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The map label for this gene is gspJ

Identifier: 126454552

GI number: 126454552

Start: 15481

End: 16209

Strand: Direct

Name: gspJ

Synonym: BURPS1106A_0015

Alternate gene names: NA

Gene position: 15481-16209 (Clockwise)

Preceding gene: 126455288

Following gene: 126452956

Centisome position: 0.39

GC content: 72.02

Gene sequence:

>729_bases
ATGAAACCAGCCGTCCGCTCTGAGCGCCGCGCGCCCGGCGAGAAACGCCCGCGGCGGGCGCGCCGCGCCTTCCGGCGAGG
CGCGCGCCACGGCGCGCGCGGCTTCACGCTGATCGAAATGATGATCGCGATCACGATTCTCGCGGTGATCGCGATCCTGT
CGTGGCGCGGGCTCGACCAGATCATCCGCGGCCGCGAGAAGGTGGCGGCCGCGATGGAGGACGAGCGCGTGTTCGCGCAG
ATGTTCGACCAGATGCGCATCGACGCGCGGCGCGCGGCGACCGACGACGAAGCGGGCCAGCCCGCGGTGCGCGTCGCGGG
CGACACGCTGCAGATCGTGCGCGAGTTCGACGCGCCGGGCGCGGCGCCGCGCCTGCAGGTCGTGCGCTACCGGATTTCGA
ACGGGCGCGTCGTGCGTTACGCGTCGCCGCCGATCGGCGACGTCAACGCGCTGCGCGACGCGCTGCGCGGCGGCGATACC
GAAGGCTGGAGCGAGGTGGCGCTGATGCGCGGCGTCGGCATGATCAACGCGCGGCTGTACGTGCCGAAGGTCGGCTGGAC
GACCAGCATGCCGGACGCCGACAACGCGCTCGAGCAGAACAACAACGCGCTCAAGGTGCCGATGCTCGGCAACGCGCCGC
CGCCGCGCGCGGTGACGGGGCTCGAGGTGAGCATCGGCGCGACGTCGCTGCGCGTGCCGATCACGCGCATTTTCCTGATC
GGGGAGTGA

Upstream 100 bases:

>100_bases
GTGAGCTCGACGCCGAATCCCGTGTTCAGGCGCGTCGAGATCGCGGTGTCGATGAACGGACGGGCCGGCGTGCTCGCGCA
GATGGTGACGGTGGTCGCGA

Downstream 100 bases:

>100_bases
CATGCGCGCCTTCGCCCTCCTCGCTCGCTTCGCCTCGCCCGGCCGCCCGCGCGCGGCGCTCGGTCCGCATGCGCCGGACG
CCGCGCAGCCGGCGCCGGCG

Product: general secretion pathway protein J

Products: NA

Alternate protein names: Type II Secretory Pathway Component PulJ; General Secretion Pathway Protein J; Type II Secretion System Protein J

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKPAVRSERRAPGEKRPRRARRAFRRGARHGARGFTLIEMMIAITILAVIAILSWRGLDQIIRGREKVAAAMEDERVFAQ
MFDQMRIDARRAATDDEAGQPAVRVAGDTLQIVREFDAPGAAPRLQVVRYRISNGRVVRYASPPIGDVNALRDALRGGDT
EGWSEVALMRGVGMINARLYVPKVGWTTSMPDADNALEQNNNALKVPMLGNAPPPRAVTGLEVSIGATSLRVPITRIFLI
GE

Sequences:

>Translated_242_residues
MKPAVRSERRAPGEKRPRRARRAFRRGARHGARGFTLIEMMIAITILAVIAILSWRGLDQIIRGREKVAAAMEDERVFAQ
MFDQMRIDARRAATDDEAGQPAVRVAGDTLQIVREFDAPGAAPRLQVVRYRISNGRVVRYASPPIGDVNALRDALRGGDT
EGWSEVALMRGVGMINARLYVPKVGWTTSMPDADNALEQNNNALKVPMLGNAPPPRAVTGLEVSIGATSLRVPITRIFLI
GE
>Mature_242_residues
MKPAVRSERRAPGEKRPRRARRAFRRGARHGARGFTLIEMMIAITILAVIAILSWRGLDQIIRGREKVAAAMEDERVFAQ
MFDQMRIDARRAATDDEAGQPAVRVAGDTLQIVREFDAPGAAPRLQVVRYRISNGRVVRYASPPIGDVNALRDALRGGDT
EGWSEVALMRGVGMINARLYVPKVGWTTSMPDADNALEQNNNALKVPMLGNAPPPRAVTGLEVSIGATSLRVPITRIFLI
GE

Specific function: Unknown

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26603; Mature: 26603

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAVRSERRAPGEKRPRRARRAFRRGARHGARGFTLIEMMIAITILAVIAILSWRGLDQ
CCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
IIRGREKVAAAMEDERVFAQMFDQMRIDARRAATDDEAGQPAVRVAGDTLQIVREFDAPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCCC
AAPRLQVVRYRISNGRVVRYASPPIGDVNALRDALRGGDTEGWSEVALMRGVGMINARLY
CCCHHEEEEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEE
VPKVGWTTSMPDADNALEQNNNALKVPMLGNAPPPRAVTGLEVSIGATSLRVPITRIFLI
ECCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEECCEEEEEEE
GE
CC
>Mature Secondary Structure
MKPAVRSERRAPGEKRPRRARRAFRRGARHGARGFTLIEMMIAITILAVIAILSWRGLDQ
CCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
IIRGREKVAAAMEDERVFAQMFDQMRIDARRAATDDEAGQPAVRVAGDTLQIVREFDAPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCCC
AAPRLQVVRYRISNGRVVRYASPPIGDVNALRDALRGGDTEGWSEVALMRGVGMINARLY
CCCHHEEEEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEE
VPKVGWTTSMPDADNALEQNNNALKVPMLGNAPPPRAVTGLEVSIGATSLRVPITRIFLI
ECCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEECCEEEEEEE
GE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA