| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454546
Identifier: 126454546
GI number: 126454546
Start: 1180294
End: 1180611
Strand: Direct
Name: 126454546
Synonym: BURPS1106A_1200
Alternate gene names: NA
Gene position: 1180294-1180611 (Clockwise)
Preceding gene: 126455436
Following gene: 126454058
Centisome position: 29.59
GC content: 74.53
Gene sequence:
>318_bases TTGGCCGCCGCGCGGACATCGCGGGCGGCGCGCACGCAGCATCGCGCGGCGGCCGCCGCGCGGATGGCCGGCTTCGGCGG CCCGGCGGCGCGGATCGCCGATGCCCGGCCGTTGGCCGAACCGTTTCGCGAGGGATGCTACAATATCGCCCTTTCTGCCG GCGCTCCTGCCGGACGAAGCCTCGCGCGCGGCCCGGATGGCCTCAAGCGCCGGCGGCGCCCTGCGGCGCGCCGCGGCTTC ATGTTCATTCCGAAGTGGGTTGCGCCGTCTGTCTCGCGAGCGAGCAGGCCGTGCTGGATGTCCCGCCGCGCCTTTTGA
Upstream 100 bases:
>100_bases CGAAGAAGGGCGGAGGGAAGCGGAGAGGGGCGGAGAGGGGCGGAGAGGGGCGGAGAGGGGGCGCGATCGGGCGCCGCCGT CGGATCGGCGATGCGCCGCA
Downstream 100 bases:
>100_bases GCGAAACGCCACCATGTCCGATTCTGTTGCCAAGCCTGTCGACGCGACGTTCGATCAATTCGGCCTTGCCGCCGAGATCC TGAAGGCGATTGCCGAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MAAARTSRAARTQHRAAAAARMAGFGGPAARIADARPLAEPFREGCYNIALSAGAPAGRSLARGPDGLKRRRRPAARRGF MFIPKWVAPSVSRASRPCWMSRRAF
Sequences:
>Translated_105_residues MAAARTSRAARTQHRAAAAARMAGFGGPAARIADARPLAEPFREGCYNIALSAGAPAGRSLARGPDGLKRRRRPAARRGF MFIPKWVAPSVSRASRPCWMSRRAF >Mature_104_residues AAARTSRAARTQHRAAAAARMAGFGGPAARIADARPLAEPFREGCYNIALSAGAPAGRSLARGPDGLKRRRRPAARRGFM FIPKWVAPSVSRASRPCWMSRRAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11306; Mature: 11175
Theoretical pI: Translated: 12.68; Mature: 12.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAARTSRAARTQHRAAAAARMAGFGGPAARIADARPLAEPFREGCYNIALSAGAPAGRS CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC LARGPDGLKRRRRPAARRGFMFIPKWVAPSVSRASRPCWMSRRAF CCCCCHHHHHHCCHHHHCCCEECCHHHCCCCHHCCCCCCCCCCCC >Mature Secondary Structure AAARTSRAARTQHRAAAAARMAGFGGPAARIADARPLAEPFREGCYNIALSAGAPAGRS CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC LARGPDGLKRRRRPAARRGFMFIPKWVAPSVSRASRPCWMSRRAF CCCCCHHHHHHCCHHHHCCCEECCHHHCCCCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA