGTTGGCGTCGAAACCGGGGTGATGGGCGCGTCTCCCCA
CCGGCTCATCGCGATGCTGTACCAGGGCGCGCGCCAGGCGATCGCGCATGCGCGGCTGCATCTGCAGCAGGGCAACGTCG
CCGCGCGCGGCGAGGCGATCGGCAAGGCGATCCGCATCGTCGAGAGCGGTCTTCAGCAGGCGCTGAATCTCGAAGTGGGC
GGCGATATCGCTTCGCGCCTCGATTCGCTCTATACCTATATGTGTCGGCGTCTGCTGCAGGCGAACGTCGACGCGAGCGA
GCCGATGCTGATCGAGGTCGACGGCCTGCTCGCGACGCTCGAGGATGCATGGACGGGCATTGCCCCGGAAGTGGCCAGGA
TGAACGCCCAGGCGGTGACGGAACAGGCTCGATGA

Upstream 100 bases:

>100_bases
AAGCTTTCGGGCTTCCTTACCGATAACGTCGGTACAAGCTCGCGCCGTGCCGCGCACGGTGCGATGTATCGATTCGAATG
CACCAAAGAGGAGGAACGCC

Downstream 100 bases:

>100_bases
ACCGGAAGGACGAATACTTTGCCCGCTACGAAGCGATCGCCGCAGTGTCCGGGCGGATGCTCGTCGCGGCCCGCGATGCG
GCATGGCACGCGATGGGCGG

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MFTPGHAGASAYARVGVETGVMGASPHRLIAMLYQGARQAIAHARLHLQQGNVAARGEAIGKAIRIVESGLQQALNLEVG
GDIASRLDSLYTYMCRRLLQANVDASEPMLIEVDGLLATLEDAWTGIAPEVARMNAQAVTEQAR

Sequences:

>Translated_144_residues
MFTPGHAGASAYARVGVETGVMGASPHRLIAMLYQGARQAIAHARLHLQQGNVAARGEAIGKAIRIVESGLQQALNLEVG
GDIASRLDSLYTYMCRRLLQANVDASEPMLIEVDGLLATLEDAWTGIAPEVARMNAQAVTEQAR
>Mature_144_residues
MFTPGHAGASAYARVGVETGVMGASPHRLIAMLYQGARQAIAHARLHLQQGNVAARGEAIGKAIRIVESGLQQALNLEVG
GDIASRLDSLYTYMCRRLLQANVDASEPMLIEVDGLLATLEDAWTGIAPEVARMNAQAVTEQAR

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=117, Percent_Identity=41.025641025641, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 15324; Mature: 15324

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTPGHAGASAYARVGVETGVMGASPHRLIAMLYQGARQAIAHARLHLQQGNVAARGEAI
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GKAIRIVESGLQQALNLEVGGDIASRLDSLYTYMCRRLLQANVDASEPMLIEVDGLLATL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHH
EDAWTGIAPEVARMNAQAVTEQAR
HHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFTPGHAGASAYARVGVETGVMGASPHRLIAMLYQGARQAIAHARLHLQQGNVAARGEAI
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GKAIRIVESGLQQALNLEVGGDIASRLDSLYTYMCRRLLQANVDASEPMLIEVDGLLATL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHH
EDAWTGIAPEVARMNAQAVTEQAR
HHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]