| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454486
Identifier: 126454486
GI number: 126454486
Start: 801313
End: 801924
Strand: Direct
Name: 126454486
Synonym: BURPS1106A_0816
Alternate gene names: NA
Gene position: 801313-801924 (Clockwise)
Preceding gene: 126454103
Following gene: 126451915
Centisome position: 20.09
GC content: 68.79
Gene sequence:
>612_bases ATGCCGCTATCCGAGCCCGTACCCCGACAGTTGCGCCATCGCCGCGCAATTCGAGCGGAAGCCTACGAGCGCGCCGACGG CTTGTGGGACATCGAGGCCTGCCTGACCGATCACAAGCCGCGCGACGTCTCGCTCGCGTCGGGCGTCAGGCCGAACGGCC TGCCGATCCACGAGCTGTGGCTGCGCGTGACGATCGATCGTGAACTCAATATCGTCGACGTCGACGCGTCGTCCGACTGG GTGCCCTATCCGGGTCAATGCGAAGCCGCCAAGCCCGCCTACCGCGTCCTCATCGGACTCAATCTCTTCCGCCATTTCCG TCGCGACGTGTCCCGGCTGCTGTCCGGCGTCGCCGGCTGCTCGCATCTGACCGAGCTATGCGCGGTGTTGCCGACGGCCG CGATCCAGGCGTTCGCGGGCGACGTGTGGAACGTGCAGGAGTCGTTGGGCGACGGCGCGAACGAGGGCGATCGCCCAGCC GGGCAGCCGCCGTTCCAGCTCGGCCGCTGCCACGCGCTGCGGTTCGACGGGGAAGCGGTCCGGCAGTTCTATCCGCGTTG GTACGGCGCGAGCCGCCCCGCGCGCGAGGGTGCGGACAGTGCGAAGGAATGA
Upstream 100 bases:
>100_bases CTCCCCCAAATCCCTCGAAACCCCGCACGGGGCCAGACCGGGCAGGGGCGGACGATATGCTAGAATCGCCGAGTTTCCCT CTTCGGCTTCACCTTCCCGC
Downstream 100 bases:
>100_bases GGGCGAACGCTTGAATCGTCGGAAGAAGCGATCGTCAATCGACTTTTTTTAGCCAACTCACAGACTGAAGGAATCACGCA TGAAGATTCACGAGTACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPLSEPVPRQLRHRRAIRAEAYERADGLWDIEACLTDHKPRDVSLASGVRPNGLPIHELWLRVTIDRELNIVDVDASSDW VPYPGQCEAAKPAYRVLIGLNLFRHFRRDVSRLLSGVAGCSHLTELCAVLPTAAIQAFAGDVWNVQESLGDGANEGDRPA GQPPFQLGRCHALRFDGEAVRQFYPRWYGASRPAREGADSAKE
Sequences:
>Translated_203_residues MPLSEPVPRQLRHRRAIRAEAYERADGLWDIEACLTDHKPRDVSLASGVRPNGLPIHELWLRVTIDRELNIVDVDASSDW VPYPGQCEAAKPAYRVLIGLNLFRHFRRDVSRLLSGVAGCSHLTELCAVLPTAAIQAFAGDVWNVQESLGDGANEGDRPA GQPPFQLGRCHALRFDGEAVRQFYPRWYGASRPAREGADSAKE >Mature_202_residues PLSEPVPRQLRHRRAIRAEAYERADGLWDIEACLTDHKPRDVSLASGVRPNGLPIHELWLRVTIDRELNIVDVDASSDWV PYPGQCEAAKPAYRVLIGLNLFRHFRRDVSRLLSGVAGCSHLTELCAVLPTAAIQAFAGDVWNVQESLGDGANEGDRPAG QPPFQLGRCHALRFDGEAVRQFYPRWYGASRPAREGADSAKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22577; Mature: 22445
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSEPVPRQLRHRRAIRAEAYERADGLWDIEACLTDHKPRDVSLASGVRPNGLPIHELW CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHH LRVTIDRELNIVDVDASSDWVPYPGQCEAAKPAYRVLIGLNLFRHFRRDVSRLLSGVAGC EEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHLTELCAVLPTAAIQAFAGDVWNVQESLGDGANEGDRPAGQPPFQLGRCHALRFDGEAV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCEEEEECCHHHH RQFYPRWYGASRPAREGADSAKE HHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PLSEPVPRQLRHRRAIRAEAYERADGLWDIEACLTDHKPRDVSLASGVRPNGLPIHELW CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHH LRVTIDRELNIVDVDASSDWVPYPGQCEAAKPAYRVLIGLNLFRHFRRDVSRLLSGVAGC EEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHLTELCAVLPTAAIQAFAGDVWNVQESLGDGANEGDRPAGQPPFQLGRCHALRFDGEAV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCEEEEECCHHHH RQFYPRWYGASRPAREGADSAKE HHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA