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The map label for this gene is ssuC [C]

Identifier: 126454363

GI number: 126454363

Start: 1837607

End: 1838578

Strand: Direct

Name: ssuC [C]

Synonym: BURPS1106A_1881

Alternate gene names: 126454363

Gene position: 1837607-1838578 (Clockwise)

Preceding gene: 126455247

Following gene: 126454658

Centisome position: 46.07

GC content: 72.74

Gene sequence:

>972_bases
ATGAGCGCGGCCCCGCGCATCGCGCCACCGGTGCGCGACGAGTACGAGCTCGCGCTCGCGCCGGCCGCGTCGATCGACGC
GATCGCCCCGGCTGCCGGGATCGCGGCGGCGCGAGCCGGCGATCCGGCCGCCGGCGCGGGCGAGTGCGGCCGCGCCGCGC
CGCTCGCGCGCCTGTACGCGCGGCTTGGAGTGCGACGCCTGCGCGACGCGCAATGGCTGCGCAAGACGGCGCTCGCGCTC
GCGCTGATCGCCGCGTGGGAAATCGTCGCGCGCGTGGTCGACGACGATCTGCTGCTGCCGAGCTTCGGCGCGACCGCGCT
TGCGTTCGCGCACGGCGTCGCGAACGGCGAGCTGCCGGCGAAGATCGCGGTATCGCTGTCGATGCTGCTGCGCGGCTATG
CGCTCGGCGTGGCGCTCGCGTTCGCGCTGACCGCGCTCGCGGCGACGACGCGCCTCGGTCGCGATCTGCTGACGATGCTC
ACCGCGATGTTCAATCCGCTGCCGTCGATCGCGCTGCTGCCGCTTGCGCTGCTGTGGTTCGGCCTCGGCACGGGCAGCCT
GCTGTTCGTGCTCGTGCATGCGGTGCTCTGGCCGCTCGCGCTGAGCACGTTCGCGGGTTTTCAGGCCGTGCCGGCGACGC
TCAGGATGGTCGGGCGCAATTATGGGCTGACGGGCGTGCGCCACGTCGTCGCGATCCTGGTGCCGGCCGCGCTGCCTTCG
ATTCTCGCGGGCCTGAAGGTCGCCTGGGCGTTCGCGTGGCGCACGCTGATCGCGGCCGAGCTCGTGTTCGGCGCGAGCGC
GGGCGGCGGCGGGCTCGGCTGGTACATCTTCCAGAACCGCAACGAGCTCTACACGGACCGCGTGTTCGCCGGCCTCGCCG
CGGTGATCGCGATCGGGCTTGTCGTCGAGCATGGCGTGTTCGACGCGCTCGAACGCGTGAGCGTCAAGCGCTGGGGCGCG
CATACGCTGTAG

Upstream 100 bases:

>100_bases
ACAGCCATCATTTCGACGAGCGCAGCGTCGGGCGTGCGGATTTCCAGCGGACGGCGGAGCGGATCCAGCGGCTGCTGTTC
GACGAAAGCGGGGCGCGCGC

Downstream 100 bases:

>100_bases
CGCGCCCGCGCAGGTGCAGGCGCAGGCGCAGGCGCGGGCCACGGCCGGCAACGGGTCGAACGGCCAAGCAAACTGCCGAG
CGAGCGGCTGGGGCATGCGG

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSAAPRIAPPVRDEYELALAPAASIDAIAPAAGIAAARAGDPAAGAGECGRAAPLARLYARLGVRRLRDAQWLRKTALAL
ALIAAWEIVARVVDDDLLLPSFGATALAFAHGVANGELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTML
TAMFNPLPSIALLPLALLWFGLGTGSLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPS
ILAGLKVAWAFAWRTLIAAELVFGASAGGGGLGWYIFQNRNELYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKRWGA
HTL

Sequences:

>Translated_323_residues
MSAAPRIAPPVRDEYELALAPAASIDAIAPAAGIAAARAGDPAAGAGECGRAAPLARLYARLGVRRLRDAQWLRKTALAL
ALIAAWEIVARVVDDDLLLPSFGATALAFAHGVANGELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTML
TAMFNPLPSIALLPLALLWFGLGTGSLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPS
ILAGLKVAWAFAWRTLIAAELVFGASAGGGGLGWYIFQNRNELYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKRWGA
HTL
>Mature_322_residues
SAAPRIAPPVRDEYELALAPAASIDAIAPAAGIAAARAGDPAAGAGECGRAAPLARLYARLGVRRLRDAQWLRKTALALA
LIAAWEIVARVVDDDLLLPSFGATALAFAHGVANGELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLT
AMFNPLPSIALLPLALLWFGLGTGSLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSI
LAGLKVAWAFAWRTLIAAELVFGASAGGGGLGWYIFQNRNELYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKRWGAH
TL

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=222, Percent_Identity=31.0810810810811, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1786564, Length=184, Percent_Identity=31.5217391304348, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33693; Mature: 33562

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPRIAPPVRDEYELALAPAASIDAIAPAAGIAAARAGDPAAGAGECGRAAPLARLYA
CCCCCCCCCCCCCCHHEEECCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
RLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAHGVANGELPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCH
KIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPLALLWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GLGTGSLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPS
HCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ILAGLKVAWAFAWRTLIAAELVFGASAGGGGLGWYIFQNRNELYTDRVFAGLAAVIAIGL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
VVEHGVFDALERVSVKRWGAHTL
HHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SAAPRIAPPVRDEYELALAPAASIDAIAPAAGIAAARAGDPAAGAGECGRAAPLARLYA
CCCCCCCCCCCCCHHEEECCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
RLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAHGVANGELPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCH
KIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPLALLWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GLGTGSLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPS
HCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ILAGLKVAWAFAWRTLIAAELVFGASAGGGGLGWYIFQNRNELYTDRVFAGLAAVIAIGL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
VVEHGVFDALERVSVKRWGAHTL
HHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]