| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454436
Identifier: 126454436
GI number: 126454436
Start: 1301596
End: 1302216
Strand: Reverse
Name: 126454436
Synonym: BURPS1106A_1332
Alternate gene names: NA
Gene position: 1302216-1301596 (Counterclockwise)
Preceding gene: 126454801
Following gene: 126452371
Centisome position: 32.65
GC content: 64.57
Gene sequence:
>621_bases ATGGACAGTTTTCCCGCCTCGCTTCGCCTGCTCGGCGCGCTCGGCAAGCTGACGGCCTGTGCCGCGGGCCTGTCGCTCGT GCTCGCCGCGCCCGCGTTCGCCGACTTGCTCGATCAACGCGCCGAACTCGTCAACAAGTACGTCAACGAAATGCACGCCG ATCCGCTCGTCGCGGATTGCGCCGCGCACGGCAACTTCATCGCCAGCACGTCGAGCGCTTTCGATCACGTCGAATTTGCG CCGAACGCGTTCGACAGCGGCAGCGCATCGATCACGCCCTGGAACGATTCGTTCGACGAAGGCAAGCAGCGCGTGAAAGT CGACAACATCGTGACCGTCGAGGGCCTCGGCGTGCGCGCGAGCGGCGGCGATCCGGAACCTCTGAAGTTCCGCTGCGGCT ATGTCGGCACGCAAATGCTCGCGTTCAGTTGGAACGATCCGGTGCCACCGGCGAAGCCGCGCGTCGAGCGCGCGACGTCA TCGAAGAAGAAACTGCGCGCGCACTCGGGCAAAGGCAAGGTCAAGGCGAAAGCGACGGGCAAGAGCGGCAAGCGCGCCGT GTCGAAGAAATCGAGCACGACGAAGAAGGCCGCGAAGAAACGCTCGACGCGCAAGTCGTGA
Upstream 100 bases:
>100_bases TCTACTGCGGCGCCAAAAAATTACGCTAAGATGGAACCCTGCTCTTCATCGGGCATCTCATGTGCCTGGTGTCTCTATCG CGTTTATCTCATACCTCCAG
Downstream 100 bases:
>100_bases CGCGATCGGCCGAACGCCGGATTCCGGACGACAGGTGCCGGACCGGACCGTCGAGCGCAACCGACGCGTAGCACTCGCCG TCACCCGCCCATCCGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADCAAHGNFIASTSSAFDHVEFA PNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDPVPPAKPRVERATS SKKKLRAHSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS
Sequences:
>Translated_206_residues MDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADCAAHGNFIASTSSAFDHVEFA PNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDPVPPAKPRVERATS SKKKLRAHSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS >Mature_206_residues MDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADCAAHGNFIASTSSAFDHVEFA PNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDPVPPAKPRVERATS SKKKLRAHSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21818; Mature: 21818
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AAHGNFIASTSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRA HHCCCEEECCCCHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHEEECCCEEEECCCEEEC SGGDPEPLKFRCGYVGTQMLAFSWNDPVPPAKPRVERATSSKKKLRAHSGKGKVKAKATG CCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC KSGKRAVSKKSSTTKKAAKKRSTRKS CCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AAHGNFIASTSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRA HHCCCEEECCCCHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHEEECCCEEEECCCEEEC SGGDPEPLKFRCGYVGTQMLAFSWNDPVPPAKPRVERATSSKKKLRAHSGKGKVKAKATG CCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC KSGKRAVSKKSSTTKKAAKKRSTRKS CCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA