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The map label for this gene is ychA [C]

Identifier: 126454496

GI number: 126454496

Start: 909085

End: 909927

Strand: Direct

Name: ychA [C]

Synonym: BURPS1106A_0925

Alternate gene names: 126454496

Gene position: 909085-909927 (Clockwise)

Preceding gene: 126454372

Following gene: 126455268

Centisome position: 22.79

GC content: 68.21

Gene sequence:

>843_bases
ATGACTCGCGTTCTCGACTATTTCAGTTCGCTCGTCGCCGAAGACGAGGGCCTGCCGCTCACCGAGGCGGCGCTGTCGCT
CGCGCAGGACGTCTATCCCGACGTGGACCTGCAAGGCGTGCTCGCCGAGCTCGACGCGCTCGCCGCGCGGCTCGCGAGGC
GCTTGCCGGACGGCGCGGGCGCGAGCGACAAGCTCGCGCTGCTGAACGACTTCTTCTTTCGCGAGCTTGGCTTCGCGTGC
AACCACAACGACTACTACGATCCGGACAACAGCTACCTGAACATGGTGCTCAAGCGCCGTCGCGGGATTCCGATCACGCT
CGCGGTGCTGTATCTGGAGCTGGCCGAGCAGGTCGGCGTGCCGGCGCGCGGCGTGTCGTTTCCCGGGCATTTCCTCTTGC
GTATCGCGCTGCCGGACGGCGATTCGATTCTCGACCCGACGACCGGGCGCTCGCTGTCGGAGACGGAGCTCGTCGAGATG
CTCGAGCCGTACGTCGCGCATGCGGAGGGCGGCACGGCGAGCGTGCTGCGCGCGCTGCTGCAGCCGGCGACGGAGCGCGA
GGTCGTCGCGCGGATGCTGAACAACCTGAAGGCCGTCTATCTGCAGACGGAGCGCTGGCAGCGGCTGCTCGGCGTGCAGG
AGCGGCTCGTGATCCTGCTGCCGGGGCAACTCGACGAAGTGCGCGACCGCGGCTTCGCGTACGCGCGCCTCGACTACCTG
CGTCCCGCGCTCGAGGATCTGGAGACGTATCTGGGCGAGCGGCCCGATGCGGCCGATGCGACGATCGTCGAAGCGCAGGT
CAGCGAACTGCGCCAGCGGATGCAGCGCGACGACGACGATTGA

Upstream 100 bases:

>100_bases
CGCCTGCCTCGTTCTGTTCGCTGCACTATATTTCGGTATGTTGTGGCTGATGGGTTTCAAATACGCGTACTTCAGACGGC
GCGCCAAGTAACGGACCCCA

Downstream 100 bases:

>100_bases
GCGGCGCGGCGGCCCCTGCGGCCCGTGCGGCCGCCCGTGCGCGGTTGCGGACCGGCGAAGCCCGCTGCGCGCGGCCGCGC
GCGCTCGATCGTGCCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTRVLDYFSSLVAEDEGLPLTEAALSLAQDVYPDVDLQGVLAELDALAARLARRLPDGAGASDKLALLNDFFFRELGFAC
NHNDYYDPDNSYLNMVLKRRRGIPITLAVLYLELAEQVGVPARGVSFPGHFLLRIALPDGDSILDPTTGRSLSETELVEM
LEPYVAHAEGGTASVLRALLQPATEREVVARMLNNLKAVYLQTERWQRLLGVQERLVILLPGQLDEVRDRGFAYARLDYL
RPALEDLETYLGERPDAADATIVEAQVSELRQRMQRDDDD

Sequences:

>Translated_280_residues
MTRVLDYFSSLVAEDEGLPLTEAALSLAQDVYPDVDLQGVLAELDALAARLARRLPDGAGASDKLALLNDFFFRELGFAC
NHNDYYDPDNSYLNMVLKRRRGIPITLAVLYLELAEQVGVPARGVSFPGHFLLRIALPDGDSILDPTTGRSLSETELVEM
LEPYVAHAEGGTASVLRALLQPATEREVVARMLNNLKAVYLQTERWQRLLGVQERLVILLPGQLDEVRDRGFAYARLDYL
RPALEDLETYLGERPDAADATIVEAQVSELRQRMQRDDDD
>Mature_279_residues
TRVLDYFSSLVAEDEGLPLTEAALSLAQDVYPDVDLQGVLAELDALAARLARRLPDGAGASDKLALLNDFFFRELGFACN
HNDYYDPDNSYLNMVLKRRRGIPITLAVLYLELAEQVGVPARGVSFPGHFLLRIALPDGDSILDPTTGRSLSETELVEML
EPYVAHAEGGTASVLRALLQPATEREVVARMLNNLKAVYLQTERWQRLLGVQERLVILLPGQLDEVRDRGFAYARLDYLR
PALEDLETYLGERPDAADATIVEAQVSELRQRMQRDDDD

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306502, Length=206, Percent_Identity=29.6116504854369, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI16306500, Length=206, Percent_Identity=29.6116504854369, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1787465, Length=256, Percent_Identity=28.125, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31245; Mature: 31114

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVLDYFSSLVAEDEGLPLTEAALSLAQDVYPDVDLQGVLAELDALAARLARRLPDGAG
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
ASDKLALLNDFFFRELGFACNHNDYYDPDNSYLNMVLKRRRGIPITLAVLYLELAEQVGV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PARGVSFPGHFLLRIALPDGDSILDPTTGRSLSETELVEMLEPYVAHAEGGTASVLRALL
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
QPATEREVVARMLNNLKAVYLQTERWQRLLGVQERLVILLPGQLDEVRDRGFAYARLDYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCEEEECCCCHHHHHHCCCHHHHHHHH
RPALEDLETYLGERPDAADATIVEAQVSELRQRMQRDDDD
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRVLDYFSSLVAEDEGLPLTEAALSLAQDVYPDVDLQGVLAELDALAARLARRLPDGAG
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
ASDKLALLNDFFFRELGFACNHNDYYDPDNSYLNMVLKRRRGIPITLAVLYLELAEQVGV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PARGVSFPGHFLLRIALPDGDSILDPTTGRSLSETELVEMLEPYVAHAEGGTASVLRALL
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
QPATEREVVARMLNNLKAVYLQTERWQRLLGVQERLVILLPGQLDEVRDRGFAYARLDYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCEEEECCCCHHHHHHCCCHHHHHHHH
RPALEDLETYLGERPDAADATIVEAQVSELRQRMQRDDDD
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]