Click here to switch to the map view.

The map label for this gene is ygaY [H]

Identifier: 126454500

GI number: 126454500

Start: 3372159

End: 3373358

Strand: Direct

Name: ygaY [H]

Synonym: BURPS1106A_3465

Alternate gene names: 126454500

Gene position: 3372159-3373358 (Clockwise)

Preceding gene: 126454570

Following gene: 126453381

Centisome position: 84.55

GC content: 71.58

Gene sequence:

>1200_bases
ATGAATTCCGTCACCGCTCCCTCCCCCGCGCTGACGCGCGGGATGACGCTGCTGTTCGCGTGCGCCTGCGGCATCGTCAT
CGGCAACCTCTATTATTCGCAACCGCTTCTCGCGGCGATCGCGGCGAGCTTCGGGCGCCAACCCGCCGAGCTCGGCTATC
TCGTCACGCTGACGCAGCTCGGCTACGCGGCGAGCCTCCTCGTCGTCGTGCCGCTCGGCGACGTCGTCAATCGCCATACG
CTGATCGTGCGGCTGCTTGTCGCCAATGTCGTCGCGCTCGTCGCGGTGGCGTCGAGCACGCGCTACGGCTTTTTCGTCGC
GGCGAACATGTGCGTCGGCTTCGTCACGTGCTCGACGCAACTGCTCGTGCCGTTCGCCGCGTCGCTCGCCGACGACGGGG
CGCGCGGCCGCGCGATCGGCACCGTGATGAGCGGCCTGTTGCTCGGCATCCTGCTCGCACGCGTCGCATCGGGCGCGATC
GCCGACTGGCTCGGCTGGCGCGCCGTCTATGCGATCGCGGCGGCGATGGTGCTGTTGCTCGCGGGCGTGCTCGCCGCGAA
GCTGCCGAAGGACCGCCGCCATGCACGCGTCGACTACGCGGCGCTGATGCAATCGCTCGCCGCGCTCGTGCGCGCGCAGC
CGCTGATCGCGCTGCGCTGCGCATACGGCGCGCTCGTGTTCGCGTGCTTCAGCCTGCTGTGGACGGGCCTCACGTTTTTG
CTCAGCCAGCCGCCATACGGCTACACGGAAGGCCGGATCGGCCTGTTCGGAATCGTCGGCGCGGTGGGCGCGCTCGCCGC
GGCGTCGGCGGGGCGGCTCGTCGACCGCGGTCACGGCAACGCGGCCACCGGCCTGTTCGCGGCGGCGGTGCTCGCGTCGT
TCGCGGCGATCGCGGCGGGCGAGCAATCGCTCGCCGCGCTGATCGTCGGCATCCTCGTGCTCGACATCGGCGTGCAGGGC
CTGCACATCTCGAACCAGAGCGTGATCTATGCGCTCGCCGGCGACGCGCGCAGCCGCGTCACGACGATCTACCTGACGAG
CTATTTCATCGGCGGCGCGCTCGGCTCGGGCGCGGCGGGCGCCGCGTTCGGCATCGACGGCTGGCGCGGCGTCTGCATCG
CGGGCGCGATCCTGTCGGGCTCGCTCGTCGCGCTGTGGGGCGCGTCGCAGCGCGTCGGCGCGCGGCAGGCCGCGCGGTAG

Upstream 100 bases:

>100_bases
TCGGCATTCCGGCGCTTCCGGTACTTCCCGCGTTTCCAGCGCTTCGTCCGCTTCGTTCGTTGGTTTTTTTCCGACTCCCT
CCTTGTTCGCTACGCGCCTC

Downstream 100 bases:

>100_bases
CGCGGCGCCGCCGACTCGCGCAGCGGACCGTGCGACGATGCCGCGGCTCGAGAACGGGTTTCGCCCCACGCGCGGCACGC
CCCCTTTGCACCGCGTGCGC

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MNSVTAPSPALTRGMTLLFACACGIVIGNLYYSQPLLAAIAASFGRQPAELGYLVTLTQLGYAASLLVVVPLGDVVNRHT
LIVRLLVANVVALVAVASSTRYGFFVAANMCVGFVTCSTQLLVPFAASLADDGARGRAIGTVMSGLLLGILLARVASGAI
ADWLGWRAVYAIAAAMVLLLAGVLAAKLPKDRRHARVDYAALMQSLAALVRAQPLIALRCAYGALVFACFSLLWTGLTFL
LSQPPYGYTEGRIGLFGIVGAVGALAAASAGRLVDRGHGNAATGLFAAAVLASFAAIAAGEQSLAALIVGILVLDIGVQG
LHISNQSVIYALAGDARSRVTTIYLTSYFIGGALGSGAAGAAFGIDGWRGVCIAGAILSGSLVALWGASQRVGARQAAR

Sequences:

>Translated_399_residues
MNSVTAPSPALTRGMTLLFACACGIVIGNLYYSQPLLAAIAASFGRQPAELGYLVTLTQLGYAASLLVVVPLGDVVNRHT
LIVRLLVANVVALVAVASSTRYGFFVAANMCVGFVTCSTQLLVPFAASLADDGARGRAIGTVMSGLLLGILLARVASGAI
ADWLGWRAVYAIAAAMVLLLAGVLAAKLPKDRRHARVDYAALMQSLAALVRAQPLIALRCAYGALVFACFSLLWTGLTFL
LSQPPYGYTEGRIGLFGIVGAVGALAAASAGRLVDRGHGNAATGLFAAAVLASFAAIAAGEQSLAALIVGILVLDIGVQG
LHISNQSVIYALAGDARSRVTTIYLTSYFIGGALGSGAAGAAFGIDGWRGVCIAGAILSGSLVALWGASQRVGARQAAR
>Mature_399_residues
MNSVTAPSPALTRGMTLLFACACGIVIGNLYYSQPLLAAIAASFGRQPAELGYLVTLTQLGYAASLLVVVPLGDVVNRHT
LIVRLLVANVVALVAVASSTRYGFFVAANMCVGFVTCSTQLLVPFAASLADDGARGRAIGTVMSGLLLGILLARVASGAI
ADWLGWRAVYAIAAAMVLLLAGVLAAKLPKDRRHARVDYAALMQSLAALVRAQPLIALRCAYGALVFACFSLLWTGLTFL
LSQPPYGYTEGRIGLFGIVGAVGALAAASAGRLVDRGHGNAATGLFAAAVLASFAAIAAGEQSLAALIVGILVLDIGVQG
LHISNQSVIYALAGDARSRVTTIYLTSYFIGGALGSGAAGAAFGIDGWRGVCIAGAILSGSLVALWGASQRVGARQAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=388, Percent_Identity=23.9690721649485, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40696; Mature: 40696

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVTAPSPALTRGMTLLFACACGIVIGNLYYSQPLLAAIAASFGRQPAELGYLVTLTQL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GYAASLLVVVPLGDVVNRHTLIVRLLVANVVALVAVASSTRYGFFVAANMCVGFVTCSTQ
HHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LLVPFAASLADDGARGRAIGTVMSGLLLGILLARVASGAIADWLGWRAVYAIAAAMVLLL
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AGVLAAKLPKDRRHARVDYAALMQSLAALVRAQPLIALRCAYGALVFACFSLLWTGLTFL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQPPYGYTEGRIGLFGIVGAVGALAAASAGRLVDRGHGNAATGLFAAAVLASFAAIAAG
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCC
EQSLAALIVGILVLDIGVQGLHISNQSVIYALAGDARSRVTTIYLTSYFIGGALGSGAAG
HHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCHHEEEEEHHHHHHHHCCCCCCCC
AAFGIDGWRGVCIAGAILSGSLVALWGASQRVGARQAAR
CCCCCCCCCHHHHHHHHHHCCEEEEECCCHHHCHHHCCC
>Mature Secondary Structure
MNSVTAPSPALTRGMTLLFACACGIVIGNLYYSQPLLAAIAASFGRQPAELGYLVTLTQL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GYAASLLVVVPLGDVVNRHTLIVRLLVANVVALVAVASSTRYGFFVAANMCVGFVTCSTQ
HHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LLVPFAASLADDGARGRAIGTVMSGLLLGILLARVASGAIADWLGWRAVYAIAAAMVLLL
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AGVLAAKLPKDRRHARVDYAALMQSLAALVRAQPLIALRCAYGALVFACFSLLWTGLTFL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQPPYGYTEGRIGLFGIVGAVGALAAASAGRLVDRGHGNAATGLFAAAVLASFAAIAAG
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCC
EQSLAALIVGILVLDIGVQGLHISNQSVIYALAGDARSRVTTIYLTSYFIGGALGSGAAG
HHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCHHEEEEEHHHHHHHHCCCCCCCC
AAFGIDGWRGVCIAGAILSGSLVALWGASQRVGARQAAR
CCCCCCCCCHHHHHHHHHHCCEEEEECCCHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]