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The map label for this gene is omp32 [H]

Identifier: 126454572

GI number: 126454572

Start: 2344727

End: 2345794

Strand: Direct

Name: omp32 [H]

Synonym: BURPS1106A_2373

Alternate gene names: 126454572

Gene position: 2344727-2345794 (Clockwise)

Preceding gene: 126452807

Following gene: 126453682

Centisome position: 58.79

GC content: 70.32

Gene sequence:

>1068_bases
ATGACAACGCTCAGGCTCAGGAGTCCGCACCGATGCCGCCCGCCCGCGCTCGCCGCCGCCGCGACGCTCGCCGCGCTGTC
CGGCCCGGCGCACGCGCAGTCGACGCTCACGCTCTACGGCGTGGCCGACGCGGGCGTGCAATATCTGTCGCGCGCCGACG
GCCGACACGCCGCCTGGCGATTGCAAAACTACGGAATCCTGCCTTCCCAGCTCGGCATCAAGGGCGAAGAGGATCTCGGC
GGCGGCTGGCGCGCGCGCTTCCAGCTCGAGCAGGGCATCAACCTGAACGACGGCACGGCGACCGTGCCCGGCTATGCGTT
CTTTCGCGGCGCGTACGTCGGCATGGGCGGCCCGGCCGGCACCGTCACGCTCGGCCGTCAGTTCAGCACACTGTTCGACA
AGACGCTCTTCTACGATCCGCTCTGGTACGCGTCGTACAGCGGCCAGGGCGTGCTCGTGCCGCTGTCCGCGAACTTCGTC
GATCACTCGATCAAGTTCCAGTCGGCGACGTTCGCGGGCTTCGACGTCGAGGCGCTCGCCGCGATGGCCGGTATCGCGGG
TAACACGCGCGCCGGCCGCGTGCTCGAGCTGGGCGGCCAGTTCACGAGCCGCGGCCTGTCGGCGAGCGCCGTGCTGCATC
GCTCGCACGGCACGGCGCAAGGCGGCGCCGATCGCTCCGCGCAGCGGCGCGACATCGGCACGTTCGCCGCGCGTTACGCG
TTCGCCTCGCTGCCGCTCACCGTCCACGCCGGCGTCCAGCGCCTGACGGGCGAGCTCGATCCGGCCCGCACGATCGTCTG
GGGCGGCGCGCGCTATCAGGCAAGCGGACGCTTCGGCTTCGCGGGCGGCATTTACCACACCGATTCGCCGACGCCGCAGG
TCGGCCACCCGACGCTGTTCATCGCGAGCACGACGTGCTCGCTGTCGAAGCGCACCGTCGCGTACCTGAACCTCGGCTAC
GCGAAGAACAGCGGCCGAAGCGCGCAGACCGTCTACGAGTACGACCCGACGCCGCTCGCCGGCGCATCGCAGTTCGGCGC
GATGCTCGGCATGTATCACGTTTTCTGA

Upstream 100 bases:

>100_bases
CCCGCACCGTTCATCTGCATGGCTTTGCAGCGGCTTTGCCGCCACCGACACTGCGCACGCCCCGTCGAAAACGACATCAC
CGGTTTGGAGAAACGAAGCG

Downstream 100 bases:

>100_bases
ATCGAGCCCGCGAGATCACGACCATGACCATCAAGACATTGCGGCAAGAACCCGTGCTGGCGGGCGCGGCATCGCCCGCC
GATACGCCCGCTTTCACGAG

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MTTLRLRSPHRCRPPALAAAATLAALSGPAHAQSTLTLYGVADAGVQYLSRADGRHAAWRLQNYGILPSQLGIKGEEDLG
GGWRARFQLEQGINLNDGTATVPGYAFFRGAYVGMGGPAGTVTLGRQFSTLFDKTLFYDPLWYASYSGQGVLVPLSANFV
DHSIKFQSATFAGFDVEALAAMAGIAGNTRAGRVLELGGQFTSRGLSASAVLHRSHGTAQGGADRSAQRRDIGTFAARYA
FASLPLTVHAGVQRLTGELDPARTIVWGGARYQASGRFGFAGGIYHTDSPTPQVGHPTLFIASTTCSLSKRTVAYLNLGY
AKNSGRSAQTVYEYDPTPLAGASQFGAMLGMYHVF

Sequences:

>Translated_355_residues
MTTLRLRSPHRCRPPALAAAATLAALSGPAHAQSTLTLYGVADAGVQYLSRADGRHAAWRLQNYGILPSQLGIKGEEDLG
GGWRARFQLEQGINLNDGTATVPGYAFFRGAYVGMGGPAGTVTLGRQFSTLFDKTLFYDPLWYASYSGQGVLVPLSANFV
DHSIKFQSATFAGFDVEALAAMAGIAGNTRAGRVLELGGQFTSRGLSASAVLHRSHGTAQGGADRSAQRRDIGTFAARYA
FASLPLTVHAGVQRLTGELDPARTIVWGGARYQASGRFGFAGGIYHTDSPTPQVGHPTLFIASTTCSLSKRTVAYLNLGY
AKNSGRSAQTVYEYDPTPLAGASQFGAMLGMYHVF
>Mature_354_residues
TTLRLRSPHRCRPPALAAAATLAALSGPAHAQSTLTLYGVADAGVQYLSRADGRHAAWRLQNYGILPSQLGIKGEEDLGG
GWRARFQLEQGINLNDGTATVPGYAFFRGAYVGMGGPAGTVTLGRQFSTLFDKTLFYDPLWYASYSGQGVLVPLSANFVD
HSIKFQSATFAGFDVEALAAMAGIAGNTRAGRVLELGGQFTSRGLSASAVLHRSHGTAQGGADRSAQRRDIGTFAARYAF
ASLPLTVHAGVQRLTGELDPARTIVWGGARYQASGRFGFAGGIYHTDSPTPQVGHPTLFIASTTCSLSKRTVAYLNLGYA
KNSGRSAQTVYEYDPTPLAGASQFGAMLGMYHVF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37582; Mature: 37451

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLRLRSPHRCRPPALAAAATLAALSGPAHAQSTLTLYGVADAGVQYLSRADGRHAAWR
CCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCEEEE
LQNYGILPSQLGIKGEEDLGGGWRARFQLEQGINLNDGTATVPGYAFFRGAYVGMGGPAG
ECCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHCEEEECCCCCC
TVTLGRQFSTLFDKTLFYDPLWYASYSGQGVLVPLSANFVDHSIKFQSATFAGFDVEALA
EEEECHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCEEEECCCEECCCCHHHHH
AMAGIAGNTRAGRVLELGGQFTSRGLSASAVLHRSHGTAQGGADRSAQRRDIGTFAARYA
HHHCCCCCCCCCEEEEECCCHHHCCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
FASLPLTVHAGVQRLTGELDPARTIVWGGARYQASGRFGFAGGIYHTDSPTPQVGHPTLF
HHCCCEEEHHHHHHHHCCCCCCCEEEECCEEEECCCCEEEECCEEECCCCCCCCCCCEEE
IASTTCSLSKRTVAYLNLGYAKNSGRSAQTVYEYDPTPLAGASQFGAMLGMYHVF
EEEEECCCCCCEEEEEEECEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTLRLRSPHRCRPPALAAAATLAALSGPAHAQSTLTLYGVADAGVQYLSRADGRHAAWR
CEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCEEEE
LQNYGILPSQLGIKGEEDLGGGWRARFQLEQGINLNDGTATVPGYAFFRGAYVGMGGPAG
ECCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHCEEEECCCCCC
TVTLGRQFSTLFDKTLFYDPLWYASYSGQGVLVPLSANFVDHSIKFQSATFAGFDVEALA
EEEECHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCEEEECCCEECCCCHHHHH
AMAGIAGNTRAGRVLELGGQFTSRGLSASAVLHRSHGTAQGGADRSAQRRDIGTFAARYA
HHHCCCCCCCCCEEEEECCCHHHCCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
FASLPLTVHAGVQRLTGELDPARTIVWGGARYQASGRFGFAGGIYHTDSPTPQVGHPTLF
HHCCCEEEHHHHHHHHCCCCCCCEEEECCEEEECCCCEEEECCEEECCCCCCCCCCCEEE
IASTTCSLSKRTVAYLNLGYAKNSGRSAQTVYEYDPTPLAGASQFGAMLGMYHVF
EEEEECCCCCCEEEEEEECEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]