Click here to switch to the map view.

The map label for this gene is 126454512

Identifier: 126454512

GI number: 126454512

Start: 1142409

End: 1142867

Strand: Reverse

Name: 126454512

Synonym: BURPS1106A_1162

Alternate gene names: NA

Gene position: 1142867-1142409 (Counterclockwise)

Preceding gene: 126455457

Following gene: 126452320

Centisome position: 28.65

GC content: 65.36

Gene sequence:

>459_bases
ATGGCAAACGTCTACGACAAACTGAAGGAACTCGGCATCGAGCTGCCCGTCGCGGGTGCACCCGCCGCCGCCTACGTGAT
GAGCGCGCAAAGCGGCAACACCGTCTATCTGTCGGGCCATATCGCGAAGAAGGACGGCAAGGTGTGGGCCGGCAAGCTCG
GCCTCGACGTGACGACCGAGCAAGGCAAGCTGGCCGCGCGCGCGGTCGCGATCGACCTGCTCGCGACGCTGCACGCGCAC
ACGGGCGACTTGAACAAGGTCAAGCGCATCGTCAAGGTGATGAGCCTCGTGAACTCGACGCTCGAGTTCACCGAGCAGCA
CATCGTGACGAACGGCGCATCGGAGCTGATCGCGGAAGTCTTCGGCGACGCGGGCAAGCACGCGCGCTCGGCGTTCGGCG
TCGCGCAGATTCCGCTCGGCGCGTGCGTCGAGATCGAGCTGATCGCCGAACTCGCGTAA

Upstream 100 bases:

>100_bases
GCGCGGCTCGGCAAGCTGTTGCGCGAGCGCCTGTGACGCGCCTCGTTCGCTCACGCATTCACGATTGACTCACTCACGAA
CTCACGAGGATATGAATCAG

Downstream 100 bases:

>100_bases
CGCGATGGCCGCCGCCCGCCGCGCCGCGCACACGGTGCGCTTCAAGCAGGTCGACGTGTTCACGTCGGTGCCGTTCAAGG
GCAATCCGCTCGCCGTCGTA

Product: putative endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-Psp; Translation Initiation Inhibitor YjgF Family; Endoribonuclease; Transcriptional Regulator; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MANVYDKLKELGIELPVAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGLDVTTEQGKLAARAVAIDLLATLHAH
TGDLNKVKRIVKVMSLVNSTLEFTEQHIVTNGASELIAEVFGDAGKHARSAFGVAQIPLGACVEIELIAELA

Sequences:

>Translated_152_residues
MANVYDKLKELGIELPVAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGLDVTTEQGKLAARAVAIDLLATLHAH
TGDLNKVKRIVKVMSLVNSTLEFTEQHIVTNGASELIAEVFGDAGKHARSAFGVAQIPLGACVEIELIAELA
>Mature_151_residues
ANVYDKLKELGIELPVAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGLDVTTEQGKLAARAVAIDLLATLHAHT
GDLNKVKRIVKVMSLVNSTLEFTEQHIVTNGASELIAEVFGDAGKHARSAFGVAQIPLGACVEIELIAELA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15905; Mature: 15773

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVYDKLKELGIELPVAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGLDVTTE
CCCHHHHHHHCCCCCCCCCCCHHHHEEECCCCCEEEEEEEEECCCCCEEEEEECCEEECC
QGKLAARAVAIDLLATLHAHTGDLNKVKRIVKVMSLVNSTLEFTEQHIVTNGASELIAEV
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FGDAGKHARSAFGVAQIPLGACVEIELIAELA
HCCCCHHHHHHCCHHCCCCCCEEHHHEEEECC
>Mature Secondary Structure 
ANVYDKLKELGIELPVAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGLDVTTE
CCHHHHHHHCCCCCCCCCCCHHHHEEECCCCCEEEEEEEEECCCCCEEEEEECCEEECC
QGKLAARAVAIDLLATLHAHTGDLNKVKRIVKVMSLVNSTLEFTEQHIVTNGASELIAEV
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FGDAGKHARSAFGVAQIPLGACVEIELIAELA
HCCCCHHHHHHCCHHCCCCCCEEHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA