| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454432
Identifier: 126454432
GI number: 126454432
Start: 933122
End: 935347
Strand: Reverse
Name: 126454432
Synonym: BURPS1106A_0954
Alternate gene names: NA
Gene position: 935347-933122 (Counterclockwise)
Preceding gene: 126454785
Following gene: 126452149
Centisome position: 23.45
GC content: 71.74
Gene sequence:
>2226_bases ATGCACGCCTCGCCGCTTCGTTACACACGTCGCCACGCCCGCCGCTCCGGTTCGTTTCGACGAATGCGCCGCATGTATCC AGCCGCGGAACCGTTCGGCCGCGTTTCAAGGCTGCAACCCAAATCGGCTCGGGGCGATCGCCTGATCTCGCGATCTTCGA CACGCAGGCAGGCCAGGGGCTGCCGCCTTCAACGCTCTGACACGTTCCCGCGCAGTCGTCACCGGCGGCACGCCGATCGG TTCGACGGTCGACATGCCGCCGATTGCGCATGCGGCCAACCGACGGGCAGGCCGCAACACCGTTACGTCGACCACGCAAC GACCGCATTCGTGTCCGCGGCATCCGCAGGCGCAATCGCGCGGCACCGGGAAGGCTGGCCGGCTCCCGGCGTCGTCTCGC TGCCGAAGCGCCCGGACAACGAGCCCGATTCGGTCGGCAAGCCGCCCGGCGAGCGGATACGGTATCGCCGCGCGGTTCGT CGAATGCGCGATCGCCTCGATCCTGCTCCGCCGGCAACGCGCGGCAGGCGCGCCGGCGAGCCGCCCCTCCTCCTGACGTT TCATTTCGGAAACGAAACCGCCGCCCCGATGTTTCAGCGCTGCGTACGCGACGCGCTCACGCCTTGCGCGGCGGACATGA GCGGTCGATGGCACGGTTATCGCAGAGCAGGCTCGCACGGCGGGCTCGCGTGCCGATCGACGTTGCCGGCTGGTCATGCG CCGGTTCGCAGACGATCGGCAATTGGCAGGGCAACGCATTTTTCGGGCCCCCGCAACACGCGCAAAAGGCCGCACGGCGA TGCGGACTTCGCGCTTTGGGAGGCCGATGATGGACAAGACGAAACAACCGCCTCGCGCGGCGAAGAGATGCTGTCGCGCG ACCTTGCTGGCCGCCGCCGCATTCGCGTGCTGCTGCGGCTCGTATGCCGCCGCGCAGGAAGCCGCGTCTGCCGCGCCGAG CACGACGACGCAACCGCGCGACGAAGCGCCGTTATCCGCGCCGTTGCAAGTCGTGCAGGACGCGATATCGGCCGGCACGG CCGACGTATCGGCCAATGCATCGGCCGATGCGGACGTCGCGATGCCGCTCGCGGAAGTCGCGCCGCCCTGCTCCGCCCCG GGCGCGTGCGGCGCCGAGCTGCGCCTCGCCGGCGGCATGGGGGGGAATGGCGAGGGCGCAGGCGCGGGCGGAATCGGAAG CGGCGGCGACAACGCGGGCAGCGGCCGCGGAAGCAGCGGCGGCGCAAACGACGGGAATGGTGCCATCGGCGCTGCGGGGA TCGGCGTCGGTGGGACAACAGGCTCGACCGCGGGCGGCACGGCGGCCACCGGACGCGGCAACTCGGTAGGCAACGCATCG GGCGGCGGAACGTCGGGGGGTGGTGCGTCAGGCCATGGCACTTCGGGGCGCGGTGCTGCGGGAGGCGGCGCTTCCAGTGG CGGGGCTTCGGGTGGCGGTACTTCCGGCGGCGGTGCTTCCGGTGGCGGTACTTCGGGCGGCGGTGCTTCAGGCGGCGGTG CTTCCGGCGGCGGTGCTTCAGGCGGCGGTACTTCAGGTGGCGGTGCTTCCGGTGGCGGTACTTCGGGCGGCGGTGCTTCA GGCGGCGGTGCTTCCGGCGGCAGTGCTTCAGGCGGCGGCGCTTCCGGTGGCGGTGCTTCCGGTGGCGGTGCTTCCGGTGG CGGTACTTCGGGCGGCGGTGCTTCAGGCGGCGGTGCTTCCGGCGGCGGCGCTTCCGGTGGCGGCGCTTCCGGTGGCGGTG CTTCCGGTGGCGGTGCTTCCGGTGGCGGTGCTTCCGGTGGCGGTGCTTCAGGCGGCGGCACTTCGGGCGGCGGTACTTCG GGCGGCGGCGCTTCCGGTGGCGGTGCTTCCGGTGGCGGTGCTTCCGGCAGCGGTGCTTCCGGCAGCGGTGCTTCAGGCGG CGGTGCTTCAGGCGGCGGCGCTTCGGGCGGCGGTGCTTCAGGCGGCGGTGCTTCCGGTGGCGGTGCTTCCGGTGGCGGTA CTTCGGGCGGCGGTACTTCCGGCGGCGGTACTTCCGGTGGCGGTCCTTCCGGTGGCGGTCCTTCGGGCGGCGGTACTTCC GGTGGCGGGACTTCGGGTGGCGGTACTTCCGGTGGCGGGACTTCGGGTGGCGGTACTTCAGGCGGCGGTACTTCAGGCGG CGGTACTTCGAGTGGTGCGGGCCATGGTGGACATGGCGGTGGAACCGGTGGCGGCGGCGGCAATAG
Upstream 100 bases:
>100_bases GCGCGCCCGGCGCTACGAAGTCCGCGACGTCGCCGCTCATGCCGGCGCGCGCGCATCCCGCGCGCTCGCGCGACGGACGA TGCGAAAACGAACGCCGCGC
Downstream 100 bases:
>100_bases CGGTGGTCACGGTAACGGCAATGGCGGCGGCGCCAGTGGCGGCAGCGGCAGCGGCAACGGTCACGGCAGCGGCAATGGTG GCGGCAACGGCAACGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 741; Mature: 741
Protein sequence:
>741_residues MHASPLRYTRRHARRSGSFRRMRRMYPAAEPFGRVSRLQPKSARGDRLISRSSTRRQARGCRLQRSDTFPRSRHRRHADR FDGRHAADCACGQPTGRPQHRYVDHATTAFVSAASAGAIARHREGWPAPGVVSLPKRPDNEPDSVGKPPGERIRYRRAVR RMRDRLDPAPPATRGRRAGEPPLLLTFHFGNETAAPMFQRCVRDALTPCAADMSGRWHGYRRAGSHGGLACRSTLPAGHA PVRRRSAIGRATHFSGPRNTRKRPHGDADFALWEADDGQDETTASRGEEMLSRDLAGRRRIRVLLRLVCRRAGSRVCRAE HDDATARRSAVIRAVASRAGRDIGRHGRRIGQCIGRCGRRDAARGSRAALLRPGRVRRRAAPRRRHGGEWRGRRRGRNRK RRRQRGQRPRKQRRRKRREWCHRRCGDRRRWDNRLDRGRHGGHRTRQLGRQRIGRRNVGGWCVRPWHFGARCCGRRRFQW RGFGWRYFRRRCFRWRYFGRRCFRRRCFRRRCFRRRYFRWRCFRWRYFGRRCFRRRCFRRQCFRRRRFRWRCFRWRCFRW RYFGRRCFRRRCFRRRRFRWRRFRWRCFRWRCFRWRCFRWRCFRRRHFGRRYFGRRRFRWRCFRWRCFRQRCFRQRCFRR RCFRRRRFGRRCFRRRCFRWRCFRWRYFGRRYFRRRYFRWRSFRWRSFGRRYFRWRDFGWRYFRWRDFGWRYFRRRYFRR RYFEWCGPWWTWRWNRWRRRQ
Sequences:
>Translated_741_residues MHASPLRYTRRHARRSGSFRRMRRMYPAAEPFGRVSRLQPKSARGDRLISRSSTRRQARGCRLQRSDTFPRSRHRRHADR FDGRHAADCACGQPTGRPQHRYVDHATTAFVSAASAGAIARHREGWPAPGVVSLPKRPDNEPDSVGKPPGERIRYRRAVR RMRDRLDPAPPATRGRRAGEPPLLLTFHFGNETAAPMFQRCVRDALTPCAADMSGRWHGYRRAGSHGGLACRSTLPAGHA PVRRRSAIGRATHFSGPRNTRKRPHGDADFALWEADDGQDETTASRGEEMLSRDLAGRRRIRVLLRLVCRRAGSRVCRAE HDDATARRSAVIRAVASRAGRDIGRHGRRIGQCIGRCGRRDAARGSRAALLRPGRVRRRAAPRRRHGGEWRGRRRGRNRK RRRQRGQRPRKQRRRKRREWCHRRCGDRRRWDNRLDRGRHGGHRTRQLGRQRIGRRNVGGWCVRPWHFGARCCGRRRFQW RGFGWRYFRRRCFRWRYFGRRCFRRRCFRRRCFRRRYFRWRCFRWRYFGRRCFRRRCFRRQCFRRRRFRWRCFRWRCFRW RYFGRRCFRRRCFRRRRFRWRRFRWRCFRWRCFRWRCFRWRCFRRRHFGRRYFGRRRFRWRCFRWRCFRQRCFRQRCFRR RCFRRRRFGRRCFRRRCFRWRCFRWRYFGRRYFRRRYFRWRSFRWRSFGRRYFRWRDFGWRYFRWRDFGWRYFRRRYFRR RYFEWCGPWWTWRWNRWRRRQ >Mature_741_residues MHASPLRYTRRHARRSGSFRRMRRMYPAAEPFGRVSRLQPKSARGDRLISRSSTRRQARGCRLQRSDTFPRSRHRRHADR FDGRHAADCACGQPTGRPQHRYVDHATTAFVSAASAGAIARHREGWPAPGVVSLPKRPDNEPDSVGKPPGERIRYRRAVR RMRDRLDPAPPATRGRRAGEPPLLLTFHFGNETAAPMFQRCVRDALTPCAADMSGRWHGYRRAGSHGGLACRSTLPAGHA PVRRRSAIGRATHFSGPRNTRKRPHGDADFALWEADDGQDETTASRGEEMLSRDLAGRRRIRVLLRLVCRRAGSRVCRAE HDDATARRSAVIRAVASRAGRDIGRHGRRIGQCIGRCGRRDAARGSRAALLRPGRVRRRAAPRRRHGGEWRGRRRGRNRK RRRQRGQRPRKQRRRKRREWCHRRCGDRRRWDNRLDRGRHGGHRTRQLGRQRIGRRNVGGWCVRPWHFGARCCGRRRFQW RGFGWRYFRRRCFRWRYFGRRCFRRRCFRRRCFRRRYFRWRCFRWRYFGRRCFRRRCFRRQCFRRRRFRWRCFRWRCFRW RYFGRRCFRRRCFRRRRFRWRRFRWRCFRWRCFRWRCFRWRCFRRRHFGRRYFGRRRFRWRCFRWRCFRQRCFRQRCFRR RCFRRRRFGRRCFRRRCFRWRCFRWRYFGRRYFRRRYFRWRSFRWRSFGRRYFRWRDFGWRYFRWRDFGWRYFRRRYFRR RYFEWCGPWWTWRWNRWRRRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93416; Mature: 93416
Theoretical pI: Translated: 12.64; Mature: 12.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHASPLRYTRRHARRSGSFRRMRRMYPAAEPFGRVSRLQPKSARGDRLISRSSTRRQARG CCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHC CRLQRSDTFPRSRHRRHADRFDGRHAADCACGQPTGRPQHRYVDHATTAFVSAASAGAIA CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RHREGWPAPGVVSLPKRPDNEPDSVGKPPGERIRYRRAVRRMRDRLDPAPPATRGRRAGE HHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PPLLLTFHFGNETAAPMFQRCVRDALTPCAADMSGRWHGYRRAGSHGGLACRSTLPAGHA CCEEEEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCHHHCCCCCCEEECCCCCCCCC PVRRRSAIGRATHFSGPRNTRKRPHGDADFALWEADDGQDETTASRGEEMLSRDLAGRRR CHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH IRVLLRLVCRRAGSRVCRAEHDDATARRSAVIRAVASRAGRDIGRHGRRIGQCIGRCGRR HHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DAARGSRAALLRPGRVRRRAAPRRRHGGEWRGRRRGRNRKRRRQRGQRPRKQRRRKRREW HHCCCCCHHHCCCHHHHHHCCCHHHCCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH CHRRCGDRRRWDNRLDRGRHGGHRTRQLGRQRIGRRNVGGWCVRPWHFGARCCGRRRFQW HHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHCCCCCC RGFGWRYFRRRCFRWRYFGRRCFRRRCFRRRCFRRRYFRWRCFRWRYFGRRCFRRRCFRR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QCFRRRRFRWRCFRWRCFRWRYFGRRCFRRRCFRRRRFRWRRFRWRCFRWRCFRWRCFRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCFRRRHFGRRYFGRRRFRWRCFRWRCFRQRCFRQRCFRRRCFRRRRFGRRCFRRRCFRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCFRWRYFGRRYFRRRYFRWRSFRWRSFGRRYFRWRDFGWRYFRWRDFGWRYFRRRYFRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH RYFEWCGPWWTWRWNRWRRRQ HHHHHHCCCEEECCCHHCCCC >Mature Secondary Structure MHASPLRYTRRHARRSGSFRRMRRMYPAAEPFGRVSRLQPKSARGDRLISRSSTRRQARG CCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHC CRLQRSDTFPRSRHRRHADRFDGRHAADCACGQPTGRPQHRYVDHATTAFVSAASAGAIA CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RHREGWPAPGVVSLPKRPDNEPDSVGKPPGERIRYRRAVRRMRDRLDPAPPATRGRRAGE HHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PPLLLTFHFGNETAAPMFQRCVRDALTPCAADMSGRWHGYRRAGSHGGLACRSTLPAGHA CCEEEEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCHHHCCCCCCEEECCCCCCCCC PVRRRSAIGRATHFSGPRNTRKRPHGDADFALWEADDGQDETTASRGEEMLSRDLAGRRR CHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH IRVLLRLVCRRAGSRVCRAEHDDATARRSAVIRAVASRAGRDIGRHGRRIGQCIGRCGRR HHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DAARGSRAALLRPGRVRRRAAPRRRHGGEWRGRRRGRNRKRRRQRGQRPRKQRRRKRREW HHCCCCCHHHCCCHHHHHHCCCHHHCCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH CHRRCGDRRRWDNRLDRGRHGGHRTRQLGRQRIGRRNVGGWCVRPWHFGARCCGRRRFQW HHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHCCCCCC RGFGWRYFRRRCFRWRYFGRRCFRRRCFRRRCFRRRYFRWRCFRWRYFGRRCFRRRCFRR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QCFRRRRFRWRCFRWRCFRWRYFGRRCFRRRCFRRRRFRWRRFRWRCFRWRCFRWRCFRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCFRRRHFGRRYFGRRRFRWRCFRWRCFRQRCFRQRCFRRRCFRRRRFGRRCFRRRCFRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCFRWRYFGRRYFRRRYFRWRSFRWRSFGRRYFRWRDFGWRYFRWRDFGWRYFRRRYFRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH RYFEWCGPWWTWRWNRWRRRQ HHHHHHCCCEEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA