Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126454416

Identifier: 126454416

GI number: 126454416

Start: 3939659

End: 3939841

Strand: Reverse

Name: 126454416

Synonym: BURPS1106A_4033

Alternate gene names: NA

Gene position: 3939841-3939659 (Counterclockwise)

Preceding gene: 126455110

Following gene: 126455316

Centisome position: 98.78

GC content: 53.55

Gene sequence:

>183_bases
ATGCCGATCACTACCCATCCATCCATCTACGTTCTCCTTCGCGTCCGCGGGCAGCGGGCGCACGCGAATCCGATATCACG
CCAGATTGCCATGGAAATCGAGCCGGTAGAACTGACAGGATCAGGGAAAATACCGATCGTTCAAAGTAGTGCGGGCCGGC
TGTCTTTTTTGGTAAATGATTGA

Upstream 100 bases:

>100_bases
GTCCTTCTTCACGCGTTGCGCACATCCGAGCGCCTGGAAAAACACCGCCGACGCGCGGTGCACGAATACGATCGCGCCCG
CGATCCACGCGGCGAGCACG

Downstream 100 bases:

>100_bases
TAGTAAAGGAGATATATGGGGTGCAACCGGGTGTGAAATCTGGTTGCACCTTTTTATTGCCTGCCTTACGATTTTGCGAT
CTTTTAAAGTCCTTGGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MPITTHPSIYVLLRVRGQRAHANPISRQIAMEIEPVELTGSGKIPIVQSSAGRLSFLVND

Sequences:

>Translated_60_residues
MPITTHPSIYVLLRVRGQRAHANPISRQIAMEIEPVELTGSGKIPIVQSSAGRLSFLVND
>Mature_59_residues
PITTHPSIYVLLRVRGQRAHANPISRQIAMEIEPVELTGSGKIPIVQSSAGRLSFLVND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6567; Mature: 6436

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITTHPSIYVLLRVRGQRAHANPISRQIAMEIEPVELTGSGKIPIVQSSAGRLSFLVND
CCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECEEEEECCCCCEEEECCCCEEEEEEEC
>Mature Secondary Structure 
PITTHPSIYVLLRVRGQRAHANPISRQIAMEIEPVELTGSGKIPIVQSSAGRLSFLVND
CCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECEEEEECCCCCEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA